Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30d24
(712 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0043 + 343777-343953,345198-346716,346831-346977,347378-34... 42 4e-04
10_06_0171 + 11466934-11466990,11467073-11468312,11468450-114685... 40 0.001
02_02_0162 + 7315562-7315846,7316432-7316662,7317002-7317144,731... 39 0.005
03_05_0618 + 26177743-26178420,26179477-26179617 38 0.008
03_02_0199 - 6347980-6348225,6348300-6348341,6348824-6348978,634... 38 0.010
05_05_0382 + 24547680-24548760,24548887-24549033,24549389-24550023 33 0.30
06_03_1056 + 27239176-27242361 32 0.39
06_03_0912 + 25896152-25896451,25896528-25897296,25897492-258976... 32 0.39
10_07_0053 - 12406958-12407011,12407012-12407168,12407280-124074... 32 0.52
01_07_0302 - 42611150-42611812,42611881-42611961,42612064-426121... 32 0.52
11_06_0440 - 23567567-23567952,23568192-23569875,23583064-23584215 30 2.1
10_08_0333 - 16850267-16851802 30 2.1
04_04_1376 + 33058306-33059763,33059851-33059991,33060594-330606... 29 2.8
10_05_0113 + 9280756-9283489,9283726-9284048,9284201-9284314 28 6.4
02_04_0572 + 23972319-23973683 28 6.4
01_06_0664 + 30999365-31002089,31002220-31002686 28 6.4
>07_01_0043 +
343777-343953,345198-346716,346831-346977,347378-347940
Length = 801
Score = 42.3 bits (95), Expect = 4e-04
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Frame = +3
Query: 165 LEEIALHQENIEKIEFLQDWCPKLKILLMQSNLIAKI-EXXXXXXXXXXXXXXXXXIEVI 341
L ++L + NI IE L++ +L++L + N I++I I +
Sbjct: 577 LHMLSLSKNNISTIEGLRE-LTRLRLLDISYNRISRIGHGLASCSSLKELYLGGNKISEV 635
Query: 342 ENLERCESLRKLDLTLNFIGDIVSVETLMGNY-SLESLYLTGNPC---TDYDNYKNFVIG 509
+ L R L+ LDL N I + L NY SLE++ L GNP ++ K +++G
Sbjct: 636 DGLHRLLKLKVLDLRHNKISTSKGLGQLAANYSSLEAVNLDGNPAQKNVGDEHLKKYLVG 695
Query: 510 TLPQL 524
LP L
Sbjct: 696 LLPNL 700
>10_06_0171 +
11466934-11466990,11467073-11468312,11468450-11468596,
11469650-11470140
Length = 644
Score = 40.3 bits (90), Expect = 0.001
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 5/134 (3%)
Frame = +3
Query: 165 LEEIALHQENIEKIEFLQDWCPKLKILLMQSNLIAKI-EXXXXXXXXXXXXXXXXXIEVI 341
L + L + I IE L++ KL++L + N I++I I +
Sbjct: 444 LHSLDLSRNKIANIEGLRE-LTKLRVLNLSYNRISRIGHGLSGCTALRELYLAGNKISDV 502
Query: 342 ENLERCESLRKLDLTLNFIGDIVSVETLMGNY-SLESLYLTGNPC---TDYDNYKNFVIG 509
E L R L LDL N + ++ L+ NY SL +L L GNP D + V G
Sbjct: 503 EGLHRLLKLAVLDLGFNKVTTARALGQLVANYHSLRALNLVGNPVQANVGDDALRRAVTG 562
Query: 510 TLPQLTSLDGKDIE 551
LP L L+ + ++
Sbjct: 563 LLPHLAYLNKQPVK 576
>02_02_0162 +
7315562-7315846,7316432-7316662,7317002-7317144,
7317267-7317381,7317940-7318020
Length = 284
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 2/106 (1%)
Frame = +3
Query: 225 CPKLKILLMQSNLIAKIEXXXXXXXXXXXXXXXXXIEVIENLERCESLRKLDLTLNFIGD 404
C L+ L + N I K+E + IE++E L L L N I
Sbjct: 174 CIALEELYLSHNGIQKMEGLSTLQNLRVLDVSSNKLTAIEDVETLSRLEDLWLNDNQIPS 233
Query: 405 IVSVETLMGNY--SLESLYLTGNPCTDYDNYKNFVIGTLPQLTSLD 536
+ +E+ + + L ++YL NPC NY + + P L LD
Sbjct: 234 LDGIESALASSREKLTTIYLERNPCAKAPNYSSTLKTIFPNLEQLD 279
>03_05_0618 + 26177743-26178420,26179477-26179617
Length = 272
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 351 ERC-ESLRKLDLTLNFIGDIVSVETLMGNYSLESLYLTGNPCTDYDNYKNFVIGTLPQLT 527
E C +LR LDL N D+ + L + +ESL L P T Y++ V +P L
Sbjct: 101 ESCGATLRHLDLGNNRFADVAELAPL-APHGVESLDLYQCPVTKAKGYRDKVFALIPSLK 159
Query: 528 SLDGKDIERSE 560
LDG D E ++
Sbjct: 160 FLDGMDAEGND 170
>03_02_0199 -
6347980-6348225,6348300-6348341,6348824-6348978,
6349369-6349475,6349608-6349733,6349809-6349890,
6350057-6350130,6351184-6352631,6353391-6353540,
6353664-6353906,6354009-6354266,6355554-6356015
Length = 1130
Score = 37.5 bits (83), Expect = 0.010
Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 3/139 (2%)
Frame = +3
Query: 153 LLAPLEEIALHQENIEKIEFLQDWCPKLKILLMQSNLIAKIEXXXXXXXXXXXXXXXXX- 329
LL +E + L + K++ L+ C KL+ L + N + I
Sbjct: 196 LLPAVETLDLSRNQFAKVDNLRK-CTKLRNLDLGFNHLRSISSLSEACGRIVQLVLRNNA 254
Query: 330 IEVIENLERCESLRKLDLTLNFIGDIVSVETLMGNYSLESLYLTGNP--CTDYDNYKNFV 503
+ + ++ +SL LDL+ N I + +E L + L++L+L GNP C + + F
Sbjct: 255 LTTLHGIKNLKSLMDLDLSYNIISNFSELEILGSLFLLQNLWLEGNPICCARWYRARVFS 314
Query: 504 IGTLPQLTSLDGKDIERSE 560
+ LD K + E
Sbjct: 315 FLHNSESLKLDDKGMNTQE 333
>05_05_0382 + 24547680-24548760,24548887-24549033,24549389-24550023
Length = 620
Score = 32.7 bits (71), Expect = 0.30
Identities = 38/137 (27%), Positives = 57/137 (41%), Gaps = 4/137 (2%)
Frame = +3
Query: 165 LEEIALHQENIEKIEFLQDWCPKLKILLMQSNLIAKI-EXXXXXXXXXXXXXXXXXIEVI 341
L + L + NI IE L++ L++L + N I KI I +
Sbjct: 372 LRMLNLSRNNISTIEGLKE-LTLLRVLDLSYNRITKIGHGLASCPFLKELYIGGNKISEV 430
Query: 342 ENLERCESLRKLDLTLNFIGDIVSVETLMGNYSLESLYLTGNPC---TDYDNYKNFVIGT 512
E L R + L+ LDL N + ++ L +L+S+ L GNP + K V+
Sbjct: 431 EGLHRLK-LKVLDLHGNSLSSSKCLDQLANCGTLQSITLEGNPAQRNVGDEQLKRHVLRL 489
Query: 513 LPQLTSLDGKDIERSER 563
LP L + K RS R
Sbjct: 490 LPHLVYYN-KQAVRSRR 505
>06_03_1056 + 27239176-27242361
Length = 1061
Score = 32.3 bits (70), Expect = 0.39
Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 333 EVIENLERCESLRKLDLTLN-FIGDIVSVETLMGNYSLESLYLTGN 467
EV LE C+SL LDL N F+G I +L G L L LTGN
Sbjct: 525 EVPTELESCQSLEFLDLARNVFVGSI--PPSLSGLKGLRRLNLTGN 568
>06_03_0912 + 25896152-25896451,25896528-25897296,25897492-25897658,
25898932-25901013,25901155-25901730,25904503-25905648,
25907056-25908693
Length = 2225
Score = 32.3 bits (70), Expect = 0.39
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Frame = +3
Query: 348 LERCESLRKLDLTLNFIGDIVSVE--TLMGNY----SLESLYLTGNPCTDYDNYKNFVIG 509
L+R L + G + SV+ ++GN +L+SL + G CT++ ++ N +
Sbjct: 879 LDRMRQFHSLGFEWSLSGMVSSVKQRAVLGNLRPHRNLQSLSIKGYICTEFPDWINKIND 938
Query: 510 TLPQLTSLDGKDIERSERIMALQNLPFIR 596
TLP L L DI I + LP ++
Sbjct: 939 TLPDLVKLVFSDINGCNYI-PISQLPNLK 966
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 495 NFVIGTLPQLTSLDGKDIERSERIMALQNLPFIRSDIVFEQENYRQQR 638
N + GTLP L L IER + I L NLP ++ ++ R
Sbjct: 977 NKIYGTLPNLVKLILSHIERCDHIPVLGNLPNLQELEIYNMPQLHDAR 1024
>10_07_0053 -
12406958-12407011,12407012-12407168,12407280-12407410,
12407592-12407727,12407953-12408224,12408604-12408893,
12408984-12409285,12409359-12409424,12409506-12409571,
12409855-12409926,12410013-12410084,12410207-12410281,
12410367-12410438,12410531-12410663,12411556-12411655
Length = 665
Score = 31.9 bits (69), Expect = 0.52
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +3
Query: 345 NLERCESLRKLDLTLNFIGDIVSVETLMGNYSLESLYLTGNPCTDYDNYKNFVIGTLPQL 524
N+ ESL +LD++ N +G +++ + N LE L L GN + + I T+P+L
Sbjct: 92 NMNTMESLVELDMSQNNLGGGQNIQYNLPNKKLERLNLAGN---QFAGNVPYSISTMPKL 148
Query: 525 TSLD 536
L+
Sbjct: 149 KYLN 152
>01_07_0302 -
42611150-42611812,42611881-42611961,42612064-42612150,
42612283-42612378,42612479-42612543,42612919-42612975,
42613066-42613147,42613235-42613327,42613714-42613785,
42613881-42613985
Length = 466
Score = 31.9 bits (69), Expect = 0.52
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 2/109 (1%)
Frame = +3
Query: 345 NLERCESLRKLDLTLNFIGDIVSVETLMGNYSLESLYLTGNPCTDYDNYKNFVIGTLPQL 524
+L + + LDL N I +E L + L +L L GNP + D V +P L
Sbjct: 195 DLAKNVKILNLDLGNNLIERRSDLEVLSELHYLRNLNLQGNPIAEKDGLAKKVKKLVPNL 254
Query: 525 TSLDGKDIERSERI--MALQNLPFIRSDIVFEQENYRQQRRKQKSRLEK 665
+ K +E S + +NLP +D + ++K K + K
Sbjct: 255 RIFNSKPMEASSKSKNSREENLPINDADTPDDGPTDIYTKKKGKGKHSK 303
>11_06_0440 - 23567567-23567952,23568192-23569875,23583064-23584215
Length = 1073
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 348 LERCESLRKLDLTLNFIGDIVSVETLMGNYSLESLYLTGN 467
L C SLR LDL+ N +G ++ L + SL SL L+ N
Sbjct: 251 LANCSSLRYLDLSQNKLGGVIP-SALFNSSSLLSLDLSSN 289
>10_08_0333 - 16850267-16851802
Length = 511
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +3
Query: 360 ESLRKLDLTLN-FIGDIVSVETLMGNYSLESLYLTGNPCT 476
+SL+ +DL+ N F G+I +V T N SLES++L GN T
Sbjct: 152 QSLQFMDLSHNRFSGEIPAVNTSY-NCSLESVHLAGNGFT 190
>04_04_1376 +
33058306-33059763,33059851-33059991,33060594-33060644,
33061094-33061171,33061245-33061388,33061871-33062002
Length = 667
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 411 SVETLMGNYSLESLYLTGNPCTDYDNYKNFVIGTLPQLTSLDGKDIERSE 560
SVE L + + +GNP D Y N ++G++ + +L G + RS+
Sbjct: 7 SVEQLADVFGFDHASSSGNPVMDQQGYWNNILGSV-ESHNLQGYQVNRSD 55
>10_05_0113 + 9280756-9283489,9283726-9284048,9284201-9284314
Length = 1056
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 333 EVIENLERCESLRKLDLTLNFIGDIVSVETLMGNYS-LESLYLTGNPCTDYDNYKNFVIG 509
E+ +L RC +L++L+L++NF+ ++ +G S LE L + N N +V
Sbjct: 124 EIPPSLARCLALQRLNLSVNFLSGVIPPS--IGQLSKLEVLNIRHN------NISGYVPS 175
Query: 510 TLPQLTSL 533
T LT+L
Sbjct: 176 TFANLTAL 183
>02_04_0572 + 23972319-23973683
Length = 454
Score = 28.3 bits (60), Expect = 6.4
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Frame = +3
Query: 342 ENLERCESLRKLDLTLN-FIGDI---VSVETLMGNYSLESLYLTGNPCTDYDNYKNFVIG 509
+ L C SL +LDL++N F G I + + + + + L YL+G+ ++ +G
Sbjct: 138 DTLTNCSSLTQLDLSINLFQGQIPLGIGLLSELSDLVLSRNYLSGHIPSE--------LG 189
Query: 510 TLPQLTSLD-GKDIERSERIMALQNLPFIRSDIVFEQENY 626
L +L+SLD +I E AL NL +R ++F + N+
Sbjct: 190 KLSKLSSLDLSVNIISGEIPRALYNLSSLR--MLFLEMNF 227
>01_06_0664 + 30999365-31002089,31002220-31002686
Length = 1063
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 354 RCESLRKLDLTLNFIGDIVSVETLMG-NYSLESLYLTGN 467
RC SLR L+L+ N++G + + +G +L +L L+GN
Sbjct: 121 RCVSLRYLNLSQNYLGGELPADIGVGLGENLTTLVLSGN 159
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,089,444
Number of Sequences: 37544
Number of extensions: 260135
Number of successful extensions: 725
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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