Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30c06
         (404 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M22538-1|AAA75390.1|  249|Homo sapiens NADH-ubiquinone reductase...    81   2e-15
D88548-1|BAA25988.1|  231|Homo sapiens 24-kDa subunit of complex...    81   2e-15
CR456928-1|CAG33209.1|  249|Homo sapiens NDUFV2 protein.               81   2e-15
BC071689-1|AAH71689.1|  249|Homo sapiens NADH dehydrogenase (ubi...    81   2e-15
BC017487-1|AAH17487.1|  249|Homo sapiens NADH dehydrogenase (ubi...    81   2e-15
BC001632-1|AAH01632.1|  249|Homo sapiens NADH dehydrogenase (ubi...    81   2e-15
AK001683-1|BAA91834.1|  738|Homo sapiens protein ( Homo sapiens ...    29   5.9  
AJ252275-1|CAC20421.1|  117|Homo sapiens immunoglobulin anti-gp9...    29   5.9  
AB007859-1|BAA23695.4| 2982|Homo sapiens KIAA0399 protein protein.     29   5.9  

>M22538-1|AAA75390.1|  249|Homo sapiens NADH-ubiquinone reductase
           protein.
          Length = 249

 Score = 80.6 bits (190), Expect = 2e-15
 Identities = 33/52 (63%), Positives = 43/52 (82%)
 Frame = +3

Query: 249 SLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
           +LFVHRDTPE+NP  PF+F+  N KR+EA++  YPEGHK  A++P+LDLAQR
Sbjct: 37  ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQR 88


>D88548-1|BAA25988.1|  231|Homo sapiens 24-kDa subunit of complex I
           protein.
          Length = 231

 Score = 80.6 bits (190), Expect = 2e-15
 Identities = 33/52 (63%), Positives = 43/52 (82%)
 Frame = +3

Query: 249 SLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
           +LFVHRDTPE+NP  PF+F+  N KR+EA++  YPEGHK  A++P+LDLAQR
Sbjct: 19  ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQR 70


>CR456928-1|CAG33209.1|  249|Homo sapiens NDUFV2 protein.
          Length = 249

 Score = 80.6 bits (190), Expect = 2e-15
 Identities = 33/52 (63%), Positives = 43/52 (82%)
 Frame = +3

Query: 249 SLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
           +LFVHRDTPE+NP  PF+F+  N KR+EA++  YPEGHK  A++P+LDLAQR
Sbjct: 37  ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQR 88


>BC071689-1|AAH71689.1|  249|Homo sapiens NADH dehydrogenase
           (ubiquinone) flavoprotein 2, 24kDa protein.
          Length = 249

 Score = 80.6 bits (190), Expect = 2e-15
 Identities = 33/52 (63%), Positives = 43/52 (82%)
 Frame = +3

Query: 249 SLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
           +LFVHRDTPE+NP  PF+F+  N KR+EA++  YPEGHK  A++P+LDLAQR
Sbjct: 37  ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQR 88


>BC017487-1|AAH17487.1|  249|Homo sapiens NADH dehydrogenase
           (ubiquinone) flavoprotein 2, 24kDa protein.
          Length = 249

 Score = 80.6 bits (190), Expect = 2e-15
 Identities = 33/52 (63%), Positives = 43/52 (82%)
 Frame = +3

Query: 249 SLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
           +LFVHRDTPE+NP  PF+F+  N KR+EA++  YPEGHK  A++P+LDLAQR
Sbjct: 37  ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQR 88


>BC001632-1|AAH01632.1|  249|Homo sapiens NADH dehydrogenase
           (ubiquinone) flavoprotein 2, 24kDa protein.
          Length = 249

 Score = 80.6 bits (190), Expect = 2e-15
 Identities = 33/52 (63%), Positives = 43/52 (82%)
 Frame = +3

Query: 249 SLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQR 404
           +LFVHRDTPE+NP  PF+F+  N KR+EA++  YPEGHK  A++P+LDLAQR
Sbjct: 37  ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQR 88


>AK001683-1|BAA91834.1|  738|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10821 fis, clone NT2RP4001057. ).
          Length = 738

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +3

Query: 285 PSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDL 395
           PS    F++ +QKR+  LLA      K G  +PL+DL
Sbjct: 389 PSPEQVFAECSQKRILGLLAAMLPPLKSGPTVPLIDL 425


>AJ252275-1|CAC20421.1|  117|Homo sapiens immunoglobulin
           anti-gp96/grp94 variable region oflta protein.
          Length = 117

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
 Frame = -3

Query: 120 ETLFANRF---VLLT--TSAQTSYLTHXTVRSKTSTYXYCQYIP 4
           ET++A +F   V +T  TS  T+Y+   ++RS+ +   YC  IP
Sbjct: 57  ETIYAEKFQGRVTITADTSTDTAYMELSSLRSEDTAVYYCARIP 100


>AB007859-1|BAA23695.4| 2982|Homo sapiens KIAA0399 protein protein.
          Length = 2982

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +3

Query: 285  PSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDL 395
            PS    F++ +QKR+  LLA      K G  +PL+DL
Sbjct: 2096 PSPEQVFAECSQKRILGLLAAMLPPLKSGPTVPLIDL 2132


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,363,734
Number of Sequences: 237096
Number of extensions: 1107027
Number of successful extensions: 2974
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2974
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2985693880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)