Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30b24
         (497 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069303-1|AAL39448.1|  408|Drosophila melanogaster HL07928p pro...    29   4.6  
AE014297-4281|AAF56828.1|  671|Drosophila melanogaster CG14523-P...    29   4.6  

>AY069303-1|AAL39448.1|  408|Drosophila melanogaster HL07928p
           protein.
          Length = 408

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
 Frame = -3

Query: 117 YITRVHYCIVEL--HEL-NFVFNFCLQYFIFSKKSNIVDSCI 1
           Y+ ++   + E   H L N+VFN  L++F + +  ++V+ C+
Sbjct: 51  YLMKIDELVTETPPHVLANYVFNELLKHFYYERAESVVEQCV 92


>AE014297-4281|AAF56828.1|  671|Drosophila melanogaster CG14523-PA
           protein.
          Length = 671

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
 Frame = -3

Query: 117 YITRVHYCIVEL--HEL-NFVFNFCLQYFIFSKKSNIVDSCI 1
           Y+ ++   + E   H L N+VFN  L++F + +  ++V+ C+
Sbjct: 314 YLMKIDELVTETPPHVLANYVFNELLKHFYYERAESVVEQCV 355


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,088,257
Number of Sequences: 53049
Number of extensions: 327854
Number of successful extensions: 632
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)