Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30c15
         (672 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084197-44|AAG23461.3|  131|Caenorhabditis elegans Hypothetical...    30   1.7  
U97017-4|AAB52358.1|  156|Caenorhabditis elegans Hypothetical pr...    28   6.9  
U97013-2|AAV58868.1|  190|Caenorhabditis elegans Hypothetical pr...    28   6.9  
U97013-1|AAB52340.2|  270|Caenorhabditis elegans Hypothetical pr...    28   6.9  
AL033514-32|CAA22112.1|  344|Caenorhabditis elegans Hypothetical...    27   9.2  
AF000266-7|AAC71173.1|  212|Caenorhabditis elegans Hypothetical ...    27   9.2  

>AC084197-44|AAG23461.3|  131|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.27 protein.
          Length = 131

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = -1

Query: 348 FTSTIQNLTWRVRERCFHIPHQKKTRLA-ENLSSRF 244
           F + I+++TW++++ C H+  +KK   + EN  S+F
Sbjct: 93  FPAEIEDITWKLKKDCCHLTIKKKVAQSWENQMSQF 128


>U97017-4|AAB52358.1|  156|Caenorhabditis elegans Hypothetical
           protein F47B3.3 protein.
          Length = 156

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -1

Query: 534 TTFFLTLKPALYP-ISWNAFLKLLDVFIKNSLLT 436
           T  F+ + PA Y  + W  F+  + +F+  SLLT
Sbjct: 12  TFIFVMMGPAYYTGVGWATFVSSVGIFVTTSLLT 45


>U97013-2|AAV58868.1|  190|Caenorhabditis elegans Hypothetical
           protein F28H1.4b protein.
          Length = 190

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -1

Query: 534 TTFFLTLKPALYP-ISWNAFLKLLDVFIKNSLLT 436
           T  F+ + PA Y  + W  F+  + +F+  SLLT
Sbjct: 57  TFIFVMMGPAYYTGVGWATFVSSVGIFVTTSLLT 90


>U97013-1|AAB52340.2|  270|Caenorhabditis elegans Hypothetical
           protein F28H1.4a protein.
          Length = 270

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -1

Query: 534 TTFFLTLKPALYP-ISWNAFLKLLDVFIKNSLLT 436
           T  F+ + PA Y  + W  F+  + +F+  SLLT
Sbjct: 137 TFIFVMMGPAYYTGVGWATFVSSVGIFVTTSLLT 170


>AL033514-32|CAA22112.1|  344|Caenorhabditis elegans Hypothetical
           protein Y75B8A.34 protein.
          Length = 344

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 122 LLVIIVIY*RTKLFYKNHSLFIINSNKRPVFLLS 223
           LL+  ++Y  T++FY+  + F+I      +FL+S
Sbjct: 259 LLITAILYGVTQIFYEAIAFFLITETSLKLFLIS 292


>AF000266-7|AAC71173.1|  212|Caenorhabditis elegans Hypothetical
           protein W08F4.9 protein.
          Length = 212

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 20/82 (24%), Positives = 39/82 (47%)
 Frame = +2

Query: 2   DIISVCTYYNIRCIFKISCYNFQVRRYAIN*SGFGVKSWNLLVIIVIY*RTKLFYKNHSL 181
           +I ++C+ +  R I   S  + +V+ + +    FG    NL +++V   +  L      L
Sbjct: 43  EIKTICSLFENRKIASCSTTSTEVQGHHL----FGTHPENLEIVVVPIRKELLVQNYEEL 98

Query: 182 FIINSNKRPVFLLSNHTEKSLN 247
            + N     VFL ++ T +SL+
Sbjct: 99  KVTNLTLNEVFLSNSRTLRSLH 120


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,510,873
Number of Sequences: 27780
Number of extensions: 286396
Number of successful extensions: 536
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)