Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30c01
         (729 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0235 - 27068516-27069032,27069697-27069788,27070056-270702...    33   0.31 
04_04_0781 - 28034978-28036615                                         30   2.2  
08_02_1147 - 24688686-24689729,24689875-24690036,24690339-246903...    29   2.9  
07_01_1016 + 8641370-8641393,8642676-8643012,8643292-8643326           29   3.8  
09_04_0642 - 19174274-19174783                                         29   5.0  
05_05_0015 + 21530547-21531047                                         29   5.0  
02_04_0562 - 23886272-23886357,23886456-23886571,23887045-238871...    29   5.0  
11_04_0216 - 14954047-14956098                                         28   8.7  
01_06_1719 - 39416586-39416600,39418718-39418951,39420192-39420290     28   8.7  

>02_05_0235 -
           27068516-27069032,27069697-27069788,27070056-27070289,
           27071569-27071676,27071796-27071855,27072368-27072443,
           27072550-27072710,27076919-27076981,27077061-27077148,
           27077568-27078308,27078406-27079033,27079314-27079368,
           27082073-27083527
          Length = 1425

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = +2

Query: 209 FIQESSSATSRACF*DQVYRCQPKWGGCGMRQTLLERSRDVDGSLGSLVKA 361
           F + + +  +R  F + ++RC+ KW G GM  TL      VD  L +++KA
Sbjct: 190 FDRATEATLNRFIFPEYLWRCK-KWLGLGMETTLASSVAHVDQYLAAVIKA 239


>04_04_0781 - 28034978-28036615
          Length = 545

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = +2

Query: 209 FIQESSSATSRACF*DQVYRCQPKWGGCGMRQTLLERSRDVDGSLGSLVKA 361
           F + + +  +R  F + V+R + KW G GM  TL    + VD  L +++KA
Sbjct: 217 FDRATEATLNRFIFPECVWRFK-KWMGLGMETTLARSVQHVDRYLSAVIKA 266


>08_02_1147 -
           24688686-24689729,24689875-24690036,24690339-24690368,
           24690713-24690860,24691302-24691489
          Length = 523

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +1

Query: 646 EEQAKVEARKMVKLKKQRDAEIRKA 720
           EE+ K E RK+ +LKKQ+D E  KA
Sbjct: 26  EEKEKEEQRKIQELKKQQDEEREKA 50


>07_01_1016 + 8641370-8641393,8642676-8643012,8643292-8643326
          Length = 131

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 636 AQPRGASESGSTEDGQAEEAARRRNPKGPGR 728
           A   G    G  E+G+ EEAA  R P+G  R
Sbjct: 60  AAEAGGGGVGEAEEGEEEEAAETRGPRGCAR 90


>09_04_0642 - 19174274-19174783
          Length = 169

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 6/59 (10%)
 Frame = +3

Query: 183 EIQLHFW*CSSRSRHRPQAVHVFKTRFT------GASQNGVAVECGRHSWSEAATWMAA 341
           E+  H W C SR R    A H F T  T         +N       + +W+E A  MAA
Sbjct: 107 EVSFHLWLCDSRKRLTKAARHGFDTIATLIAWTIWKERNNRVFNQQQKTWAEVARAMAA 165


>05_05_0015 + 21530547-21531047
          Length = 166

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 11/21 (52%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
 Frame = +2

Query: 620 LRLSRSAAPR-SKRKWKHGRW 679
           LR++ +AAP+ S R+W+ GRW
Sbjct: 87  LRMAVAAAPKTSHRRWRQGRW 107


>02_04_0562 -
           23886272-23886357,23886456-23886571,23887045-23887127,
           23887683-23887829,23887946-23887993,23888166-23888384,
           23889370-23889541,23889636-23889700,23890386-23890512,
           23891358-23891450,23891520-23891629,23891722-23891868,
           23892161-23892473,23892580-23893178
          Length = 774

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +1

Query: 631 KKRSPEEQAKVEARKMVKLKKQRDAEIRKALAE 729
           KK+  EE+AK E  +  KLK+ + AE   AL E
Sbjct: 546 KKKEKEEKAKQEKEEKAKLKEPKAAEEDLALKE 578


>11_04_0216 - 14954047-14956098
          Length = 683

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/48 (25%), Positives = 25/48 (52%)
 Frame = +1

Query: 586 EDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAE 729
           E+  ++CDP+  +I K   P +     +R++++ + Q     +K L E
Sbjct: 263 EEKRLECDPVSVEIKKCEPPAKSLSSVSRRILQWEAQASGNFKKVLDE 310


>01_06_1719 - 39416586-39416600,39418718-39418951,39420192-39420290
          Length = 115

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 283 GWLWNAADTPGAKPRRGWQPGVIGKS 360
           GWLW A  TP  K ++ W  G  G+S
Sbjct: 84  GWLWLA--TPADKSQQAWGAGDFGRS 107


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,226,203
Number of Sequences: 37544
Number of extensions: 324997
Number of successful extensions: 1179
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1179
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)