Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30d24
(712 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006661-2|AAK31542.1| 253|Caenorhabditis elegans Spliceosome-a... 48 9e-06
U39849-4|AAA81047.1| 349|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z81035-10|CAB02733.2| 405|Caenorhabditis elegans Hypothetical p... 37 0.016
Z36753-8|CAA85336.1| 326|Caenorhabditis elegans Hypothetical pr... 36 0.022
AF016439-5|AAB65900.1| 630|Caenorhabditis elegans Hypothetical ... 31 0.61
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 30 1.4
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 30 1.4
AF106575-12|AAC78165.1| 374|Caenorhabditis elegans Hypothetical... 30 1.9
U61957-5|AAB03417.3| 559|Caenorhabditis elegans Suppressor of c... 29 2.5
U61957-4|AAM81129.1| 558|Caenorhabditis elegans Suppressor of c... 29 2.5
AF068919-1|AAC39129.1| 559|Caenorhabditis elegans Ras-binding p... 29 2.5
AF054827-1|AAC25697.1| 559|Caenorhabditis elegans leucine-rich ... 29 2.5
AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin ... 29 2.5
Z93381-3|CAB07606.1| 362|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81457-9|CAI94503.1| 263|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF016443-10|AAC24276.4| 325|Caenorhabditis elegans Serpentine r... 29 3.3
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 28 5.7
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 28 5.7
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 28 7.6
>AC006661-2|AAK31542.1| 253|Caenorhabditis elegans
Spliceosome-associated proteinprotein 1 protein.
Length = 253
Score = 47.6 bits (108), Expect = 9e-06
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 2/157 (1%)
Frame = +3
Query: 99 MVRITVELVRKKAEHHDCLLAPLEEIALHQENIEKIEFLQDWCPKLKILLMQSNLIAKIE 278
MVR+T EL ++ + + + + EI L + I IE + + ++ + N I K++
Sbjct: 1 MVRLTTELFAERPQFVNSV--NMREINLRGQKIPVIENMGVTRDQFDVIDLTDNDIRKLD 58
Query: 279 XXXXXXXXXXXXXXXXXIEVI--ENLERCESLRKLDLTLNFIGDIVSVETLMGNYSLESL 452
I I + + +L+ L LT N I ++ +E L LE +
Sbjct: 59 NFPTFSRLNTLYLHNNRINYIAPDIATKLPNLKTLALTNNNICELGDIEPLAECKKLEYV 118
Query: 453 YLTGNPCTDYDNYKNFVIGTLPQLTSLDGKDIERSER 563
GNP T DNY+ ++I LP + +D + +ER
Sbjct: 119 TFIGNPITHKDNYRMYMIYKLPTVRVIDFNRVRLTER 155
>U39849-4|AAA81047.1| 349|Caenorhabditis elegans Hypothetical
protein C06A8.6 protein.
Length = 349
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = +3
Query: 330 IEVIENLERCESLRKLDLTLNFIGDIVSVETLMGNYSLESLYLTGNPCTDYDNYKNFVIG 509
+E +EN+ + ++L N + + ++ L+ L S+YL NP D Y+ VI
Sbjct: 242 LEKVENIHQLKTLTDFWARGNKLDNWSIMDELVELPQLNSVYLDFNPIASVDTYRGKVIH 301
Query: 510 TLPQLTSLDG 539
L Q+T LDG
Sbjct: 302 LLQQITRLDG 311
Score = 33.5 bits (73), Expect = 0.15
Identities = 33/121 (27%), Positives = 51/121 (42%)
Frame = +3
Query: 222 WCPKLKILLMQSNLIAKIEXXXXXXXXXXXXXXXXXIEVIENLERCESLRKLDLTLNFIG 401
W ++ + NLI KIE I +ENL+ +L LDL+ N I
Sbjct: 52 WLTHVEHFSFRWNLIKKIENLDCLTTLTHLEFYDNQITKVENLDSLVNLESLDLSFNRIT 111
Query: 402 DIVSVETLMGNYSLESLYLTGNPCTDYDNYKNFVIGTLPQLTSLDGKDIERSERIMALQN 581
I ++E L L++L+ N T + + TL +L L+ D RI ++N
Sbjct: 112 KIENLEKLT---KLKTLFFVHNKITKIEG-----LDTLTELEYLELGD----NRIAKIEN 159
Query: 582 L 584
L
Sbjct: 160 L 160
>Z81035-10|CAB02733.2| 405|Caenorhabditis elegans Hypothetical
protein C15H11.6 protein.
Length = 405
Score = 36.7 bits (81), Expect = 0.016
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Frame = +3
Query: 366 LRKLDLTLNFIGDIVSVETLMGNYSLESLYLTGNP-CTDY---DNYKNFVIGTLPQLTSL 533
L+ LDL+ N I ++ L G +E+++ GNP C + Y NF+ T P+ ++L
Sbjct: 124 LKFLDLSHNQISSGEELKKL-GTIPVETVFFEGNPVCEKFVQCAEYANFIQKTFPKCSNL 182
Query: 534 DGKDIE-RSERIMALQNLPF 590
DG ++E + + Q +PF
Sbjct: 183 DGMEVEPKPDHNRIEQIIPF 202
>Z36753-8|CAA85336.1| 326|Caenorhabditis elegans Hypothetical
protein T09A5.9 protein.
Length = 326
Score = 36.3 bits (80), Expect = 0.022
Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 2/129 (1%)
Frame = +3
Query: 156 LAPLEEIALHQENIEKIEFLQDWCPKLKILLMQSNLIAKIEXXXXXXXXXXXXXXXXXIE 335
L L ++L I KIE ++ LK L + + I I+
Sbjct: 190 LQKLSVLSLPGNRIVKIENVEQ-LNNLKELYLSDQGLQDIHGVEPLTNLLLLDVANNEIK 248
Query: 336 VIENLERCESLRKLDLTLNFIGDIVSVETLMGNYSLESLYLTGNP--CTDYDNYKNFVIG 509
+ER ESL N + +E L L+++YL NP D + Y+ V+
Sbjct: 249 TFSGVERLESLNDFWANDNKVESFSEIEQLSKLKGLQTVYLERNPFYFNDTNQYRRKVMM 308
Query: 510 TLPQLTSLD 536
TL Q+T +D
Sbjct: 309 TLTQVTQID 317
Score = 35.5 bits (78), Expect = 0.038
Identities = 48/181 (26%), Positives = 73/181 (40%)
Frame = +3
Query: 156 LAPLEEIALHQENIEKIEFLQDWCPKLKILLMQSNLIAKIEXXXXXXXXXXXXXXXXXIE 335
L L + L I +I L D KL+ L + SN I KIE I+
Sbjct: 102 LVNLVSLDLSYNRIRQINGL-DKLTKLETLYLVSNKIEKIENLEALTQLKLLELGDNRIK 160
Query: 336 VIENLERCESLRKLDLTLNFIGDIVSVETLMGNYSLESLYLTGNPCTDYDNYKNFVIGTL 515
IEN+ +L +L + N I + VETL L L L GN +N + + L
Sbjct: 161 KIENIGHLVNLDELFIGKNKIRQLEGVETLQ---KLSVLSLPGNRIVKIENVEQ--LNNL 215
Query: 516 PQLTSLDGKDIERSERIMALQNLPFIRSDIVFEQENYRQQRRKQKSRLEKTIKDKWENEY 695
+L L + ++ + L NL ++ + N + RLE ++ D W N+
Sbjct: 216 KEL-YLSDQGLQDIHGVEPLTNL------LLLDVANNEIKTFSGVERLE-SLNDFWANDN 267
Query: 696 K 698
K
Sbjct: 268 K 268
>AF016439-5|AAB65900.1| 630|Caenorhabditis elegans Hypothetical
protein R02F11.4 protein.
Length = 630
Score = 31.5 bits (68), Expect = 0.61
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Frame = +3
Query: 363 SLRKLDLTLNFIGDIVSVETLMGNYSLESLYLTGNPC------TDYDNYKNFVIGTL-PQ 521
+L+ LD++ N I D+ L LE + GNP +D +Y++++ Q
Sbjct: 211 NLKNLDISSNSIEDLSQFSVLSTFKKLEEFVVAGNPSITSVLDSDLFDYRSYIFACCSEQ 270
Query: 522 LTSLDGKDIE 551
L ++DG+ IE
Sbjct: 271 LHTIDGQKIE 280
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical protein
W04A8.7 protein.
Length = 1792
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Frame = +3
Query: 534 DGKDIERSE------RIMALQNLPFIRSDI---VFEQ--ENYRQQRRKQKSRLEKTIKDK 680
DGKD+ R E I A + R D V+ Q E Y++++RK+K RL+ I+
Sbjct: 1175 DGKDVTRIEIVTRPQLIEAYTRIRMTRDDTFIQVYAQMDEQYKEEKRKKKRRLQDQIRRM 1234
Query: 681 WENEYK 698
+NE K
Sbjct: 1235 KKNEEK 1240
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Frame = +3
Query: 534 DGKDIERSE------RIMALQNLPFIRSDI---VFEQ--ENYRQQRRKQKSRLEKTIKDK 680
DGKD+ R E I A + R D V+ Q E Y++++RK+K RL+ I+
Sbjct: 1175 DGKDVTRIEIVTRPQLIEAYTRIRMTRDDTFIQVYAQMDEQYKEEKRKKKRRLQDQIRRM 1234
Query: 681 WENEYK 698
+NE K
Sbjct: 1235 KKNEEK 1240
>AF106575-12|AAC78165.1| 374|Caenorhabditis elegans Hypothetical
protein K04F1.6 protein.
Length = 374
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -2
Query: 99 FSTNFSDDFCVFSLLKM-L*TENMITFKQ 16
FS N+ DFC F LLK+ L NMI + Q
Sbjct: 2 FSNNYFHDFCAFHLLKLTLKLSNMIFYLQ 30
>U61957-5|AAB03417.3| 559|Caenorhabditis elegans Suppressor of clr
protein 2, isoforma protein.
Length = 559
Score = 29.5 bits (63), Expect = 2.5
Identities = 27/81 (33%), Positives = 40/81 (49%)
Frame = +3
Query: 342 ENLERCESLRKLDLTLNFIGDIVSVETLMGNYSLESLYLTGNPCTDYDNYKNFVIGTLPQ 521
++L ESL LDL N + ++ SV +G SLE+L+L N D IG L +
Sbjct: 136 DSLASLESLETLDLRHNKLTEVPSVIYKIG--SLETLWLRYNRIVAVDEQ----IGNLSK 189
Query: 522 LTSLDGKDIERSERIMALQNL 584
L LD ++ + E A+ L
Sbjct: 190 LKMLDVRENKIRELPSAIGKL 210
>U61957-4|AAM81129.1| 558|Caenorhabditis elegans Suppressor of clr
protein 2, isoformb protein.
Length = 558
Score = 29.5 bits (63), Expect = 2.5
Identities = 27/81 (33%), Positives = 40/81 (49%)
Frame = +3
Query: 342 ENLERCESLRKLDLTLNFIGDIVSVETLMGNYSLESLYLTGNPCTDYDNYKNFVIGTLPQ 521
++L ESL LDL N + ++ SV +G SLE+L+L N D IG L +
Sbjct: 135 DSLASLESLETLDLRHNKLTEVPSVIYKIG--SLETLWLRYNRIVAVDEQ----IGNLSK 188
Query: 522 LTSLDGKDIERSERIMALQNL 584
L LD ++ + E A+ L
Sbjct: 189 LKMLDVRENKIRELPSAIGKL 209
>AF068919-1|AAC39129.1| 559|Caenorhabditis elegans Ras-binding
protein SUR-8 protein.
Length = 559
Score = 29.5 bits (63), Expect = 2.5
Identities = 27/81 (33%), Positives = 40/81 (49%)
Frame = +3
Query: 342 ENLERCESLRKLDLTLNFIGDIVSVETLMGNYSLESLYLTGNPCTDYDNYKNFVIGTLPQ 521
++L ESL LDL N + ++ SV +G SLE+L+L N D IG L +
Sbjct: 136 DSLASLESLETLDLRHNKLTEVPSVIYKIG--SLETLWLRYNRIVAVDEQ----IGNLSK 189
Query: 522 LTSLDGKDIERSERIMALQNL 584
L LD ++ + E A+ L
Sbjct: 190 LKMLDVRENKIRELPSAIGKL 210
>AF054827-1|AAC25697.1| 559|Caenorhabditis elegans leucine-rich
repeat protein SOC-2 protein.
Length = 559
Score = 29.5 bits (63), Expect = 2.5
Identities = 27/81 (33%), Positives = 40/81 (49%)
Frame = +3
Query: 342 ENLERCESLRKLDLTLNFIGDIVSVETLMGNYSLESLYLTGNPCTDYDNYKNFVIGTLPQ 521
++L ESL LDL N + ++ SV +G SLE+L+L N D IG L +
Sbjct: 136 DSLASLESLETLDLRHNKLTEVPSVIYKIG--SLETLWLRYNRIVAVDEQ----IGNLSK 189
Query: 522 LTSLDGKDIERSERIMALQNL 584
L LD ++ + E A+ L
Sbjct: 190 LKMLDVRENKIRELPSAIGKL 210
>AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 3 protein.
Length = 1603
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 540 KDIERSERIMALQNLPF-IRSDIVFEQENYRQQRRKQKSRLEKTIKDKWENEYKDMD 707
+D+E R L+N + +D + E++NYR + +++ + + +EN Y + +
Sbjct: 1458 EDVEEFHRSYLLKNEECEVENDRISEKKNYRNKWNREEKKSDYVSSSDYENNYDEKE 1514
>Z93381-3|CAB07606.1| 362|Caenorhabditis elegans Hypothetical
protein F28G4.3 protein.
Length = 362
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 5 SFVFCLKVIIFSVYNIFS--RENTQKSSLKFVENGENHC*ISTKKS 136
SF+ C ++I + S ++Q+S ++F +NG+N+C + KS
Sbjct: 13 SFLICTVILIAEYSRVRSPTSPHSQRSPVRFFKNGKNNCSCFSDKS 58
>Z81457-9|CAI94503.1| 263|Caenorhabditis elegans Hypothetical
protein C01G12.13 protein.
Length = 263
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 540 KDIERSERIMALQNLPFIRSDIVFEQENYRQQRRKQKSRLEKTIKD 677
+ I+RSE + + S I FE +N QR+KQ+ KT+ D
Sbjct: 180 RQIQRSESRQSPDDTMKNVSSIQFESQNSHIQRKKQQQEAAKTVID 225
>AF016443-10|AAC24276.4| 325|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 9 protein.
Length = 325
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 333 EVIENLERCESLRKLDLTLNFIGDIVSVETLMGNYSLESLYLT-GNPCTDY 482
++ EN++ ++ + ++ F IV+V ++ NY + Y + C DY
Sbjct: 207 QITENIKTAKTFNNIVFSIGFFNTIVNVCLILDNYDIPVTYKNIASVCCDY 257
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 549 ERSERIMALQNLPFIRSDIVFEQENYRQQRRKQKSRLEKTIKDKWEN 689
E+ +IM LP + I++ + NY +Q ++ R+E + +WEN
Sbjct: 611 EQGVKIMQTVGLPPFSAKIMWIR-NYERQLQRYMKRVEDVLGKQWEN 656
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 549 ERSERIMALQNLPFIRSDIVFEQENYRQQRRKQKSRLEKTIKDKWEN 689
E+ +IM LP + I++ + NY +Q ++ R+E + +WEN
Sbjct: 611 EQGVKIMQTVGLPPFSAKIMWIR-NYERQLQRYMKRVEDVLGKQWEN 656
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/46 (26%), Positives = 30/46 (65%)
Frame = +3
Query: 540 KDIERSERIMALQNLPFIRSDIVFEQENYRQQRRKQKSRLEKTIKD 677
K+ ER +++++ + + + +FE++N+R + +++ LEK I+D
Sbjct: 287 KEAERVKQVLSANKDTYAQVESLFEEQNFRAKVTREE--LEKMIED 330
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/46 (26%), Positives = 30/46 (65%)
Frame = +3
Query: 540 KDIERSERIMALQNLPFIRSDIVFEQENYRQQRRKQKSRLEKTIKD 677
K+ ER +++++ + + + +FE++N+R + +++ LEK I+D
Sbjct: 303 KEAERVKQVLSANKDTYAQVESLFEEQNFRAKVTREE--LEKMIED 346
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,141,492
Number of Sequences: 27780
Number of extensions: 269932
Number of successful extensions: 931
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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