Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30c09
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.5  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   3.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.5  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   6.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +3

Query: 120 VAAIIRKNKLLKVSLFDHEFHTDCFEQSGDAQI*RSGGALRCY 248
           +  +++K+KLL++      F T C E S      R    L CY
Sbjct: 94  ICTLLKKDKLLELFKRLIHFDTKCQENSTVIDYKRHKKRLLCY 136


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +3

Query: 120 VAAIIRKNKLLKVSLFDHEFHTDCFEQSGDAQI*RSGGALRCY 248
           +  +++K+KLL++      F T C E S      R    L CY
Sbjct: 112 ICTLLKKDKLLELFKRLIHFDTKCQENSTVIDYKRHKKRLLCY 154


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +1

Query: 607 PLGWPVGGFPAPPGP 651
           PL W     P+PP P
Sbjct: 63  PLAWQANSPPSPPAP 77


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 448 NHILVLADTYQFNYQPTSSNHRKNCTII 531
           N +++L D Y   Y   ++N  K CT +
Sbjct: 224 NFVVLLGDLYVTLYIILTNNQAKYCTTL 251


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 376 QANPDNSDTFIFPEVIYHD 432
           Q NPDN + +   E +Y D
Sbjct: 368 QLNPDNPNVYEILEKLYKD 386


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +3

Query: 426 PRPV*TWKPHISVS 467
           PRPV TWK    VS
Sbjct: 726 PRPVVTWKRATGVS 739


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,406
Number of Sequences: 336
Number of extensions: 4465
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)