Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30d21
         (703 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   3.7  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   4.9  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   6.5  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   6.5  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 410 DIRPDRHVWRRTRCGCWW 463
           ++RP + V   T C C W
Sbjct: 138 EVRPIKRVKDSTNCNCGW 155


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 330 LKTYHEVVDEIYYQVKHLEPW 392
           LK  +  VDE+ + ++ LE W
Sbjct: 293 LKDINRQVDELNFDIQDLERW 313


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = +3

Query: 159 NFMMTEID---EFNQYQKSSKTGKQHNVLPIWGNE 254
           +F +T+ D   EFN  +   K  K+  +L IW ++
Sbjct: 8   SFEITDYDLENEFNINRPRRKLSKKQQMLGIWADD 42


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/30 (23%), Positives = 17/30 (56%)
 Frame = +2

Query: 11  PPSFMLLSIL*NHICFNLTSISSEIYTTKC 100
           PP+ + + +L  ++ F +  ++  I+ T C
Sbjct: 303 PPTSLAIPLLGKYLLFTMILVTLSIWITVC 332


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,174
Number of Sequences: 438
Number of extensions: 3158
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)