Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30b18
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical p... 33 0.26
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 32 0.46
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 1.4
Z75545-2|CAA99885.1| 327|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81589-2|CAB04724.1| 728|Caenorhabditis elegans Hypothetical pr... 28 5.7
AF039053-9|AAN84838.1| 131|Caenorhabditis elegans Hypothetical ... 28 5.7
AF039053-8|AAC25878.1| 178|Caenorhabditis elegans Hypothetical ... 28 5.7
Z75547-14|CAA99901.2| 461|Caenorhabditis elegans Hypothetical p... 28 7.5
Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z66512-8|CAA91324.2| 349|Caenorhabditis elegans Hypothetical pr... 28 7.5
U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel... 28 7.5
U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel... 28 7.5
U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel... 28 7.5
AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltag... 28 7.5
AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calciu... 28 7.5
AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calciu... 28 7.5
AL023835-13|CAA19497.4| 304|Caenorhabditis elegans Hypothetical... 28 7.5
AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-depen... 28 7.5
Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical pr... 27 9.9
>U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical
protein C34D4.1 protein.
Length = 512
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 595 RQWLARKEQEKREKARLEKQKQHTIPATTPEQREAS 702
++WL +KE+E REK EK AT E+RE S
Sbjct: 267 KEWLQKKEREIREKKAKEKAAAEQKAATEKERRENS 302
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 551 KKSENVTRKRNRKLFVSGWRARSKKNAKRRVWKNKNNTLSLQPHPN 688
KKS+ + +K+N+K ++ S+KN K + K K+ + S P PN
Sbjct: 213 KKSKKIKKKKNKKS-KDKKKSNSRKNKKNKKSKGKSTSTSEPPTPN 257
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +2
Query: 545 LQKKSENVTRKRNRKLFVSGWRARSKKNAKRRVWKNKNNTLSLQP 679
L+ KS+ + R KL + WR ++++N ++ WK K++ S+ P
Sbjct: 899 LEMKSQ-LLRIEREKLMQTSWRQQTQENEEKETWK-KDSRASISP 941
>Z75545-2|CAA99885.1| 327|Caenorhabditis elegans Hypothetical
protein K10D3.3 protein.
Length = 327
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +1
Query: 610 RKEQEKREKARLEKQKQHTIPATTPE 687
R+E+++R++ R EK+K++ + A +PE
Sbjct: 171 REEEQRRKRLREEKEKENAMRAASPE 196
>Z81589-2|CAB04724.1| 728|Caenorhabditis elegans Hypothetical
protein T08G5.2 protein.
Length = 728
Score = 28.3 bits (60), Expect = 5.7
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 440 FKFI*MKTHLVTIVLIVKMGLTLFDYPWHLFLRPQLQKKSENVTR-KRNRKLFVSGWRAR 616
FKF + H I L + + + + H RPQ+Q + E + + R R + AR
Sbjct: 257 FKFSTAELHFKNIFLKIPVDKSAWQISLHNPERPQIQMEFEIIFKHARFRNVKYRAIFAR 316
Query: 617 SKKNAKRR 640
SK+N RR
Sbjct: 317 SKENEDRR 324
>AF039053-9|AAN84838.1| 131|Caenorhabditis elegans Hypothetical
protein C45H4.14b protein.
Length = 131
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 583 QEAFRQWLARKEQEKREKARLEKQKQHTIPATTPEQRE 696
QE Q KEQ K+EKA L+K+ + + E+R+
Sbjct: 35 QERQAQKKGAKEQAKKEKAELKKEAKELLKKEKAEERK 72
>AF039053-8|AAC25878.1| 178|Caenorhabditis elegans Hypothetical
protein C45H4.14a protein.
Length = 178
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 583 QEAFRQWLARKEQEKREKARLEKQKQHTIPATTPEQRE 696
QE Q KEQ K+EKA L+K+ + + E+R+
Sbjct: 82 QERQAQKKGAKEQAKKEKAELKKEAKELLKKEKAEERK 119
>Z75547-14|CAA99901.2| 461|Caenorhabditis elegans Hypothetical
protein R11D1.7 protein.
Length = 461
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -2
Query: 323 VTSSTQEPVCSDVTECVASIFST*MAGLMYLVLLFLDATES 201
+ T E V S + C+ +F+T ++YL +L L A ES
Sbjct: 60 IDKQTDEQVASHM--CLFEVFATLFVNIIYLSMLHLSAVES 98
>Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical
protein C11H1.3 protein.
Length = 529
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 130 DCELKRYNHVFDEAGENTHYHSDSDSVASRKSKTR 234
DCE K+ D+ ++ HSD DSV + + R
Sbjct: 469 DCESKKSEESEDDERKSQAAHSDDDSVTANEDSAR 503
>Z66512-8|CAA91324.2| 349|Caenorhabditis elegans Hypothetical
protein F52H3.4 protein.
Length = 349
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/67 (23%), Positives = 24/67 (35%)
Frame = +1
Query: 163 DEAGENTHYHSDSDSVASRKSKTRYINPAIYVEKIEATHSVTSLQTGSCVDDVTPHPHSD 342
+ A EN+ D SV K+ TR+I P I + C D + +
Sbjct: 69 ENADENSKNKEDPQSVVKEKTTTRFIKPKSEYVSISSDSESEEDSDSECSDSDSVNEFFA 128
Query: 343 YRSNSTP 363
Y+ P
Sbjct: 129 YKPPEAP 135
>U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform a protein.
Length = 1837
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 583 QEAFRQWLARKEQEKREKARLEKQKQHTIPATTPEQREASY 705
+EA + + KE+EKR K +L++QK A ++ E +Y
Sbjct: 1381 KEALEKEMREKEKEKRLKRKLKRQKFEESMAGKRKKMERNY 1421
>U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform d protein.
Length = 1885
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 583 QEAFRQWLARKEQEKREKARLEKQKQHTIPATTPEQREASY 705
+EA + + KE+EKR K +L++QK A ++ E +Y
Sbjct: 1429 KEALEKEMREKEKEKRLKRKLKRQKFEESMAGKRKKMERNY 1469
>U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform e protein.
Length = 1844
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 583 QEAFRQWLARKEQEKREKARLEKQKQHTIPATTPEQREASY 705
+EA + + KE+EKR K +L++QK A ++ E +Y
Sbjct: 1388 KEALEKEMREKEKEKRLKRKLKRQKFEESMAGKRKKMERNY 1428
>AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltage
sensitive calciumchannel alpha1 subunit isoform D
protein.
Length = 1844
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 583 QEAFRQWLARKEQEKREKARLEKQKQHTIPATTPEQREASY 705
+EA + + KE+EKR K +L++QK A ++ E +Y
Sbjct: 1388 KEALEKEMREKEKEKRLKRKLKRQKFEESMAGKRKKMERNY 1428
>AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform B protein.
Length = 1885
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 583 QEAFRQWLARKEQEKREKARLEKQKQHTIPATTPEQREASY 705
+EA + + KE+EKR K +L++QK A ++ E +Y
Sbjct: 1429 KEALEKEMREKEKEKRLKRKLKRQKFEESMAGKRKKMERNY 1469
>AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform A protein.
Length = 1837
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 583 QEAFRQWLARKEQEKREKARLEKQKQHTIPATTPEQREASY 705
+EA + + KE+EKR K +L++QK A ++ E +Y
Sbjct: 1381 KEALEKEMREKEKEKRLKRKLKRQKFEESMAGKRKKMERNY 1421
>AL023835-13|CAA19497.4| 304|Caenorhabditis elegans Hypothetical
protein Y37A1B.15 protein.
Length = 304
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -3
Query: 397 LKIHSNPVHLRMGSNYSCNRCVGAE*RHQHKNPSAVTSLNALLQSFQRKW 248
LKI SN + G N CN C+ AE H + + L ++F RKW
Sbjct: 29 LKIWSNTEIVLAGGNVICNLCI-AEKSHAVQFDRKY-MIKTLSKTFSRKW 76
>AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-dependent
calcium channelalpha13 subunit protein.
Length = 1837
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 583 QEAFRQWLARKEQEKREKARLEKQKQHTIPATTPEQREASY 705
+EA + + KE+EKR K +L++QK A ++ E +Y
Sbjct: 1381 KEALEKEMREKEKEKRLKRKLKRQKFEESMAGKRKKMERNY 1421
>Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical
protein C49C3.4 protein.
Length = 1566
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 316 HQHKNPSAVTSLNALLQSFQRKW 248
H NP+A +LN++ SF R W
Sbjct: 411 HVESNPTAQITLNSISASFDRSW 433
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.131 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,103,281
Number of Sequences: 27780
Number of extensions: 327571
Number of successful extensions: 1142
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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