Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30b24
         (497 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   4.1  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   4.1  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   4.1  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   5.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   5.4  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    21   7.1  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              21   7.1  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    21   7.1  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = -1

Query: 371 LRSSNKISYTYSSEIYLACMFRSNKL 294
           L S ++ S TY+++I+ A  ++ N+L
Sbjct: 72  LDSIDENSMTYAADIFFAQTWKDNRL 97


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 8   LSTIFDFLLKIKYCRQKLN 64
           + T  DFL    YCR +LN
Sbjct: 103 MRTYEDFLSVAVYCRDRLN 121


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 275 PVQCRCKVCLNET 313
           P+ C CK C ++T
Sbjct: 432 PIGCECKTCNSKT 444


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 85  FYNTIMYSGNV 117
           FY+TIMYS  V
Sbjct: 297 FYSTIMYSNGV 307


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 85  FYNTIMYSGNV 117
           FY+TIMYS  V
Sbjct: 297 FYSTIMYSNGV 307


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 215 RPDCWYKRIPKI 250
           RPDC++K   K+
Sbjct: 89  RPDCFFKNAKKV 100


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 266 LRGPVQCRCKVC 301
           +R PV+C+C  C
Sbjct: 129 IREPVECKCIKC 140


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 266 LRGPVQCRCKVC 301
           +R PV+C+C  C
Sbjct: 129 IREPVECKCIKC 140


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,610
Number of Sequences: 438
Number of extensions: 2193
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)