Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30c15
(672 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 25 0.50
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 25 0.50
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 25 0.50
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.5
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 2.6
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 25.4 bits (53), Expect = 0.50
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = -3
Query: 502 LSNFLECLLEAARCVYQ----KLITD*SLSITNKKCSQYI*VIQWSILKFDYIVNIHIYY 335
L+N+ +CL++ RC + K + +L+ KKC+ + ++KF +
Sbjct: 44 LNNYFKCLMDEGRCTAEGNELKRVLPDALATDCKKCTDKQREVIKKVIKF-------LVE 96
Query: 334 TKPHLAGTRAMLSYSPSKK 278
KP L + A Y P KK
Sbjct: 97 NKPELWDSLAN-KYDPDKK 114
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 25.4 bits (53), Expect = 0.50
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = -3
Query: 502 LSNFLECLLEAARCVYQ----KLITD*SLSITNKKCSQYI*VIQWSILKFDYIVNIHIYY 335
L+N+ +CL++ RC + K + +L+ KKC+ + ++KF +
Sbjct: 44 LNNYFKCLMDEGRCTAEGNELKRVLPDALATDCKKCTDKQREVIKKVIKF-------LVE 96
Query: 334 TKPHLAGTRAMLSYSPSKK 278
KP L + A Y P KK
Sbjct: 97 NKPELWDSLAN-KYDPDKK 114
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 25.4 bits (53), Expect = 0.50
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = -3
Query: 502 LSNFLECLLEAARCVYQ----KLITD*SLSITNKKCSQYI*VIQWSILKFDYIVNIHIYY 335
L+N+ +CL++ RC + K + +L+ KKC+ + ++KF +
Sbjct: 44 LNNYFKCLMDEGRCTAEGNELKRVLPDALATDCKKCTDKQREVIKKVIKF-------LVE 96
Query: 334 TKPHLAGTRAMLSYSPSKK 278
KP L + A Y P KK
Sbjct: 97 NKPELWDSLAN-KYDPDKK 114
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 225 LLSKNTGLLLEFIMNNEWFL 166
L S+ G L +FI N EW+L
Sbjct: 143 LSSETGGDLSDFITNGEWYL 162
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 225 LLSKNTGLLLEFIMNNEWFL 166
L S+ G L +FI N EW+L
Sbjct: 143 LSSETGGDLSDFITNGEWYL 162
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 225 LLSKNTGLLLEFIMNNEWFL 166
L S+ G L +FI N EW+L
Sbjct: 143 LSSETGGDLSDFITNGEWYL 162
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 225 LLSKNTGLLLEFIMNNEWFL 166
L S+ G L +FI N EW+L
Sbjct: 143 LSSETGGDLSDFITNGEWYL 162
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 225 LLSKNTGLLLEFIMNNEWFL 166
L S+ G L +FI N EW+L
Sbjct: 143 LSSETGGDLSDFITNGEWYL 162
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 225 LLSKNTGLLLEFIMNNEWFL 166
L S+ G L +FI N EW+L
Sbjct: 143 LSSETGGDLSDFITNGEWYL 162
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 225 LLSKNTGLLLEFIMNNEWFL 166
L S+ G L +FI N EW+L
Sbjct: 211 LSSETGGDLSDFITNGEWYL 230
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 225 LLSKNTGLLLEFIMNNEWFL 166
L S+ G L +FI N EW+L
Sbjct: 211 LSSETGGDLSDFITNGEWYL 230
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 295 MKASLSYPPSEVLYSRC 345
+K S+SYP +E L ++C
Sbjct: 339 IKISVSYPSTETLNTKC 355
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,910
Number of Sequences: 438
Number of extensions: 3612
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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