Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30d08
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           28   0.062
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.1  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   3.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   5.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.5  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 28.3 bits (60), Expect = 0.062
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = +2

Query: 149 PGDTVRAPHPGRHVPGAHAPHPGQSAPRRTEVRDQPAVRTQHGPAGRHRAAPQLPLRGD 325
           P D   +P P   +P   AP P   AP  + +  +P   T    +G   A+P +P+  D
Sbjct: 73  PSDGTTSPEPDPEIP--VAPEP---APLASPLVQEPGSSTTSATSGAVMASPPMPITTD 126


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +2

Query: 152  GDTVRAPHPGRHVPGAHAPHPGQS 223
            G + R   P  H   A AP PGQ+
Sbjct: 1644 GQSFRLEKPENHGLNAKAPGPGQA 1667



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 640 PPTEPRATVRSKG 678
           PPT+P  T RS+G
Sbjct: 552 PPTKPYGTCRSEG 564



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = -1

Query: 223  TLPWMRSMRPGYMPP 179
            T  W +  +P Y PP
Sbjct: 1163 TSSWQKPTKPSYRPP 1177


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = -1

Query: 586 AGGGGCAPSNPMNCTSTSPSTVRCEMRWYCSRCGNSQKCTPFS 458
           A G     S+P     T P  VRC +R       N +  TPF+
Sbjct: 84  AWGSLXRSSSPQTSAPTGPPIVRCALR---KHKPNRKPRTPFT 123


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 514 EMRWYCSRCGNSQK 473
           EMRWYC      +K
Sbjct: 290 EMRWYCQTATMEEK 303


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/34 (26%), Positives = 15/34 (44%)
 Frame = -1

Query: 601 DMYMLAGGGGCAPSNPMNCTSTSPSTVRCEMRWY 500
           + + L  G G    + + CTS+    +RC    Y
Sbjct: 47  EWFRLVAGEGDNCRDVIQCTSSGLQAIRCPAGLY 80


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 439 GSHSTSASKVSPLACSGIPPAVSS 368
           G H+T ++        G+PP V S
Sbjct: 255 GLHATGSAPSPTAGAGGLPPQVPS 278


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,113
Number of Sequences: 336
Number of extensions: 2991
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)