Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30d06
(725 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 30 0.39
SPAC12B10.08c |||mitochondrial tRNA|Schizosaccharomyces pombe|ch... 29 0.68
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 29 0.68
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 29 0.89
SPAC20G8.08c |fft1||fun thirty related protein Fft1|Schizosaccha... 28 1.2
SPBC660.12c |||peptide epimerase |Schizosaccharomyces pombe|chr ... 28 1.2
SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|ch... 28 1.6
SPBC428.18 |cdt1||replication licensing factor Cdt1|Schizosaccha... 27 2.1
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 27 2.1
SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|ch... 27 2.7
SPAC3A11.07 |||NADH dehydrogenase|Schizosaccharomyces pombe|chr ... 27 2.7
SPBP18G5.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 4.8
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 4.8
SPAC1F3.05 |||adaptin |Schizosaccharomyces pombe|chr 1|||Manual 26 4.8
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 26 4.8
SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr 1||... 26 4.8
SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|c... 26 6.3
SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces... 26 6.3
SPBC530.08 |||transcription factor |Schizosaccharomyces pombe|ch... 26 6.3
SPBC582.08 |||alanine aminotransferase |Schizosaccharomyces pomb... 25 8.3
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 25 8.3
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 25 8.3
SPCC338.15 |||dolichyl-di-phosphooligosaccharide-protein glycotr... 25 8.3
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 8.3
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 29.9 bits (64), Expect = 0.39
Identities = 23/84 (27%), Positives = 37/84 (44%)
Frame = +2
Query: 470 NYENFVDKLEKLTIESSLENEFSTNEMFNKNEIKENSSLNDNQEILILSEASMSLSGVFS 649
N N + L + + N+ STN N + E +LN + + S+ +F
Sbjct: 82 NITNKKSVTDNLLLSLTSSNQ-STNTNLNPSSRVEIINLNSSPPNSLSSQPKHQEFHLFH 140
Query: 650 SPTISQASQKSPNTSSRFLITQWN 721
+PTI + +Q S TSS +I N
Sbjct: 141 TPTIPRTTQLSSKTSSPIVIPDDN 164
>SPAC12B10.08c |||mitochondrial tRNA|Schizosaccharomyces pombe|chr
1|||Manual
Length = 456
Score = 29.1 bits (62), Expect = 0.68
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +2
Query: 470 NYENFVDKLEKLTIESSLENEFSTNEMFNKNEIKENSSLNDNQEILILSEASMSLSGVFS 649
N +N VD++ K I S + + + F+KNE+K++S+L + +L + S +
Sbjct: 246 NIDNKVDEILKDNIVSYHQPSGTLSLCFSKNELKKHSNLTKEELLLRCLTLTTSCRQIKR 305
Query: 650 SPTIS 664
S +S
Sbjct: 306 SSVVS 310
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 29.1 bits (62), Expect = 0.68
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = +2
Query: 425 PKFIPVDSKNMIIDNNYENFVDKLEKLTIESSLENEFSTNEMFNKNE-IKENSSLNDNQE 601
P++ V++KN + + + LE + ESS ++ S + N ++ NSS +
Sbjct: 66 PQWKQVNAKNPVARDIFARL--DLENMFEESSKQSPPSKSPTKNPSKKSSNNSSRRSSSS 123
Query: 602 ILILSEASMSLSGVFSSPTISQASQKSPNTSSRF 703
+ LS S S P +SQ +K +SS+F
Sbjct: 124 VGKLSNVSNMQSSPSKDPFVSQDYEKESISSSQF 157
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 28.7 bits (61), Expect = 0.89
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +2
Query: 416 IHSPKFIPVDS-KNMIIDNNYENFVDKLEKLTIESSLENEFSTNEMFNKNEIKENSSLND 592
I S + P+ S KN + NN + + K + +E S + FN EI+ +S
Sbjct: 544 IRSSEVRPLKSQKNTVSINNKIDTSKRRRKGKRRKRVSDEHSASSNFN--EIESQASFEQ 601
Query: 593 NQEILILSEASMSLSGVFSSP 655
NQ + ILSE + + + P
Sbjct: 602 NQTLDILSENIVEIQDKSTDP 622
>SPAC20G8.08c |fft1||fun thirty related protein
Fft1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 28.3 bits (60), Expect = 1.2
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Frame = +2
Query: 335 QAERELLTVTYSSENTWEIDFCPWENIIHSPKFIPVDSKNMIIDNNYENFVDKLEKLTIE 514
Q ++ L + S E T E D + SP D+ IDN+ DK+E+++IE
Sbjct: 207 QKKKPLRVIELSDEETNEDDL-----LGQSPTACTTDAN---IDNSIPENSDKIEEVSIE 258
Query: 515 SSLENEFSTNEMFNKNEIKENSSLNDN--QEILILSEASMSLSGVFSS 652
SS +E +EM ++ +++ + LN++ QEI+ +S + F S
Sbjct: 259 SSGPSEVE-DEM-SEYDVRVLNFLNESTLQEIVEVSGCESKVVEYFIS 304
>SPBC660.12c |||peptide epimerase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 392
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +2
Query: 104 IDKDISLRNSYLLESQSLEEDTDLKTKYKTFLWFLNYGKIFVTRLTKDLIISLASYVYSG 283
++ ++ LRN +E+Q + KY TFL F+ + F TRL+ + + + + Y
Sbjct: 329 VNVEVPLRNIPSIETQKV-----FWPKYNTFLRFMEFKGKFYTRLSGAVYLEESDFYYIA 383
Query: 284 QLL 292
+++
Sbjct: 384 KVI 386
>SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 27.9 bits (59), Expect = 1.6
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 419 HSPKFIPVDSKNMIIDNN-YENFVDKLEKLTIESSLENEFSTNEMFNKNEIKEN 577
HS + +S + I DN+ Y N ++ L + +L+N +TN+ + + ++EN
Sbjct: 639 HSDTSVKSNSPSSIFDNSGYLNSLNN-SILQMHQNLQNSSNTNDQYKFDSVQEN 691
>SPBC428.18 |cdt1||replication licensing factor
Cdt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 444
Score = 27.5 bits (58), Expect = 2.1
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Frame = +2
Query: 383 WEIDFCPWENI-IHSPKFIPVDSKNMIIDNNYENFVDKLEKLTIES------SLENEFST 541
W ++ C I + +P SKN + +++ ++ LEK T +LE +F+T
Sbjct: 192 WLLEHCSETEIPAQQLQALPSLSKNTVNESSLVRKLN-LEKSTSRELRIPTQTLEPKFTT 250
Query: 542 NEMFNKNEIKENSSLNDNQEILILSEASMSLSGVFSSPTISQASQKSPNTSSRFLITQ 715
N NE+ S L+ + + + ++L SS ++ +S+K TSS+ + Q
Sbjct: 251 NTAKYANELVSCSMLDSSSTLSKSVNSKINLKSHQSSSSVQNSSRKL--TSSQLTLRQ 306
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/65 (20%), Positives = 32/65 (49%)
Frame = +2
Query: 440 VDSKNMIIDNNYENFVDKLEKLTIESSLENEFSTNEMFNKNEIKENSSLNDNQEILILSE 619
++S + +NN + ++++ L +ES E E +++ +K S N + +L +
Sbjct: 41 LESNIAVSENNIKYLRERIDALKVESGSERESQSDKDSSKKYSDSAKSTNSDDHLLSYNR 100
Query: 620 ASMSL 634
++ L
Sbjct: 101 SAFDL 105
>SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|chr
3|||Manual
Length = 923
Score = 27.1 bits (57), Expect = 2.7
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +2
Query: 470 NYENFVDKLEKLTIESSLENEFSTNEMF---NKNEIKENSSLNDNQEILILSEASMSLSG 640
NY +LEK+ ++ S ++ + NE F N E ++N S + N++ + +
Sbjct: 602 NYTLRFPRLEKVRLDRSWKDALTINEFFTLKNAVEKQDNVSFHVNKKRKVSQKREKQKKF 661
Query: 641 VFSSPTISQASQKSPNT 691
++ PT + + SP++
Sbjct: 662 LYDEPTFKK--EASPHS 676
>SPAC3A11.07 |||NADH dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 551
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 230 TRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELL 355
T L +++S +Y LLP T +HT+ I+Q R +L
Sbjct: 112 TSLFNVIVVSPRNYFLFTSLLPSTATGSVHTRSIVQPIRYML 153
>SPBP18G5.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 430
Score = 26.2 bits (55), Expect = 4.8
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +2
Query: 470 NYENFVDKL--EKLTIESSLENEFSTNEMFNKNEIKENSSLNDNQEILI 610
NYE + KL + TIE SLE E T N KE+S D +I
Sbjct: 171 NYEAYETKLLEDASTIEKSLEKEVKTIYDSNIASPKESSDAIDADHAMI 219
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 26.2 bits (55), Expect = 4.8
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = +2
Query: 428 KFIPVDSKNMIIDNNYENFVDKLEKLTIESSLENE---FSTNEMFNKNEIKENSSLNDNQ 598
KF+P + N + + + VDKL + I + + F + E+ + E+SS D+
Sbjct: 1860 KFLPFEDVNQVEIDKFRQVVDKLPTVEIPNESRSSAFIFPSYELAEGLTMMESSSFMDSI 1919
Query: 599 EILILSEASMSLSGVFSSPTISQASQ 676
I S S S F S A Q
Sbjct: 1920 ISFIDSTCFPSSSRWFQYAPSSTACQ 1945
>SPAC1F3.05 |||adaptin |Schizosaccharomyces pombe|chr 1|||Manual
Length = 510
Score = 26.2 bits (55), Expect = 4.8
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 5/156 (3%)
Frame = +2
Query: 245 DLIISLASYVYS-GQLLPKHITDLMHTQKILQAERELLTVTYSSENTWEIDFCPWENIIH 421
D + SL Y ++L + D + QK+L L+ V I+ C ++IH
Sbjct: 253 DAVESLKVYQTKIARILREENEDEYYVQKLLSLNDLLINV---------IEECSNSDLIH 303
Query: 422 SPKFIPVDSKNMIIDNNYENFVDKLEKLTIESSLENEFSTNEMFNKNEIKENSSLNDNQE 601
S + V S+ +++++ + ++ ESSL + E +++ NQ
Sbjct: 304 SGTNV-VSSQPNVVESHVPPSSNDTKQ---ESSLIDLMKLTEEPAVPSPSLPTNVPANQS 359
Query: 602 ILILSEASMSLS----GVFSSPTISQASQKSPNTSS 697
+ +LS S S+S G +SP+ SQA+ PNT+S
Sbjct: 360 LSMLSSLSNSMSSTSNGALNSPSYSQAA--IPNTNS 393
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 26.2 bits (55), Expect = 4.8
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 407 ENIIHSPK-FIPVDSKNMIIDNNYENFVDK 493
E++I+ PK I + ++ + D YENFV K
Sbjct: 27 EDLIYRPKKIIKTNQEDAVHDLKYENFVSK 56
>SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 992
Score = 26.2 bits (55), Expect = 4.8
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +2
Query: 419 HSPKFIP---VDSKNMIIDNNYENFVDKLEKLTIESSLEN-EFSTNEMFNKNEIKE 574
HSP F+ + K + NYE F+D L L E+++E E ++ ++ + I +
Sbjct: 868 HSPDFLAWCKISLKGLNEGVNYEEFLDMLLSLPAENNVETFEIISDSIYANSTIMD 923
>SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 367
Score = 25.8 bits (54), Expect = 6.3
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 62 SLNVSNNMNDSQKFIDKDISLRNSYLLESQSLEEDTD 172
S+ V+ N NDS + ++ RN+ +SQSL+ T+
Sbjct: 42 SIGVTENGNDSPEAFKNELDNRNN--ADSQSLQSSTE 76
>SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 224
Score = 25.8 bits (54), Expect = 6.3
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 524 ENEFSTNEMFNKNEIKENSSLNDNQEILILSEAS 625
ENE + NKNE +SL N+EI+ E S
Sbjct: 133 ENEETKETTTNKNESLPGTSLKRNREIIEKEERS 166
>SPBC530.08 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 815
Score = 25.8 bits (54), Expect = 6.3
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -1
Query: 86 SYYYLHLNLRCKINTKLHKSIEE 18
++YY+ L L C + LH++I E
Sbjct: 335 AWYYMKLGLNCCLRLGLHRNITE 357
>SPBC582.08 |||alanine aminotransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 505
Score = 25.4 bits (53), Expect = 8.3
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +2
Query: 203 FLNYGKIFVTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLTVTYSSENT 382
+L G RL LII+ + G ++P L Q L + +++ + S EN
Sbjct: 167 YLTSGASHAARLIMTLIIARPT---DGVMVPAPQYPLYGAQIDLMSG-SMVSYSLSEENN 222
Query: 383 WEIDF 397
W+IDF
Sbjct: 223 WDIDF 227
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 25.4 bits (53), Expect = 8.3
Identities = 21/93 (22%), Positives = 38/93 (40%)
Frame = +2
Query: 416 IHSPKFIPVDSKNMIIDNNYENFVDKLEKLTIESSLENEFSTNEMFNKNEIKENSSLNDN 595
+ S + +D + ++ N N + E +S E + + + +SS+
Sbjct: 544 VQSDELEDIDPRANVVLNVGPNMLSVGEAPVESTSKEEDKDVPDPIANAMAELSSSMRRR 603
Query: 596 QEILILSEASMSLSGVFSSPTISQASQKSPNTS 694
Q + EA +SLS SS ++ S NTS
Sbjct: 604 QSTSVDDEAPVSLSKTSSSTRLNGLGYHSRNTS 636
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 25.4 bits (53), Expect = 8.3
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +2
Query: 503 LTIESSLENEFSTNEMFNKNEIKENSSLNDNQEILILSEASMSLSGVFSSPTISQASQKS 682
L +SS NE T+ K + ENS+ +N E + + + S + S+P Q S+
Sbjct: 347 LRSDSSKPNEAPTSSENIKADQPENSTKQENPEEDMQIKDAEEHSNLESTPAAQQTSEVE 406
Query: 683 PN 688
N
Sbjct: 407 AN 408
>SPCC338.15 |||dolichyl-di-phosphooligosaccharide-protein
glycotransferase subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 437
Score = 25.4 bits (53), Expect = 8.3
Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 4/123 (3%)
Frame = +2
Query: 95 QKFIDKDISLRNSYLL-ESQSLEEDTDLKTKYKTFL--WFLNYGKIFVTRLTKDLIISLA 265
Q D+D ++ SY+ ES L E + L + G +F + + + S
Sbjct: 40 QSLTDRDFDVKTSYIKDESAKLFEYGERLYDNLILLSSQSKSLGPVFSPKSLLEFVQSGG 99
Query: 266 S-YVYSGQLLPKHITDLMHTQKILQAERELLTVTYSSENTWEIDFCPWENIIHSPKFIPV 442
+ +V +G LP+ I +L + AER+ + V + + D + I +P I
Sbjct: 100 NLFVVAGSQLPEGIRELGRQLDMFLAERQSVVVDHFNHAEGSDDIILLDGISENPYIISD 159
Query: 443 DSK 451
+++
Sbjct: 160 ETR 162
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.4 bits (53), Expect = 8.3
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +2
Query: 521 LENEFSTNEMFNKNEIKENSSLNDNQEILILSEASMSLSGVFSSPTISQASQKSPNTSS 697
L+ + + N + + ++EN S +DN+ +S SG FSS +SQ + K+ + SS
Sbjct: 3049 LKKQQAANVLRGNSRLRENDSSSDNK------SKDLSPSGSFSS--VSQFNSKNGSPSS 3099
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,821,015
Number of Sequences: 5004
Number of extensions: 56477
Number of successful extensions: 242
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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