Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30d04
(763 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92780-4|CAI46549.1| 642|Caenorhabditis elegans Hypothetical pr... 32 0.39
AL021466-4|CAI46582.1| 642|Caenorhabditis elegans Hypothetical ... 32 0.39
AL032642-1|CAA21651.2| 461|Caenorhabditis elegans Hypothetical ... 31 0.68
Z81562-6|CAB04554.1| 211|Caenorhabditis elegans Hypothetical pr... 30 1.6
AL032642-2|CAA21653.1| 332|Caenorhabditis elegans Hypothetical ... 30 1.6
AC006680-2|AAK72302.1| 309|Caenorhabditis elegans Serpentine re... 30 1.6
U41022-1|AAA82338.3| 303|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z74033-7|CAA98472.2| 325|Caenorhabditis elegans Hypothetical pr... 29 2.7
U41542-13|ABO16442.1| 390|Caenorhabditis elegans Hsn abnormal m... 29 3.6
U41542-12|ABO16443.1| 392|Caenorhabditis elegans Hsn abnormal m... 29 3.6
AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical ... 29 4.8
Z49907-7|CAA90088.1| 497|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 28 6.3
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 28 6.3
Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z81132-1|CAB03430.1| 361|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z50795-2|CAA90663.1| 618|Caenorhabditis elegans Hypothetical pr... 28 8.3
AC024801-7|AAK95892.2| 606|Caenorhabditis elegans Hypothetical ... 28 8.3
AC006642-8|AAF39827.2| 365|Caenorhabditis elegans Laterally sym... 28 8.3
AC006615-4|AAK68233.2| 602|Caenorhabditis elegans Hypothetical ... 28 8.3
>Z92780-4|CAI46549.1| 642|Caenorhabditis elegans Hypothetical
protein C45G3.5 protein.
Length = 642
Score = 32.3 bits (70), Expect = 0.39
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Frame = +3
Query: 279 KELAEVYETQSLLFSGNNETKTLEAPSIDTTDNQLTLESNVSGQYFNVESILVRESENLM 458
+E E+ T+ LF N+T+ + D D +++ +N+S F + S L R + L+
Sbjct: 52 EEQEEMVFTELKLFLVGNQTENIRIDEYDKHDLPISILANISFDPF-IRSELERFHDILV 110
Query: 459 EQATE---CYVVQDDNL-FNFESTLLD---ENTVNQFL----LPAKGSTEANR 584
AT CY + D++ F+ S+ + E VN F+ GSTEAN+
Sbjct: 111 TVATIKICCYAITHDSVTFSSISSAVASTIEKKVNGFITKICTKLSGSTEANQ 163
>AL021466-4|CAI46582.1| 642|Caenorhabditis elegans Hypothetical
protein C45G3.5 protein.
Length = 642
Score = 32.3 bits (70), Expect = 0.39
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Frame = +3
Query: 279 KELAEVYETQSLLFSGNNETKTLEAPSIDTTDNQLTLESNVSGQYFNVESILVRESENLM 458
+E E+ T+ LF N+T+ + D D +++ +N+S F + S L R + L+
Sbjct: 52 EEQEEMVFTELKLFLVGNQTENIRIDEYDKHDLPISILANISFDPF-IRSELERFHDILV 110
Query: 459 EQATE---CYVVQDDNL-FNFESTLLD---ENTVNQFL----LPAKGSTEANR 584
AT CY + D++ F+ S+ + E VN F+ GSTEAN+
Sbjct: 111 TVATIKICCYAITHDSVTFSSISSAVASTIEKKVNGFITKICTKLSGSTEANQ 163
>AL032642-1|CAA21651.2| 461|Caenorhabditis elegans Hypothetical
protein Y48A6C.1 protein.
Length = 461
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 582 RDEQNGPDVLALHSCVICHEIFTTESDLLDHTILLHASSQT 704
RD+ D H C C E F + + +HT+L H ++QT
Sbjct: 24 RDDHLTADHHLEHMCSECEESFGSAEEAKEHTLLAHENAQT 64
>Z81562-6|CAB04554.1| 211|Caenorhabditis elegans Hypothetical
protein K03D7.9 protein.
Length = 211
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 17 IYTMLTLYNFITIFIYYRLNQKLTTEYEYSVLKNLMSYLLIFI 145
+Y ++ +Y+ +F L Q + YEY +KN++S + +F+
Sbjct: 133 LYRVVPIYSLQVVFTLIALMQCILGYYEYKEIKNVLSAVSMFL 175
>AL032642-2|CAA21653.1| 332|Caenorhabditis elegans Hypothetical
protein Y48A6C.3 protein.
Length = 332
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 618 HSCVICHEIFTTESDLLDHTILLHASSQT 704
H C C E F + + +HT+L H ++QT
Sbjct: 32 HMCSECEESFGSAEEAKEHTLLAHENAQT 60
>AC006680-2|AAK72302.1| 309|Caenorhabditis elegans Serpentine
receptor, class x protein9 protein.
Length = 309
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Frame = +2
Query: 2 IFLFY--IYTMLTLYNFITIFIYYR-LNQKLTTEYEYSVLKNLMSYLLIFIFIN---DNL 163
+FL Y I T ++++ +I +FI R N+K++T+ + K + YLL F+F +
Sbjct: 176 MFLVYDSICTSISIFCYIGVFISIRNSNKKVSTQIQKQRRKQEIRYLLQFMFTSVFYITT 235
Query: 164 WIVQEM 181
W++ E+
Sbjct: 236 WVIFEI 241
>U41022-1|AAA82338.3| 303|Caenorhabditis elegans Hypothetical
protein K08B5.2 protein.
Length = 303
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 481 LSKMIIYLISNQLYLTKTLLTNFFYQLKVP 570
+SK++ YL+ N++YLTK + F +L P
Sbjct: 186 VSKVLQYLLENEIYLTKCVKAKFNVRLSSP 215
>Z74033-7|CAA98472.2| 325|Caenorhabditis elegans Hypothetical
protein F38B7.4 protein.
Length = 325
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +2
Query: 11 FYIYTMLTLYNFITIFIYYRLNQKLTTEYEYSVLKNLMSYLLIFIFINDNLWIV 172
F I +++ + F IF +Y+ K E + KN+ YL I + D+L+++
Sbjct: 199 FAIVSVINVATFAKIFKFYKNQNKTDKESRKRIKKNI--YLFIQTVLQDSLYLI 250
>U41542-13|ABO16442.1| 390|Caenorhabditis elegans Hsn abnormal
migration protein2, isoform a protein.
Length = 390
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 582 RDEQNGPDVLALHSCVICHEIFTTESDLLDHTILLHASSQT 704
R E PD+ C IC ++F S L H + H S T
Sbjct: 4 RAELKRPDLKGSFPCSICQKVFCHSSSLSRHRMQAHFKSYT 44
>U41542-12|ABO16443.1| 392|Caenorhabditis elegans Hsn abnormal
migration protein2, isoform b protein.
Length = 392
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 582 RDEQNGPDVLALHSCVICHEIFTTESDLLDHTILLHASSQT 704
R E PD+ C IC ++F S L H + H S T
Sbjct: 4 RAELKRPDLKGSFPCSICQKVFCHSSSLSRHRMQAHFKSYT 44
>AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical
protein Y80D3A.2 protein.
Length = 1467
Score = 28.7 bits (61), Expect = 4.8
Identities = 25/107 (23%), Positives = 45/107 (42%)
Frame = +3
Query: 270 YPYKELAEVYETQSLLFSGNNETKTLEAPSIDTTDNQLTLESNVSGQYFNVESILVRESE 449
YP++ L E T N T+ E P + T+ + E+ + + + + +L +
Sbjct: 408 YPHQHLVETI-TLHCERRPNQLTQLNEKP-LFPTEKVIWDENIIPYENYTGDGVLALDKL 465
Query: 450 NLMEQATECYVVQDDNLFNFESTLLDENTVNQFLLPAKGSTEANRDE 590
NL Y++++ NLF EST + L K +R+E
Sbjct: 466 NLQFLTLHDYLLRNFNLFQLESTYEIRQDLEDVLFRMKPFQHESRNE 512
>Z49907-7|CAA90088.1| 497|Caenorhabditis elegans Hypothetical
protein B0491.6a protein.
Length = 497
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 636 HEIFTTESDLLDHTILLHASSQTDSGILEH 725
H+I T + LLDH I AS+ D+ L+H
Sbjct: 11 HDIPCTSASLLDHLIQKEASAAEDTDPLDH 40
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +3
Query: 273 PYKELAEVYETQSLLFSGNNETKTLEAPSIDTT 371
P + L E+ E Q+ SG KTLE PS DTT
Sbjct: 699 PSQVLEEIVEVQN---SGMTTKKTLEIPSYDTT 728
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +3
Query: 273 PYKELAEVYETQSLLFSGNNETKTLEAPSIDTT 371
P + L E+ E Q+ SG KTLE PS DTT
Sbjct: 699 PSQVLEEIVEVQN---SGMTTKKTLEIPSYDTT 728
>Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 300 ETQSLLFSGNNETKTLEAPSIDTTDNQLTLESNVSGQYF-NVESILVRESENLMEQATEC 476
ET+++ SG E T AP+ + T L+S+ NV+ I R + +Q C
Sbjct: 627 ETETIEGSGEREEPTTSAPAAEATSEITLLKSSSDVAVIENVKRIRPRTEQTHCQQYASC 686
Query: 477 Y 479
+
Sbjct: 687 W 687
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 279 KELAEVYETQSLLFSGNNETKTLEAPSIDTTDNQLTLESN 398
+E + ET L G++ET + P + TTD ESN
Sbjct: 28 REALKSSETTDLALPGSHETTEVALPDVKTTDIDTLGESN 67
>Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 300 ETQSLLFSGNNETKTLEAPSIDTTDNQLTLESNVSGQYF-NVESILVRESENLMEQATEC 476
ET+++ SG E T AP+ + T L+S+ NV+ I R + +Q C
Sbjct: 627 ETETIEGSGEREEPTTSAPAAEATSEITLLKSSSDVAVIENVKRIRPRTEQTHCQQYASC 686
Query: 477 Y 479
+
Sbjct: 687 W 687
>Z81132-1|CAB03430.1| 361|Caenorhabditis elegans Hypothetical
protein T26E4.1 protein.
Length = 361
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 270 YPYKELAEVYETQSLLFSGNNETKTLEAPSIDTTDNQLTL 389
+P +A+ +LFS NNE +T ++ D N L +
Sbjct: 297 FPSLVVAQTLANTKILFSNNNEIRTSDSTYCDRLKNMLNI 336
>Z50795-2|CAA90663.1| 618|Caenorhabditis elegans Hypothetical
protein R166.2 protein.
Length = 618
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +2
Query: 11 FYIYTMLTLYNFITIFIYYRLNQKLTTEYEYSVLKNL----MSYLLIFIFINDNLWIVQE 178
+Y + + LY F+ F + + +L Y+ + +L ++Y I FI+D V
Sbjct: 478 WYSWVLNMLYGFLLTFGFITMTPQLFINYKLKSVAHLPWRMLTYKFINTFIDDLFAFVIR 537
Query: 179 MPIVEKL 199
MP++ ++
Sbjct: 538 MPLLYRI 544
>AC024801-7|AAK95892.2| 606|Caenorhabditis elegans Hypothetical
protein Y50D7A.2 protein.
Length = 606
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 44 FITIFIYYRLNQKLTTEYEYSVLKNLMSYLLIFIFINDNL 163
F T ++Y + + YE ++ LM Y L+FI ND L
Sbjct: 383 FFTSYLY--MENVIGVWYEQHIIDELMKYKLLFIETNDAL 420
>AC006642-8|AAF39827.2| 365|Caenorhabditis elegans Laterally
symmetric (defectivein lateral asymmetry) protein 2,
isoform a protein.
Length = 365
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/101 (18%), Positives = 41/101 (40%)
Frame = +3
Query: 381 LTLESNVSGQYFNVESILVRESENLMEQATECYVVQDDNLFNFESTLLDENTVNQFLLPA 560
LT + Q + + L + + M + V + + ++DE +Q+ +
Sbjct: 2 LTRRNAKQSQRNSADQSLSEFNSSSMTHGSNQSVYHHNQHMDDSEMMMDEQDYSQYQM-- 59
Query: 561 KGSTEANRDEQNGPDVLALHSCVICHEIFTTESDLLDHTIL 683
G E + + A+H C +C++IF + L H ++
Sbjct: 60 -GFPEEDEMVEGMMTPRAVHQCNVCNKIFVSYKGLQQHAVI 99
>AC006615-4|AAK68233.2| 602|Caenorhabditis elegans Hypothetical
protein C36B7.6 protein.
Length = 602
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +2
Query: 11 FYIYTMLTLYNFITIFIYYRLNQKLTTEYEYSVLKNL----MSYLLIFIFINDNLWIVQE 178
+Y + + LY ++ +F + + +L Y+ + +L ++Y I FI+D V +
Sbjct: 473 WYSWVLNMLYGYLLMFGFITMTPQLFINYKLKSVAHLPWRMLTYKFINTFIDDLFAFVIK 532
Query: 179 MPIVEKL 199
MP++ ++
Sbjct: 533 MPLLYRI 539
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,657,340
Number of Sequences: 27780
Number of extensions: 342071
Number of successful extensions: 997
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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