Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30d06
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024847-6|AAF60855.1| 909|Caenorhabditis elegans Patched relat... 33 0.16
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 32 0.36
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 32 0.36
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 32 0.36
Z73423-1|CAA97776.2| 492|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 30 1.9
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 30 1.9
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 30 1.9
U39667-3|AAQ91909.1| 417|Caenorhabditis elegans Xo lethal prote... 29 2.6
U39667-2|AAQ91910.1| 426|Caenorhabditis elegans Xo lethal prote... 29 2.6
L35129-3|AAA67048.1| 355|Caenorhabditis elegans xol-1 protein. 29 2.6
L35129-2|AAA67049.1| 417|Caenorhabditis elegans xol-1 protein. 29 2.6
L35129-1|AAA67047.1| 426|Caenorhabditis elegans xol-1 protein. 29 2.6
U97016-10|AAP68963.1| 181|Caenorhabditis elegans Hypothetical p... 29 3.4
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 5.9
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 5.9
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 5.9
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 28 7.8
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 28 7.8
>AC024847-6|AAF60855.1| 909|Caenorhabditis elegans Patched related
family protein 21 protein.
Length = 909
Score = 33.5 bits (73), Expect = 0.16
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Frame = +2
Query: 137 LLESQSLEEDTDLKTKYKTFLWFLNYGKIFVTRLTKDLIISLASYVYSGQLL--PKHITD 310
LL S+ + E + L+ + L F Y KI +R T L+I + S VY G + I
Sbjct: 452 LLLSERVNEPSKLEGTFNKVLGF--YAKIICSRWTFALLI-IGSLVYWGFGIYGTLGIRA 508
Query: 311 LMHTQKILQAERELLTVTYSSENTWEIDFCPWENIIHSPKFIPVDSKNMIIDNNYENFVD 490
+++T KIL E + E T +F P I++SP I + DN +F +
Sbjct: 509 VLNTAKILPLETPIRKPNRIIEETVWKEFYPVTVIVNSPVDISNANALRAFDNLVHDF-E 567
Query: 491 KLEK 502
+EK
Sbjct: 568 SMEK 571
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 32.3 bits (70), Expect = 0.36
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 443 DSKNMIIDNNYENFVDKLEKLTIE-SSLENEFSTNEMFNKNEIKENSSLNDNQEILILSE 619
D K + +N ++ + KL K+ E S++ S +E N N +K+N+SL + ++ L+E
Sbjct: 1275 DHKMREMQSNLDDLMAKLSKMNNELESIQKAKSADETLNSNLLKKNASL--DMQLSELTE 1332
Query: 620 AS 625
AS
Sbjct: 1333 AS 1334
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 32.3 bits (70), Expect = 0.36
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 443 DSKNMIIDNNYENFVDKLEKLTIE-SSLENEFSTNEMFNKNEIKENSSLNDNQEILILSE 619
D K + +N ++ + KL K+ E S++ S +E N N +K+N+SL + ++ L+E
Sbjct: 1275 DHKMREMQSNLDDLMAKLSKMNNELESIQKAKSADETLNSNLLKKNASL--DMQLSELTE 1332
Query: 620 AS 625
AS
Sbjct: 1333 AS 1334
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 32.3 bits (70), Expect = 0.36
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 443 DSKNMIIDNNYENFVDKLEKLTIE-SSLENEFSTNEMFNKNEIKENSSLNDNQEILILSE 619
D K + +N ++ + KL K+ E S++ S +E N N +K+N+SL + ++ L+E
Sbjct: 1275 DHKMREMQSNLDDLMAKLSKMNNELESIQKAKSADETLNSNLLKKNASL--DMQLSELTE 1332
Query: 620 AS 625
AS
Sbjct: 1333 AS 1334
>Z73423-1|CAA97776.2| 492|Caenorhabditis elegans Hypothetical
protein C03A3.2 protein.
Length = 492
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +2
Query: 8 VTLFPQLICAIWY*FYILSLNVSNNMNDSQKFIDKDISLRNSYLLESQSLEEDTD 172
+ LFP I + + I++L + NN N + + + N LLE+ SL ED D
Sbjct: 325 LALFP--IITLTSSYPIIALTLINNFNVVKDILCPKVGQENESLLEADSLVEDND 377
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +2
Query: 482 FVDKLEKLTIESSLENEFSTNEMFNKNEIKENSSLNDNQEILILSEASMSLSGVFSSPTI 661
F L +L SSL N S N+ + NE +N ++ ++LI S + S + TI
Sbjct: 2188 FSQFLPQLGANSSLNNSNSKND--SSNEWGQNEFIS---QLLINSSLPNATSSPQGASTI 2242
Query: 662 SQASQKSPNTSS 697
S A + P+TSS
Sbjct: 2243 SSAPVQQPSTSS 2254
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +2
Query: 482 FVDKLEKLTIESSLENEFSTNEMFNKNEIKENSSLNDNQEILILSEASMSLSGVFSSPTI 661
F L +L SSL N S N+ + NE +N ++ ++LI S + S + TI
Sbjct: 2210 FSQFLPQLGANSSLNNSNSKND--SSNEWGQNEFIS---QLLINSSLPNATSSPQGASTI 2264
Query: 662 SQASQKSPNTSS 697
S A + P+TSS
Sbjct: 2265 SSAPVQQPSTSS 2276
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
R11A8.7d protein.
Length = 1427
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +2
Query: 482 FVDKLEKLTIESSLENEFSTNEMFNKNEIKENSSLNDNQEILILSEASMSLSGVFSSPTI 661
F L +L SSL N S N+ + NE +N ++ ++LI S + S + TI
Sbjct: 1031 FSQFLPQLGANSSLNNSNSKND--SSNEWGQNEFIS---QLLINSSLPNATSSPQGASTI 1085
Query: 662 SQASQKSPNTSS 697
S A + P+TSS
Sbjct: 1086 SSAPVQQPSTSS 1097
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
R11A8.7c protein.
Length = 1405
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +2
Query: 482 FVDKLEKLTIESSLENEFSTNEMFNKNEIKENSSLNDNQEILILSEASMSLSGVFSSPTI 661
F L +L SSL N S N+ + NE +N ++ ++LI S + S + TI
Sbjct: 1009 FSQFLPQLGANSSLNNSNSKND--SSNEWGQNEFIS---QLLINSSLPNATSSPQGASTI 1063
Query: 662 SQASQKSPNTSS 697
S A + P+TSS
Sbjct: 1064 SSAPVQQPSTSS 1075
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +2
Query: 482 FVDKLEKLTIESSLENEFSTNEMFNKNEIKENSSLNDNQEILILSEASMSLSGVFSSPTI 661
F L +L SSL N S N+ + NE +N ++ ++LI S + S + TI
Sbjct: 2188 FSQFLPQLGANSSLNNSNSKND--SSNEWGQNEFIS---QLLINSSLPNATSSPQGASTI 2242
Query: 662 SQASQKSPNTSS 697
S A + P+TSS
Sbjct: 2243 SSAPVQQPSTSS 2254
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +2
Query: 482 FVDKLEKLTIESSLENEFSTNEMFNKNEIKENSSLNDNQEILILSEASMSLSGVFSSPTI 661
F L +L SSL N S N+ + NE +N ++ ++LI S + S + TI
Sbjct: 2210 FSQFLPQLGANSSLNNSNSKND--SSNEWGQNEFIS---QLLINSSLPNATSSPQGASTI 2264
Query: 662 SQASQKSPNTSS 697
S A + P+TSS
Sbjct: 2265 SSAPVQQPSTSS 2276
>U39667-3|AAQ91909.1| 417|Caenorhabditis elegans Xo lethal protein
1, isoform b protein.
Length = 417
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Frame = +2
Query: 386 EIDFCPWE---NIIHS--PKF-IPVDSKNMIIDNNYENFVDKLEKLTIESSLENEFSTNE 547
E D C E +I++S KF + + KN +ID +++ + + SLEN T E
Sbjct: 142 ETDICDQEVLKSIMNSVIAKFELQIPCKNAVIDATLSGSREEVHIIAEDGSLENSNGTTE 201
Query: 548 MFNK 559
FNK
Sbjct: 202 HFNK 205
>U39667-2|AAQ91910.1| 426|Caenorhabditis elegans Xo lethal protein
1, isoform c protein.
Length = 426
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Frame = +2
Query: 386 EIDFCPWE---NIIHS--PKF-IPVDSKNMIIDNNYENFVDKLEKLTIESSLENEFSTNE 547
E D C E +I++S KF + + KN +ID +++ + + SLEN T E
Sbjct: 142 ETDICDQEVLKSIMNSVIAKFELQIPCKNAVIDATLSGSREEVHIIAEDGSLENSNGTTE 201
Query: 548 MFNK 559
FNK
Sbjct: 202 HFNK 205
>L35129-3|AAA67048.1| 355|Caenorhabditis elegans xol-1 protein.
Length = 355
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Frame = +2
Query: 386 EIDFCPWE---NIIHS--PKF-IPVDSKNMIIDNNYENFVDKLEKLTIESSLENEFSTNE 547
E D C E +I++S KF + + KN +ID +++ + + SLEN T E
Sbjct: 142 ETDICDQEVLKSIMNSVIAKFELQIPCKNAVIDATLSGSREEVHIIAEDGSLENSNGTTE 201
Query: 548 MFNK 559
FNK
Sbjct: 202 HFNK 205
>L35129-2|AAA67049.1| 417|Caenorhabditis elegans xol-1 protein.
Length = 417
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Frame = +2
Query: 386 EIDFCPWE---NIIHS--PKF-IPVDSKNMIIDNNYENFVDKLEKLTIESSLENEFSTNE 547
E D C E +I++S KF + + KN +ID +++ + + SLEN T E
Sbjct: 142 ETDICDQEVLKSIMNSVIAKFELQIPCKNAVIDATLSGSREEVHIIAEDGSLENSNGTTE 201
Query: 548 MFNK 559
FNK
Sbjct: 202 HFNK 205
>L35129-1|AAA67047.1| 426|Caenorhabditis elegans xol-1 protein.
Length = 426
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Frame = +2
Query: 386 EIDFCPWE---NIIHS--PKF-IPVDSKNMIIDNNYENFVDKLEKLTIESSLENEFSTNE 547
E D C E +I++S KF + + KN +ID +++ + + SLEN T E
Sbjct: 142 ETDICDQEVLKSIMNSVIAKFELQIPCKNAVIDATLSGSREEVHIIAEDGSLENSNGTTE 201
Query: 548 MFNK 559
FNK
Sbjct: 202 HFNK 205
>U97016-10|AAP68963.1| 181|Caenorhabditis elegans Hypothetical
protein B0261.8 protein.
Length = 181
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 488 DKLEKLTIESSLENEFSTN-EMFNKNEIKENSSLNDNQEILILSEASMSLSGVFSSPTIS 664
+K ++ E +LEN F E N NE +EN ND L+EA + VFS+ ++
Sbjct: 112 EKEAQVDQEDTLENLFEKETESNNTNEQQENVETNDTTSNFDLNEAEERVD-VFSNGLLT 170
Query: 665 QASQKSP 685
P
Sbjct: 171 SIQSTQP 177
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 464 DNNYENFVDKLEKLTIESSLENEFSTNEMFNKNEI-KENSSLND 592
D N E+ +LEKL ESSL N ++N + E+ KE L D
Sbjct: 2076 DANEESLRSQLEKLKNESSLSNVDNSNAVKIVEELKKEKKDLTD 2119
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 464 DNNYENFVDKLEKLTIESSLENEFSTNEMFNKNEI-KENSSLND 592
D N E+ +LEKL ESSL N ++N + E+ KE L D
Sbjct: 2076 DANEESLRSQLEKLKNESSLSNVDNSNAVKIVEELKKEKKDLTD 2119
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 464 DNNYENFVDKLEKLTIESSLENEFSTNEMFNKNEI-KENSSLND 592
D N E+ +LEKL ESSL N ++N + E+ KE L D
Sbjct: 2076 DANEESLRSQLEKLKNESSLSNVDNSNAVKIVEELKKEKKDLTD 2119
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +2
Query: 524 ENEFSTNEMFNKNEIKENSS-LNDNQEILILSEASMSLSG----VFSSPTISQASQKSPN 688
ENE ST N N + +S+ L+++Q I L+ +S S + + S T+ Q Q+ N
Sbjct: 571 ENELSTTGRHNNNAVSNSSALLHNSQSIASLASSSCSTATTSEFLNSQHTLQQQQQQQTN 630
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical
protein C04D8.1 protein.
Length = 1317
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +2
Query: 524 ENEFSTNEMFNKNEIKENSS-LNDNQEILILSEASMSLSG----VFSSPTISQASQKSPN 688
ENE ST N N + +S+ L+++Q I L+ +S S + + S T+ Q Q+ N
Sbjct: 449 ENELSTTGRHNNNAVSNSSALLHNSQSIASLASSSCSTATTSEFLNSQHTLQQQQQQQTN 508
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,151,185
Number of Sequences: 27780
Number of extensions: 298829
Number of successful extensions: 1078
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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