BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30b20
(793 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 25 2.0
AY344822-1|AAR02433.1| 257|Anopheles gambiae CP5039 protein. 23 8.2
AY344821-1|AAR02432.1| 257|Anopheles gambiae CP5039 protein. 23 8.2
AY344820-1|AAR02431.1| 257|Anopheles gambiae CP5039 protein. 23 8.2
AY344819-1|AAR02430.1| 257|Anopheles gambiae CP5039 protein. 23 8.2
AY344818-1|AAR02429.1| 257|Anopheles gambiae CP5039 protein. 23 8.2
AY344817-1|AAR02428.1| 257|Anopheles gambiae CP5039 protein. 23 8.2
AY344816-1|AAR02427.1| 257|Anopheles gambiae CP5039 protein. 23 8.2
AY344815-1|AAR02426.1| 257|Anopheles gambiae CP5039 protein. 23 8.2
>AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein
protein.
Length = 492
Score = 25.4 bits (53), Expect = 2.0
Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = +2
Query: 209 TSRFEK-CKGPRRRDCSDVK 265
T F + CKGP R DC VK
Sbjct: 424 TGHFSRDCKGPDRTDCDAVK 443
>AY344822-1|AAR02433.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.4 bits (48), Expect = 8.2
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1
Query: 532 LRKLDFSYNL 561
LRKLD+SYNL
Sbjct: 160 LRKLDYSYNL 169
>AY344821-1|AAR02432.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.4 bits (48), Expect = 8.2
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1
Query: 532 LRKLDFSYNL 561
LRKLD+SYNL
Sbjct: 160 LRKLDYSYNL 169
>AY344820-1|AAR02431.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.4 bits (48), Expect = 8.2
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1
Query: 532 LRKLDFSYNL 561
LRKLD+SYNL
Sbjct: 160 LRKLDYSYNL 169
>AY344819-1|AAR02430.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.4 bits (48), Expect = 8.2
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1
Query: 532 LRKLDFSYNL 561
LRKLD+SYNL
Sbjct: 160 LRKLDYSYNL 169
>AY344818-1|AAR02429.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.4 bits (48), Expect = 8.2
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1
Query: 532 LRKLDFSYNL 561
LRKLD+SYNL
Sbjct: 160 LRKLDYSYNL 169
>AY344817-1|AAR02428.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.4 bits (48), Expect = 8.2
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1
Query: 532 LRKLDFSYNL 561
LRKLD+SYNL
Sbjct: 160 LRKLDYSYNL 169
>AY344816-1|AAR02427.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.4 bits (48), Expect = 8.2
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1
Query: 532 LRKLDFSYNL 561
LRKLD+SYNL
Sbjct: 160 LRKLDYSYNL 169
>AY344815-1|AAR02426.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.4 bits (48), Expect = 8.2
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1
Query: 532 LRKLDFSYNL 561
LRKLD+SYNL
Sbjct: 160 LRKLDYSYNL 169
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 769,568
Number of Sequences: 2352
Number of extensions: 16109
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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