Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30c19
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.26 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.80 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.3  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   4.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.4  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   7.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.8  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   9.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   9.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = -3

Query: 696 CSYWFIFNLLLFCYA---FNLLIVLFQCLYH 613
           C Y+F +  LLFC A   F + ++   C+Y+
Sbjct: 257 CIYYFYYMHLLFCCAFIIFTMHLLFLLCIYY 287



 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = -1

Query: 707 FAFDVVIGLFLIYYFSVTLLIYLLFYSNVY 618
           +AF +++ ++  YY  +   ++LLF   +Y
Sbjct: 105 YAFIILLCVYYFYYAFIIFTVHLLFLLCIY 134



 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 696 CSYWFIFNLLLFCYAFNLLIVLFQCLY 616
           C Y+F +  +LF     LL+ ++   Y
Sbjct: 237 CIYYFYYAFILFTVHLLLLVCIYYFYY 263



 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -3

Query: 696 CSYWFIFNLLLFCYAFNLLIVLFQCLYH 613
           CS +F  +LL +C      +    C Y+
Sbjct: 75  CSGYFTVHLLFYCPFIIFTVHFLLCTYY 102


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 408 NSERLFTCNYIVSVR*DIYDDYDITALRTHDG 503
           NSER     Y V+V  D+    +ITA+ T+DG
Sbjct: 456 NSERNQIGQY-VTVNGDVVSHLNITAIHTNDG 486


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 166 LDFILSKLKITVHKWSP 116
           L ++LS+  I+VH WSP
Sbjct: 222 LVWLLSQAWISVHIWSP 238


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 269 VFITVIFASFYAY*FG 222
           V +  IFAS++AY FG
Sbjct: 380 VLLINIFASYFAYIFG 395



 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 160 FILSKLKITVHKWSP 116
           ++LS+  IT+H W+P
Sbjct: 470 WLLSQTWITLHIWTP 484


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 269 VFITVIFASFYAY*FG 222
           V +  IFAS++AY FG
Sbjct: 380 VLLINIFASYFAYIFG 395



 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 160 FILSKLKITVHKWSP 116
           ++LS+  IT+H W+P
Sbjct: 470 WLLSQTWITLHIWTP 484


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 166 LDFILSKLKITVHKWSP 116
           L ++LS+  I+VH WSP
Sbjct: 455 LVWLLSQAWISVHIWSP 471


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 166 LDFILSKLKITVHKWSP 116
           L ++LS+  I+VH WSP
Sbjct: 455 LVWLLSQAWISVHIWSP 471


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 269 VFITVIFASFYAY*FG 222
           V +  IFAS++AY FG
Sbjct: 380 VLLINIFASYFAYIFG 395



 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 160 FILSKLKITVHKWSP 116
           ++LS+  IT+H W+P
Sbjct: 470 WLLSQTWITLHIWTP 484


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 269 VFITVIFASFYAY*FG 222
           V +  IFAS++AY FG
Sbjct: 380 VLLINIFASYFAYIFG 395



 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 160 FILSKLKITVHKWSP 116
           ++LS+  IT+H W+P
Sbjct: 470 WLLSQTWITLHIWTP 484


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 657 YAFNLLIVLFQCLYH 613
           Y  + L++LF CL H
Sbjct: 267 YGVHTLLILFSCLLH 281


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 684 FIFNLLLFCYAFNLLIVL 631
           + FNL   C+ F  L+V+
Sbjct: 317 YTFNLFYLCFCFYWLLVM 334


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 54  FFHLLAMKYSSCLNTITVIII 116
           FFH+      S LNT++ ++I
Sbjct: 295 FFHVKKSTIFSILNTVSTLLI 315


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 684 FIFNLLLFCYAFNLLIVL 631
           + FNL   C+ F  L+V+
Sbjct: 273 YTFNLFYLCFCFYWLLVM 290


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/26 (23%), Positives = 13/26 (50%)
 Frame = +3

Query: 546 CFRDTNRCRNLGILIIWGLYSTDGIN 623
           C++DT     + + + W  Y+   I+
Sbjct: 377 CWQDTKSANKIAMKLFWAQYTNKMID 402


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 683 LFLIYYFSVTLLIYL 639
           LFLI Y ++ +L+YL
Sbjct: 230 LFLITYATLQILVYL 244


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 683 LFLIYYFSVTLLIYL 639
           LFLI Y ++ +L+YL
Sbjct: 230 LFLITYATLQILVYL 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,044
Number of Sequences: 336
Number of extensions: 3479
Number of successful extensions: 31
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)