Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30c06
         (404 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF519470-2|ABP73550.1|  177|Anopheles gambiae CTL4 protein.            23   4.2  

>EF519470-2|ABP73550.1|  177|Anopheles gambiae CTL4 protein.
          Length = 177

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = -1

Query: 230 CGXN*PRGYTPQALYSSPEAG*HFFDCIXICYKSYIAKHCSRTDSFCSQLQLKL 69
           C    PRG     LY++P    ++FD +  C    ++    +  + C  LQL L
Sbjct: 41  CPCGNPRG---GKLYTTPNLRLNWFDAVSYCSSIGMSIATIKDTNECQLLQLHL 91


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,312
Number of Sequences: 2352
Number of extensions: 7855
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)