Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30c01
(729 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z22178-3|CAA80159.3| 1027|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF192400-1|AAF24233.1| 1027|Caenorhabditis elegans emb-30 protei... 29 2.6
AF040659-1|AAK39389.1| 332|Caenorhabditis elegans Hypothetical ... 29 2.6
U80847-1|AAB37983.2| 738|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z82078-2|CAD54160.1| 714|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z82078-1|CAB04944.2| 707|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical p... 28 7.9
AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical ... 28 7.9
AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical
protein C17H1.9 protein.
Length = 353
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 535 FTIQVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEI 711
F + + LKD+ E++ N+D Y+ D K + ++K+E R +L+ R EI
Sbjct: 207 FNVILGLLKDMKELSENKDHYLPADLKKIKYTSDEIEKHKSKLEFRNQ-QLESSRTLEI 264
>Z22178-3|CAA80159.3| 1027|Caenorhabditis elegans Hypothetical
protein F54C8.3 protein.
Length = 1027
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 469 DSEPDEPLEPKPALKVQRKGDVFTIQVNPLKDLTEIAPNEDPYVDC 606
D EP+ EP+PA + R G F +++ + E+ P D DC
Sbjct: 640 DEEPEPEGEPQPACDLDRVGSFFEKELS--QKALEVLPKCDETFDC 683
>AF192400-1|AAF24233.1| 1027|Caenorhabditis elegans emb-30 protein
protein.
Length = 1027
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 469 DSEPDEPLEPKPALKVQRKGDVFTIQVNPLKDLTEIAPNEDPYVDC 606
D EP+ EP+PA + R G F +++ + E+ P D DC
Sbjct: 640 DEEPEPEGEPQPACDLDRVGSFFEKELS--QKALEVLPKCDETFDC 683
>AF040659-1|AAK39389.1| 332|Caenorhabditis elegans Hypothetical
protein ZK484.3 protein.
Length = 332
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1
Query: 610 PLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALA 726
P+ +I K P VE ++ + KK+RDAE RKALA
Sbjct: 80 PVKKEIKPKNKPAPVPVVEKKRTIPSKKERDAE-RKALA 117
>U80847-1|AAB37983.2| 738|Caenorhabditis elegans Hypothetical
protein C17H11.2 protein.
Length = 738
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 232 HKPCMFLRPGLPVPAKMGWL 291
+K C LRPG+PVP M L
Sbjct: 155 YKKCQMLRPGVPVPRPMSLL 174
>Z82078-2|CAD54160.1| 714|Caenorhabditis elegans Hypothetical
protein W09D6.1b protein.
Length = 714
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 538 TIQVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMV 681
T+ V + E++P +VD + V KII+KR P+ + V+ RK +
Sbjct: 498 TVPVGDVLRKFELSPKLQSHVDFE--VRKIIRKRQPKMRWAVDLRKCI 543
>Z82078-1|CAB04944.2| 707|Caenorhabditis elegans Hypothetical
protein W09D6.1a protein.
Length = 707
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 538 TIQVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMV 681
T+ V + E++P +VD + V KII+KR P+ + V+ RK +
Sbjct: 498 TVPVGDVLRKFELSPKLQSHVDFE--VRKIIRKRQPKMRWAVDLRKCI 543
>Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 472 SEPDEPLEPKPALKVQRKGDVFTIQVNPLKDLTEIAPNE 588
S P P +P P ++ Q K DV+ Q NP + + P +
Sbjct: 218 SMPQSPSQPNPLVRSQSKSDVYQTQ-NPYRQDSYSQPTQ 255
>Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 472 SEPDEPLEPKPALKVQRKGDVFTIQVNPLKDLTEIAPNE 588
S P P +P P ++ Q K DV+ Q NP + + P +
Sbjct: 218 SMPQSPSQPNPLVRSQSKSDVYQTQ-NPYRQDSYSQPTQ 255
>AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical
protein Y102A11A.2b protein.
Length = 753
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 580 PNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKKQR 699
PN+ ++ FK KK+ E +AK+EA+K + +K+R
Sbjct: 466 PNQFQEIERAQREFKNQKKQEEEIRAKLEAKKKAEQEKER 505
>AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical
protein Y102A11A.2a protein.
Length = 772
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 580 PNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKKQR 699
PN+ ++ FK KK+ E +AK+EA+K + +K+R
Sbjct: 466 PNQFQEIERAQREFKNQKKQEEEIRAKLEAKKKAEQEKER 505
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,045,168
Number of Sequences: 27780
Number of extensions: 268161
Number of successful extensions: 792
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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