Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30e02
(730 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0091 + 13312904-13313647 37 0.014
02_01_0297 + 1986422-1986570,1986960-1987065,1987188-1987464,198... 35 0.058
03_03_0132 + 14711645-14711839,14712641-14712970,14713689-147137... 32 0.41
12_02_0674 - 21745321-21746223,21746229-21747608 31 0.94
09_01_0016 - 376742-376883,377973-378964 30 2.2
08_02_0359 - 16183442-16183555,16183715-16183815,16185573-161856... 30 2.2
07_03_1160 - 24430240-24431268 30 2.2
04_04_0937 - 29515561-29515758,29515914-29516301,29516925-295170... 30 2.2
07_03_0089 - 13300902-13301645 29 3.8
07_03_0910 - 22519006-22519159,22519300-22519355,22519433-225197... 29 5.0
07_01_0775 + 5976883-5978109 29 5.0
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 29 5.0
04_03_0548 - 17035394-17035749,17035761-17036295,17036325-170364... 29 5.0
02_01_0434 + 3158637-3159319,3159460-3159576,3160064-3160226,316... 29 5.0
09_06_0332 + 22382508-22383214,22383576-22383631,22383673-223840... 28 6.6
07_03_1557 - 27699675-27699972,27700546-27700630,27700741-277008... 28 6.6
07_01_0505 - 3759254-3759490,3759846-3759989,3760135-3760347,376... 28 6.6
05_04_0452 - 21373876-21375531 28 6.6
04_01_0523 - 6875349-6875444,6876284-6876346,6876431-6876474,687... 28 6.6
04_01_0203 + 2432745-2433642,2433723-2433806,2434458-2434471 28 8.7
02_05_0965 + 33136373-33136512,33136595-33136688,33136845-331368... 28 8.7
>07_03_0091 + 13312904-13313647
Length = 247
Score = 37.1 bits (82), Expect = 0.014
Identities = 28/84 (33%), Positives = 36/84 (42%)
Frame = +1
Query: 400 QSNGKRDYVSPQFTTPKPSSGQTLIPQSTRNPNHNPSSSTRGITPLSPTTKVQPNHQTTG 579
Q N K+D PQ P+P TL P ++P NP + + L P QPN Q +
Sbjct: 113 QPNPKQD---PQ-PNPQPDPKPTLQPNPKQDPQPNPQPNPKPTPQLDPKQDPQPNPQPSP 168
Query: 580 KVKDLIHFYDGKSKDQNAPQPIPS 651
K D K + PQP PS
Sbjct: 169 KA-------DPKPNPKPKPQPEPS 185
Score = 31.1 bits (67), Expect = 0.94
Identities = 20/69 (28%), Positives = 27/69 (39%)
Frame = +1
Query: 442 TPKPSSGQTLIPQSTRNPNHNPSSSTRGITPLSPTTKVQPNHQTTGKVKDLIHFYDGKSK 621
+P+P T P ++P NP + +P QPN Q K + D K
Sbjct: 103 SPQPDPKPTPQPNPKQDPQPNPQPDPKPTLQPNPKQDPQPNPQPNPKPTPQL---DPKQD 159
Query: 622 DQNAPQPIP 648
Q PQP P
Sbjct: 160 PQPNPQPSP 168
>02_01_0297 +
1986422-1986570,1986960-1987065,1987188-1987464,
1987805-1988305,1989010-1990016,1990131-1990781,
1991337-1991633,1991735-1992013,1993070-1993198,
1993291-1993491,1993651-1993793,1993878-1994190,
1994349-1994488,1995320-1995398,1995484-1995753,
1996208-1996425,1996521-1996632
Length = 1623
Score = 35.1 bits (77), Expect = 0.058
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +1
Query: 313 NGKNNYNSQFPQLGSTHKSQHTNTNQ----QSLQSNGKRDYVSPQFTTPKPSSGQTLIPQ 480
N +N N Q P+ ++ T QS N + YV+ T PSSG T++PQ
Sbjct: 111 NQQNQQNQQMPRQMASSSGYGTMIPTPGITQSATGNSRMPYVTDN--TGLPSSGATMVPQ 168
Query: 481 STRNPNHNPSSSTRGITPLSPTTKVQPNHQTTGKV 585
P S + G L TT V P + TT +
Sbjct: 169 GANTGTSLPGSMSNGYQHL--TTSV-PLNSTTSSI 200
>03_03_0132 +
14711645-14711839,14712641-14712970,14713689-14713751,
14713833-14713906,14714004-14714099,14714705-14714759,
14714867-14714971,14715054-14715135,14715450-14715562,
14715717-14716118
Length = 504
Score = 32.3 bits (70), Expect = 0.41
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 5/113 (4%)
Frame = +1
Query: 367 SQHTNTNQQSLQSNGKRDYVSPQFT---TPKPSSGQTLIPQSTRNPNHNPSSSTRGITPL 537
S+HT+ N ++ S+ RDY PQ P+P +P ++ NP +
Sbjct: 363 SRHTDLNVKA-HSDKSRDYTIPQGAMQAVPQPPG----VPTTSAGWQGNPQAGGA----Y 413
Query: 538 SPTTKVQPNHQTTGKVKDLIHFYDGKSKDQNAPQPIPS--YSSILQGTGNNNF 690
+P PNH TTG+V ++ G S AP P YSS +Q + F
Sbjct: 414 APPGAAAPNHGTTGQVP---NWNPGNSGYAPAPGAYPGQMYSSPMQYGASGGF 463
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 31.1 bits (67), Expect = 0.94
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Frame = +1
Query: 250 SGGIPNTPKRDNLPTNTN-IETNGKNN-YNSQFPQLGSTHKSQHTNTNQQSLQSNGKRDY 423
+G IP+TP+ + L T T+ I + + + +S ++ ST + +T + S
Sbjct: 521 TGKIPSTPRTNPLSTATSKIPSTPRTSLLSSSTSKIPSTPSTCELSTATGKIPST---TC 577
Query: 424 VSPQFT-TPKPSSGQTLIPQSTRNPNHNPSSSTRGITPLSPTTKVQPNHQTTGKV 585
SP T T K SS + P ST + + +SST +PLS +T P TG++
Sbjct: 578 TSPLSTATGKTSSTPSTSPLST---STSKTSSTPSTSPLSSSTIKIPTTARTGEL 629
>09_01_0016 - 376742-376883,377973-378964
Length = 377
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Frame = +1
Query: 385 NQQSLQSNG----KRDYVSPQFTTPKPSSGQTLIPQSTRNPNHNPSSSTRGITPLSPTTK 552
+ + L S+G K +V+P P P Q + + +P+ P++S ++PL P +
Sbjct: 41 SSEELDSHGAPTKKAPFVAPPPPPPPPPPPQQNGKEVSDSPSL-PTNSAIVLSPLPPPLQ 99
Query: 553 VQPNHQTTGKVKDLIHFYDGKSKDQNAPQPIPSYSSILQGTGNN 684
NHQ D D + P P+P+ ++I+ NN
Sbjct: 100 ANKNHQDQDSESD-------SDSDDDEP-PLPTNNAIVLAPPNN 135
>08_02_0359 -
16183442-16183555,16183715-16183815,16185573-16185664,
16186276-16186319
Length = 116
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 343 PQLGSTHKSQHTNTNQQSLQSNGKRDYVSPQFTTPKPSSGQ 465
PQ GS +HT+T+ + G + +++P+ +P +GQ
Sbjct: 24 PQGGSGASKRHTDTHHEVTNLPGSKGFLTPRNNNQQPYNGQ 64
>07_03_1160 - 24430240-24431268
Length = 342
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +1
Query: 430 PQFTTPKPSSGQTLI--PQSTRNPNHNPSSSTRGITPLSPTTKVQP 561
P + PKP L+ P NPN P T G+ PL P V P
Sbjct: 38 PPYDYPKPDQPPPLLPTPDVVPNPNQPPLQPTPGVPPL-PNPDVPP 82
>04_04_0937 -
29515561-29515758,29515914-29516301,29516925-29517091,
29517577-29517783
Length = 319
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +1
Query: 241 LHESGGIPNTPKRDNLPTNTNIETNGKNNYNSQFPQLGSTHKSQHTNTNQQSLQSNGKRD 420
+++ G+P+ K ++ T +E + NN N + S+ ++ + Q L SN
Sbjct: 228 VYQKDGVPSRVKAEHEALQTRLEAS--NNVN----KFSSSQRNMQLSDRQLRLSSNESSG 281
Query: 421 YVSPQFT-TPKPSSGQTLIPQSTRNPNHNPSSST 519
+ T K +GQ + R+P++N S +
Sbjct: 282 SRQNSLSGTVKNQNGQPTLESEKRSPDNNSQSKS 315
>07_03_0089 - 13300902-13301645
Length = 247
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/69 (28%), Positives = 26/69 (37%)
Frame = +1
Query: 445 PKPSSGQTLIPQSTRNPNHNPSSSTRGITPLSPTTKVQPNHQTTGKVKDLIHFYDGKSKD 624
P+P T P ++P NP + P QPN Q + K D K
Sbjct: 124 PQPDPKPTPQPNPKQDPQPNPQPDPKPTPQPDPKQDPQPNPQPSPKA-------DPKPNP 176
Query: 625 QNAPQPIPS 651
+ PQP PS
Sbjct: 177 KPKPQPEPS 185
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/69 (28%), Positives = 26/69 (37%)
Frame = +1
Query: 442 TPKPSSGQTLIPQSTRNPNHNPSSSTRGITPLSPTTKVQPNHQTTGKVKDLIHFYDGKSK 621
+P+P T P ++P NP + +P QPN Q K D K
Sbjct: 103 SPQPDPKPTPQPDPKQDPQPNPQPDPKPTPQPNPKQDPQPNPQPDPKPTPQ---PDPKQD 159
Query: 622 DQNAPQPIP 648
Q PQP P
Sbjct: 160 PQPNPQPSP 168
>07_03_0910 -
22519006-22519159,22519300-22519355,22519433-22519702,
22519808-22519986,22520146-22520374,22520985-22521180,
22521728-22521818,22521921-22521975,22522812-22522902,
22523366-22523424,22524000-22524050
Length = 476
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 619 KDQNAPQPIPSYSSILQGTGNNNFPTSG 702
K NAPQ IP +S+L G G+N P +G
Sbjct: 354 KAGNAPQMIPGNASLLNGNGSN--PANG 379
>07_01_0775 + 5976883-5978109
Length = 408
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +1
Query: 361 HKSQHTNTNQQSLQSNGKRD--YVSPQFTTPKPSSGQTLIPQSTRNPNH 501
H S TNT +++ + + + D + S +T K S L+P S+ N NH
Sbjct: 17 HCSSSTNTKKRACRESEEEDERHCSSNSSTKKKSLKLGLVPFSSHNHNH 65
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +1
Query: 427 SPQFTTPKPSSGQTLIPQSTRNPNHNPSSSTRGITPLSPT-TKVQPNHQTTGKVKDLIHF 603
SP ++ P T S +P++NP+S + +P SP+ + P++ +
Sbjct: 1673 SPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPS---- 1728
Query: 604 YDGKSKDQNAPQPIPSYS 657
Y S N PSYS
Sbjct: 1729 YSPTSPSYNYSPTSPSYS 1746
>04_03_0548 -
17035394-17035749,17035761-17036295,17036325-17036458,
17037053-17037134
Length = 368
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/83 (24%), Positives = 36/83 (43%)
Frame = +1
Query: 244 HESGGIPNTPKRDNLPTNTNIETNGKNNYNSQFPQLGSTHKSQHTNTNQQSLQSNGKRDY 423
+ESG IP P+ GK+ + +P ST ++ +++ SN +
Sbjct: 138 NESGRIPRQPESSVENVKVITMRGGKSTRDLPYPNRAST-----SSITREAPSSNTADEE 192
Query: 424 VSPQFTTPKPSSGQTLIPQSTRN 492
V P+ T P+ L+P + R+
Sbjct: 193 VQPKKTVPQEYCDTRLLPLTQRS 215
>02_01_0434 +
3158637-3159319,3159460-3159576,3160064-3160226,
3160394-3160600
Length = 389
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 487 RNPNHNPSSSTRGITPLSPTTKVQPNHQT 573
R+P+ +P +TR ++P P K++P H T
Sbjct: 189 RSPSPSPVFTTRPMSPTPPMQKLKPAHTT 217
>09_06_0332 +
22382508-22383214,22383576-22383631,22383673-22384004,
22384395-22384445
Length = 381
Score = 28.3 bits (60), Expect = 6.6
Identities = 29/99 (29%), Positives = 38/99 (38%), Gaps = 16/99 (16%)
Frame = +1
Query: 325 NYNSQFPQLGSTHKSQHTNTNQQSL-----------QSNGKRDYVSPQFTTPKP-SSGQT 468
NYN++FPQLGS QS+ QS Y P + P P S G
Sbjct: 268 NYNTEFPQLGSHGSPVPVEQQPQSIAQHIPGPWSPAQSPNAIGYRPPDGSMPPPYSPGHA 327
Query: 469 LIPQSTRNPNHNPSS----STRGITPLSPTTKVQPNHQT 573
P + H P S G+T + P ++P QT
Sbjct: 328 GAPIRSSVFMHTPQQFAMPSRPGVTYVHPQEPMRPFAQT 366
>07_03_1557 -
27699675-27699972,27700546-27700630,27700741-27700847,
27700942-27701135,27701252-27701368,27701466-27701631,
27701723-27701887,27702185-27703428
Length = 791
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 373 HTNTNQQSLQSNGKRDYVSPQFTTPKPSSGQTLIPQSTRNPNHNP 507
H N++ L S G DY + +TP+ S G + Q +PN P
Sbjct: 653 HFRGNREKLLSEGSTDYDINKISTPRLSRGN--VDQCLTDPNRWP 695
>07_01_0505 -
3759254-3759490,3759846-3759989,3760135-3760347,
3760439-3760990,3761339-3761806,3761959-3762023,
3762133-3762265,3763798-3764022
Length = 678
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 513 QHTRYNPSVSYY*SPT-KPSNNRKSERPHTL 602
QH +Y P+ + + T KPSNN K+E P L
Sbjct: 169 QHYQYQPTYNKQQNTTGKPSNNGKTENPAAL 199
>05_04_0452 - 21373876-21375531
Length = 551
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +2
Query: 266 IHRKEIIYRLIQTSKRMVKIIITLNFHS*VRRT-RANIQIQTSNLYSRTVKEIMYLHNLQ 442
+H + R+ Q+S +I+ N H V R Q++ NL+ Y N Q
Sbjct: 33 VHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPNLHLHNAMIKAYAQNHQ 92
Query: 443 HRSPVPV 463
HR V V
Sbjct: 93 HRDAVAV 99
>04_01_0523 -
6875349-6875444,6876284-6876346,6876431-6876474,
6876578-6876707
Length = 110
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 393 LLVCICMLALVRRT*LWKLRVIIIFTI 313
+L C C LA++RRT W ++ +F I
Sbjct: 61 ILPCACFLAILRRTVTWYQVLLCVFII 87
>04_01_0203 + 2432745-2433642,2433723-2433806,2434458-2434471
Length = 331
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +1
Query: 343 PQLGSTHKSQHTNTNQQSLQSN--GKRDYVS-PQFTTPKPSSGQTLIPQSTRNPNHNPSS 513
P+L S+ QH TN+ L S+ + D + P+ + SG + P+S N
Sbjct: 191 PELPSSVAVQHDQTNKPELPSSVAVQHDQTNKPELPSSVAESGGIVSPKSPEKTNEQ-IV 249
Query: 514 STRGITPLSPTTKVQPN-HQTTGK 582
+ + P++P T VQ + H+++ +
Sbjct: 250 NKKNEPPVAPGTTVQDDTHKSSNQ 273
>02_05_0965 +
33136373-33136512,33136595-33136688,33136845-33136889,
33137007-33137174,33137247-33137331,33137531-33137637,
33137918-33137998,33138232-33138284,33138361-33138460,
33138911-33139054,33139268-33139364,33139528-33139611,
33139904-33140123,33140204-33140297,33140406-33140975,
33141348-33141449,33141564-33141656,33141834-33141836
Length = 759
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 394 IAGLYLYVGSCASNLTVEIESYNYFY 317
I G++LYV S S+ VE E Y + Y
Sbjct: 560 IMGIFLYVSSLGSSSFVEEEQYTWHY 585
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.132 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,890,155
Number of Sequences: 37544
Number of extensions: 431179
Number of successful extensions: 1381
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1369
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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