Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30d06
         (725 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       28   0.089
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    26   0.36 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    26   0.36 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    26   0.36 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   1.9  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.7  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   7.7  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 27.9 bits (59), Expect = 0.089
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = +2

Query: 575 NSSLNDNQEILILSEASMSLSGVFSSPT----ISQASQKSPNTSSRF 703
           N   +DNQ+ L   E S+  SG+FSS T    + + S KS N +  +
Sbjct: 137 NRKPDDNQDHLRRLEMSLEKSGLFSSKTSEHSVDELSGKSDNDAEEY 183


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 163 FFQALGFQKVAISQRNIFVYKFLAVIHIITYI*T 62
           F +ALG  K     R  F+Y F+A +  + +  T
Sbjct: 37  FIRALGKSKKEFKTRTYFIYAFVAPVKCLAFFCT 70


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 163 FFQALGFQKVAISQRNIFVYKFLAVIHIITYI*T 62
           F +ALG  K     R  F+Y F+A +  + +  T
Sbjct: 270 FIRALGKSKKEFKTRTYFIYAFVAPVKCLAFFCT 303


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 163 FFQALGFQKVAISQRNIFVYKFLAVIHIITYI*T 62
           F +ALG  K     R  F+Y F+A +  + +  T
Sbjct: 270 FIRALGKSKKEFKTRTYFIYAFVAPVKCLAFFCT 303


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 575 FLLFHFY*TFRWSKIRFLA 519
           F+LFH Y  F W++I  +A
Sbjct: 121 FVLFHTYEAFVWTRIMGVA 139


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
 Frame = -1

Query: 527 FLATILWLAF-PA---YQRNFHNYYRLSYF 450
           F A   W+   PA   ++  F NYY + YF
Sbjct: 308 FRALTFWIIVAPAGSNFEIGFENYYNILYF 337


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +2

Query: 77  NNMNDSQKFIDKDISLRNS 133
           +++N + +FIDK ++ RNS
Sbjct: 47  SSLNKNFQFIDKKLNNRNS 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,458
Number of Sequences: 336
Number of extensions: 3409
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)