Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30c06
(404 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P19404 Cluster: NADH dehydrogenase [ubiquinone] flavopr... 81 1e-14
UniRef50_Q5ACX6 Cluster: Potential mitochondrial Complex I, NUHM... 70 2e-11
UniRef50_Q2TZN8 Cluster: NADH:ubiquinone oxidoreductase; n=11; P... 66 2e-10
UniRef50_Q9UUT9 Cluster: Subunit NUHM of protein NADH:Ubiquinone... 66 3e-10
UniRef50_Q0C8X0 Cluster: Putative uncharacterized protein; n=1; ... 65 4e-10
UniRef50_O22769 Cluster: NADH-ubiquinone oxidoreductase 24 kDa s... 65 6e-10
UniRef50_Q00RX3 Cluster: Putative NADH-ubiquinone oxidoreductase... 60 2e-08
UniRef50_Q54F10 Cluster: NADH dehydrogenase; n=1; Dictyostelium ... 58 5e-08
UniRef50_Q6V9B3 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 57 2e-07
UniRef50_Q9VVF0 Cluster: CG6485-PA; n=2; Sophophora|Rep: CG6485-... 54 8e-07
UniRef50_A0E600 Cluster: Chromosome undetermined scaffold_8, who... 54 1e-06
UniRef50_Q5DLW2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kD... 50 2e-05
UniRef50_Q11VB6 Cluster: NADH dehydrogenase I chain E; n=2; Bact... 42 0.006
UniRef50_Q1GTK2 Cluster: NADH-quinone oxidoreductase, E subunit;... 41 0.008
UniRef50_Q0BSK6 Cluster: NADH-quinone oxidoreductase chain E; n=... 41 0.011
UniRef50_A3U1M2 Cluster: ATP synthase subunit E; n=9; Alphaprote... 40 0.014
UniRef50_A2F771 Cluster: Respiratory-chain NADH dehydrogenase 24... 40 0.014
UniRef50_Q4QEG7 Cluster: NADH-ubiquinone oxidoreductase, mitocho... 40 0.019
UniRef50_Q2GDD2 Cluster: NADH dehydrogenase I, E subunit; n=1; N... 40 0.025
UniRef50_Q67P18 Cluster: NADH dehydrogenase I subunit E; n=1; Sy... 37 0.13
UniRef50_Q4UM09 Cluster: NADH-quinone oxidoreductase subunit E; ... 37 0.13
UniRef50_A5NY87 Cluster: NADH-quinone oxidoreductase, E subunit;... 37 0.18
UniRef50_A3UCV4 Cluster: ATP synthase subunit E; n=4; Alphaprote... 35 0.54
UniRef50_P56909 Cluster: NADH-quinone oxidoreductase subunit E 1... 35 0.54
UniRef50_Q98KQ9 Cluster: NADH-ubiquinone dehydrogenase chain E 1... 34 0.94
UniRef50_P29914 Cluster: NADH-quinone oxidoreductase chain 2; n=... 34 0.94
UniRef50_O13691 Cluster: Probable NADH-ubiquinone oxidoreductase... 34 0.94
UniRef50_A7PC77 Cluster: Chromosome chr2 scaffold_11, whole geno... 33 1.6
UniRef50_UPI000023F6A2 Cluster: hypothetical protein FG10337.1; ... 33 2.9
UniRef50_Q02CT9 Cluster: NADH-quinone oxidoreductase, E subunit;... 33 2.9
UniRef50_Q8G1B3 Cluster: NADH dehydrogenase I, E subunit; n=9; R... 32 3.8
UniRef50_Q388Q2 Cluster: Putative uncharacterized protein; n=1; ... 32 3.8
UniRef50_A2D7V5 Cluster: Dolichyl-phosphate-mannose-protein mann... 32 5.0
UniRef50_Q4RAB4 Cluster: Chromosome undetermined SCAF24069, whol... 31 8.7
UniRef50_Q2JFL6 Cluster: NADH-quinone oxidoreductase, E subunit;... 31 8.7
UniRef50_A2Y357 Cluster: Putative uncharacterized protein; n=1; ... 31 8.7
>UniRef50_P19404 Cluster: NADH dehydrogenase [ubiquinone]
flavoprotein 2, mitochondrial precursor; n=64; cellular
organisms|Rep: NADH dehydrogenase [ubiquinone]
flavoprotein 2, mitochondrial precursor - Homo sapiens
(Human)
Length = 249
Score = 80.6 bits (190), Expect = 1e-14
Identities = 33/52 (63%), Positives = 43/52 (82%)
Frame = +3
Query: 249 SLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
+LFVHRDTPE+NP PF+F+ N KR+EA++ YPEGHK A++P+LDLAQR
Sbjct: 37 ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQR 88
>UniRef50_Q5ACX6 Cluster: Potential mitochondrial Complex I,
NUHM_24kd subunit; n=5; Saccharomycetales|Rep: Potential
mitochondrial Complex I, NUHM_24kd subunit - Candida
albicans (Yeast)
Length = 243
Score = 69.7 bits (163), Expect = 2e-11
Identities = 30/49 (61%), Positives = 38/49 (77%)
Frame = +3
Query: 258 VHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
VHRDT EDNP+I FEF+ N+KR E ++A YP +K+GA +PLLDL QR
Sbjct: 31 VHRDTKEDNPNIAFEFNSENKKRAEEIIAKYPPQYKKGACMPLLDLGQR 79
>UniRef50_Q2TZN8 Cluster: NADH:ubiquinone oxidoreductase; n=11;
Pezizomycotina|Rep: NADH:ubiquinone oxidoreductase -
Aspergillus oryzae
Length = 270
Score = 66.5 bits (155), Expect = 2e-10
Identities = 28/53 (52%), Positives = 40/53 (75%)
Frame = +3
Query: 246 DSLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
DSL VHR+ P +NPSIPF F++ NQ+ ++ +L YP +K+ A++PLLDL QR
Sbjct: 37 DSLSVHRNKPTNNPSIPFTFNEQNQRLIDEILKRYPPQYKKAAVMPLLDLGQR 89
>UniRef50_Q9UUT9 Cluster: Subunit NUHM of protein NADH:Ubiquinone
Oxidoreductase; n=3; Fungi/Metazoa group|Rep: Subunit
NUHM of protein NADH:Ubiquinone Oxidoreductase -
Yarrowia lipolytica (Candida lipolytica)
Length = 243
Score = 65.7 bits (153), Expect = 3e-10
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = +3
Query: 258 VHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
VHR+T +NPSIPFEFS N KR E ++A YP +K+ A++PLLD+ QR
Sbjct: 32 VHRNTENNNPSIPFEFSPENMKRAEEVIAKYPPQYKKAAVMPLLDIGQR 80
>UniRef50_Q0C8X0 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 312
Score = 65.3 bits (152), Expect = 4e-10
Identities = 27/53 (50%), Positives = 40/53 (75%)
Frame = +3
Query: 246 DSLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
DSL VHR+ P +NPSIPF+F++ N K ++ +L YP +K+ A++P+LDL QR
Sbjct: 134 DSLSVHRNKPNNNPSIPFKFNEQNLKLIDEILKRYPPQYKKAAVMPILDLGQR 186
>UniRef50_O22769 Cluster: NADH-ubiquinone oxidoreductase 24 kDa
subunit, mitochondrial precursor; n=8;
Viridiplantae|Rep: NADH-ubiquinone oxidoreductase 24 kDa
subunit, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 255
Score = 64.9 bits (151), Expect = 6e-10
Identities = 26/52 (50%), Positives = 41/52 (78%)
Frame = +3
Query: 249 SLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
+L H D+P++ P +P+EFS+ANQ +V+ +L+ YP +K+ A+IPLLDLAQ+
Sbjct: 31 ALNYHLDSPDNKPDLPWEFSEANQSKVKEILSYYPSNYKQSAVIPLLDLAQQ 82
>UniRef50_Q00RX3 Cluster: Putative NADH-ubiquinone oxidoreductase;
n=1; Ostreococcus tauri|Rep: Putative NADH-ubiquinone
oxidoreductase - Ostreococcus tauri
Length = 265
Score = 59.7 bits (138), Expect = 2e-08
Identities = 26/49 (53%), Positives = 36/49 (73%)
Frame = +3
Query: 258 VHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
VHRD PEDN ++ + F + + +V+A+L YP +KR AMIPLLDLAQ+
Sbjct: 26 VHRDVPEDNSTMTWTFEASVRPKVDAILRRYPSNYKRSAMIPLLDLAQQ 74
>UniRef50_Q54F10 Cluster: NADH dehydrogenase; n=1; Dictyostelium
discoideum AX4|Rep: NADH dehydrogenase - Dictyostelium
discoideum AX4
Length = 247
Score = 58.4 bits (135), Expect = 5e-08
Identities = 26/53 (49%), Positives = 39/53 (73%)
Frame = +3
Query: 246 DSLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
D+L H +T ++N PF+F+Q N +VE +LA YP+ +++ A+IPLLDLAQR
Sbjct: 35 DALSRHVETEDNNEHTPFDFTQENLVKVEKILAKYPKQYRQSALIPLLDLAQR 87
>UniRef50_Q6V9B3 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=2; cellular organisms|Rep: NADH:ubiquinone
oxidoreductase 24 kD subunit - Chlamydomonas reinhardtii
Length = 282
Score = 56.8 bits (131), Expect = 2e-07
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +3
Query: 246 DSLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
D +H+DTPE+N + FEFS+A K V ++A YP +K+ A+IP+LD+ Q+
Sbjct: 46 DIFNIHKDTPENNAATSFEFSEATLKVVNDIIARYPPNYKQSAIIPVLDVTQQ 98
>UniRef50_Q9VVF0 Cluster: CG6485-PA; n=2; Sophophora|Rep: CG6485-PA
- Drosophila melanogaster (Fruit fly)
Length = 238
Score = 54.4 bits (125), Expect = 8e-07
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = +3
Query: 276 EDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
E ++ FEFS+ NQ+RV+ALLA YP+ +GA++PLLD+AQR
Sbjct: 27 EIRKALKFEFSKDNQRRVKALLAWYPQAEWKGALLPLLDIAQR 69
>UniRef50_A0E600 Cluster: Chromosome undetermined scaffold_8, whole
genome shotgun sequence; n=5; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_8, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 263
Score = 53.6 bits (123), Expect = 1e-06
Identities = 23/53 (43%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = +3
Query: 249 SLFV-HRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
++FV HR+ +++ S+PF+F+ N K++EA+LA +P K+ IPLL LAQ+
Sbjct: 19 NIFVAHRNRDDNSDSVPFDFTDENYKKIEAILAKFPSNEKKSGTIPLLMLAQK 71
>UniRef50_Q5DLW2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kDa
subunit; n=1; Nyctotherus ovalis|Rep: Hydrogenosomal
NADH dehydrogenase 24 kDa subunit - Nyctotherus ovalis
Length = 259
Score = 50.0 bits (114), Expect = 2e-05
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +3
Query: 252 LFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
L H +TPE+N FEF+ N K + +LL YP+ +K+ A++ LL LAQ+
Sbjct: 26 LVTHHETPENNDDTYFEFTPENYKIINSLLKRYPDNYKKSAVLYLLHLAQK 76
>UniRef50_Q11VB6 Cluster: NADH dehydrogenase I chain E; n=2;
Bacteroidetes|Rep: NADH dehydrogenase I chain E -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 177
Score = 41.5 bits (93), Expect = 0.006
Identities = 15/35 (42%), Positives = 28/35 (80%)
Frame = +3
Query: 297 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQ 401
F+FS+A+ K+++ + A YPEG ++ A++P+L +AQ
Sbjct: 8 FQFSEASLKKIQEMKARYPEGRQKSALLPVLHMAQ 42
>UniRef50_Q1GTK2 Cluster: NADH-quinone oxidoreductase, E subunit;
n=8; Alphaproteobacteria|Rep: NADH-quinone
oxidoreductase, E subunit - Sphingopyxis alaskensis
(Sphingomonas alaskensis)
Length = 222
Score = 41.1 bits (92), Expect = 0.008
Identities = 17/36 (47%), Positives = 27/36 (75%)
Frame = +3
Query: 297 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
F ++ N ++ +A++A YP G +R A++PLLDLAQR
Sbjct: 20 FAWTAENAEKAKAVIARYPAGRQRSAVMPLLDLAQR 55
>UniRef50_Q0BSK6 Cluster: NADH-quinone oxidoreductase chain E; n=5;
Rhodospirillales|Rep: NADH-quinone oxidoreductase chain
E - Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 227
Score = 40.7 bits (91), Expect = 0.011
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +3
Query: 297 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
F F +++R+E +LA YP + A++PLLDLAQR
Sbjct: 20 FSFDVQSEQRIEIILAKYPPARRASAVMPLLDLAQR 55
>UniRef50_A3U1M2 Cluster: ATP synthase subunit E; n=9;
Alphaproteobacteria|Rep: ATP synthase subunit E -
Oceanicola batsensis HTCC2597
Length = 460
Score = 40.3 bits (90), Expect = 0.014
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +3
Query: 258 VHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQ 401
+H+D PE F F+ NQK EA + YPEG + A+IPLL AQ
Sbjct: 5 LHKDQPES-----FAFTPENQKWAEAQMTKYPEGRQASAIIPLLWRAQ 47
>UniRef50_A2F771 Cluster: Respiratory-chain NADH dehydrogenase 24 Kd
subunit family protein; n=2; Trichomonas vaginalis|Rep:
Respiratory-chain NADH dehydrogenase 24 Kd subunit
family protein - Trichomonas vaginalis G3
Length = 201
Score = 40.3 bits (90), Expect = 0.014
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +3
Query: 300 EFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
+F ++Q +V+A+LA YP+ +KR A IPLL L QR
Sbjct: 24 DFKFSDQSKVDAILAKYPKENKRAATIPLLHLGQR 58
>UniRef50_Q4QEG7 Cluster: NADH-ubiquinone oxidoreductase,
mitochondrial, putative; n=6; Trypanosomatidae|Rep:
NADH-ubiquinone oxidoreductase, mitochondrial, putative
- Leishmania major
Length = 273
Score = 39.9 bits (89), Expect = 0.019
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +3
Query: 261 HRDTPEDNPSIPFEFSQANQKRVE-ALLAIYPEGHKRGAMIPLLDLAQR 404
H++T DN IP++F+ ++ +++ +L +P G + A IPLL LAQ+
Sbjct: 40 HQNTDYDNTRIPWDFTTSSYEKIHNEILPKFPRGRRISATIPLLHLAQQ 88
>UniRef50_Q2GDD2 Cluster: NADH dehydrogenase I, E subunit; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: NADH
dehydrogenase I, E subunit - Neorickettsia sennetsu
(strain Miyayama)
Length = 181
Score = 39.5 bits (88), Expect = 0.025
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +3
Query: 297 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
F FS+ N + V +LA YP KR A++PLL L QR
Sbjct: 24 FCFSEENSREVARILAKYPASRKRSAVLPLLHLVQR 59
>UniRef50_Q67P18 Cluster: NADH dehydrogenase I subunit E; n=1;
Symbiobacterium thermophilum|Rep: NADH dehydrogenase I
subunit E - Symbiobacterium thermophilum
Length = 274
Score = 37.1 bits (82), Expect = 0.13
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +3
Query: 294 PFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
P + + + VEA+L YPEG +R A++PLL LA R
Sbjct: 7 PPRWPETCKDEVEAILRRYPEGRERSAILPLLHLAMR 43
>UniRef50_Q4UM09 Cluster: NADH-quinone oxidoreductase subunit E;
n=18; Alphaproteobacteria|Rep: NADH-quinone
oxidoreductase subunit E - Rickettsia felis (Rickettsia
azadi)
Length = 167
Score = 37.1 bits (82), Expect = 0.13
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 288 SIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
S F F + N E ++ YP KR A++PLLDLAQR
Sbjct: 2 STNFTFDKKNLNLAEDIIKKYPPHGKRSAILPLLDLAQR 40
>UniRef50_A5NY87 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Methylobacterium sp. 4-46|Rep: NADH-quinone
oxidoreductase, E subunit - Methylobacterium sp. 4-46
Length = 394
Score = 36.7 bits (81), Expect = 0.18
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +3
Query: 264 RDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQ 401
R P + F F+ N + EA +A YPEG + A+IPLL AQ
Sbjct: 5 RLAPAEQQPAAFAFTPENARWAEAQIAKYPEGRQASAVIPLLWRAQ 50
>UniRef50_A3UCV4 Cluster: ATP synthase subunit E; n=4;
Alphaproteobacteria|Rep: ATP synthase subunit E -
Oceanicaulis alexandrii HTCC2633
Length = 346
Score = 35.1 bits (77), Expect = 0.54
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +3
Query: 297 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
F F++ ++ +V+ LA YPE K A+IPLL +AQ+
Sbjct: 14 FAFNEKSEAKVKFWLAKYPEERKASAVIPLLWIAQK 49
>UniRef50_P56909 Cluster: NADH-quinone oxidoreductase subunit E 1;
n=21; Rhizobiales|Rep: NADH-quinone oxidoreductase
subunit E 1 - Rhizobium meliloti (Sinorhizobium
meliloti)
Length = 275
Score = 35.1 bits (77), Expect = 0.54
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +3
Query: 297 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQ 401
F FS+ N EA + YPEG ++ A+IPLL AQ
Sbjct: 16 FAFSKENAAWAEATIKKYPEGREQSAVIPLLMRAQ 50
>UniRef50_Q98KQ9 Cluster: NADH-ubiquinone dehydrogenase chain E 1;
n=3; Bacteria|Rep: NADH-ubiquinone dehydrogenase chain E
1 - Rhizobium loti (Mesorhizobium loti)
Length = 424
Score = 34.3 bits (75), Expect = 0.94
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +3
Query: 291 IPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQ 401
+ F F++AN + + YP+G ++ A+IPLL LAQ
Sbjct: 14 VSFAFNRANAAAAKQWIKKYPKGREQSAIIPLLMLAQ 50
>UniRef50_P29914 Cluster: NADH-quinone oxidoreductase chain 2; n=22;
Alphaproteobacteria|Rep: NADH-quinone oxidoreductase
chain 2 - Paracoccus denitrificans
Length = 239
Score = 34.3 bits (75), Expect = 0.94
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +3
Query: 297 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQ 401
FEF+ AN + A + YPEG ++ A+IP+L AQ
Sbjct: 13 FEFTPANLEWARAQMTKYPEGRQQSAIIPVLWRAQ 47
>UniRef50_O13691 Cluster: Probable NADH-ubiquinone oxidoreductase 24
kDa subunit, mitochondrial precursor; n=1;
Schizosaccharomyces pombe|Rep: Probable NADH-ubiquinone
oxidoreductase 24 kDa subunit, mitochondrial precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 162
Score = 34.3 bits (75), Expect = 0.94
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 303 FSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
F N + +A+LA YP + A++PLLDLAQR
Sbjct: 7 FKPENLQLAKAILARYPLRFQSAALVPLLDLAQR 40
>UniRef50_A7PC77 Cluster: Chromosome chr2 scaffold_11, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_11, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 65
Score = 33.5 bits (73), Expect = 1.6
Identities = 13/27 (48%), Positives = 22/27 (81%)
Frame = +3
Query: 249 SLFVHRDTPEDNPSIPFEFSQANQKRV 329
+L H D+ ++NPSIP+EF+ AN+++V
Sbjct: 26 ALNYHLDSLDNNPSIPWEFNDANKEKV 52
>UniRef50_UPI000023F6A2 Cluster: hypothetical protein FG10337.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG10337.1 - Gibberella zeae PH-1
Length = 932
Score = 32.7 bits (71), Expect = 2.9
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -3
Query: 402 VVPDPVKESWHLACDLQGKWPTKPLLSFDWPARTQRECSGCPQE 271
++P P E+W CDL+G T P L+ R GCP E
Sbjct: 199 MIPPPKSETWDKGCDLEGLKETDPGLAIATSVPIHR--LGCPDE 240
>UniRef50_Q02CT9 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Solibacter usitatus Ellin6076|Rep: NADH-quinone
oxidoreductase, E subunit - Solibacter usitatus (strain
Ellin6076)
Length = 160
Score = 32.7 bits (71), Expect = 2.9
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 318 QKRVEALLAIYPEGHKRGAMIPLLDLAQ 401
+ R E LL YP G +R AMIP+L AQ
Sbjct: 8 EARFEKLLTSYPPGRQRSAMIPMLMYAQ 35
>UniRef50_Q8G1B3 Cluster: NADH dehydrogenase I, E subunit; n=9;
Rhizobiales|Rep: NADH dehydrogenase I, E subunit -
Brucella suis
Length = 237
Score = 32.3 bits (70), Expect = 3.8
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 297 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQ 401
F F+ N+ +A YPEG ++ A+IPLL AQ
Sbjct: 16 FAFNAENEAWAHKTIAKYPEGRQQSAVIPLLMRAQ 50
>UniRef50_Q388Q2 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 131
Score = 32.3 bits (70), Expect = 3.8
Identities = 18/64 (28%), Positives = 38/64 (59%), Gaps = 7/64 (10%)
Frame = -3
Query: 174 GWI--TFF*LYXNLL*KLYCETLFANRFVLLTTSAQTSYLTHXT-----VRSKTSTYXYC 16
GW+ TF+ L+ LL + C++++++ + ++ + + + LT T +S+T+TY YC
Sbjct: 45 GWLHMTFY-LFSVLLKRKGCKSVYSSACITISDNNKNNRLTKPTGSRTGTKSRTTTYLYC 103
Query: 15 QYIP 4
+P
Sbjct: 104 GCVP 107
>UniRef50_A2D7V5 Cluster: Dolichyl-phosphate-mannose-protein
mannosyltransferase, putative; n=1; Trichomonas
vaginalis G3|Rep: Dolichyl-phosphate-mannose-protein
mannosyltransferase, putative - Trichomonas vaginalis G3
Length = 486
Score = 31.9 bits (69), Expect = 5.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 164 HFFDCIXICYKSYIAKHCSRTDSFCSQLQLKLHIS 60
HFF C+ IC +Y KH +F + + L L IS
Sbjct: 154 HFFSCLHICAFTYFIKHQDFISTFIAGITLGLAIS 188
>UniRef50_Q4RAB4 Cluster: Chromosome undetermined SCAF24069, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF24069, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 132
Score = 31.1 bits (67), Expect = 8.7
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -2
Query: 340 NKASTLF*LACENSKGMLGLSSGVSRWTNRLSCCLDAVVXIDLEDIRHKPCTPVL 176
++ TL LA ++G GL + RW + + +D + +D D+ H CTP++
Sbjct: 30 SRGMTLLHLAA--AQGYAGLIQTLIRWRTKHADSIDLELEVDPLDVDHFSCTPLM 82
>UniRef50_Q2JFL6 Cluster: NADH-quinone oxidoreductase, E subunit;
n=5; Actinomycetales|Rep: NADH-quinone oxidoreductase, E
subunit - Frankia sp. (strain CcI3)
Length = 262
Score = 31.1 bits (67), Expect = 8.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 303 FSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQ 401
FS + ++A YP G R A++PLL L Q
Sbjct: 3 FSPETHAAAQEIIARYPAGRSRSALLPLLHLVQ 35
>UniRef50_A2Y357 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 739
Score = 31.1 bits (67), Expect = 8.7
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -1
Query: 161 FFDCIXICYKSYIAKHCSRTDSFCSQLQLKLHISLIXLC 45
F CI IC + +AKH +TD C Q +L+ S LC
Sbjct: 393 FCVCI-ICRRKKVAKHSGKTDKKCLTYQTELYKSPSNLC 430
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 380,254,522
Number of Sequences: 1657284
Number of extensions: 6789934
Number of successful extensions: 15576
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 15291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15575
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17773009086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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