Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30b15
(731 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0910 - 22519006-22519159,22519300-22519355,22519433-225197... 141 6e-34
06_03_0723 + 23875008-23875204,23875311-23875576,23877166-238772... 125 4e-29
01_07_0189 + 41875088-41875149,41875322-41875392,41875809-418759... 115 3e-26
02_01_0739 + 5505630-5505654,5505965-5506049,5506444-5506519,550... 108 5e-24
10_08_1021 - 22315487-22315493,22317051-22317154,22317227-223173... 100 1e-21
03_06_0726 - 35761959-35762063,35762232-35762336,35762543-357626... 97 2e-20
09_04_0694 - 19529084-19529201,19529464-19529544,19529637-195301... 94 1e-19
03_02_0554 - 9426195-9426674,9427163-9427252,9428143-9428934 87 2e-17
02_05_0042 + 25351648-25351724,25351983-25352010,25352311-253523... 85 7e-17
01_06_1112 + 34606171-34606266,34607170-34607231,34607932-346080... 81 9e-16
03_02_0844 + 11695159-11695263,11695402-11695463,11695789-116958... 75 6e-14
08_02_1409 - 26864544-26864658,26864787-26864916,26864953-268652... 72 5e-13
05_06_0203 + 26348360-26348458,26349584-26349645,26349808-263498... 67 2e-11
02_05_0566 - 30017031-30017309,30018077-30018172,30018261-300183... 49 3e-06
03_01_0336 - 2659349-2659486,2659607-2659758,2660257-2660365,266... 33 0.23
05_04_0135 + 18322962-18323136,18323182-18323237,18323749-183238... 32 0.54
12_02_0800 + 23299674-23299678,23299714-23299791,23299876-232999... 30 1.6
01_06_0924 - 33058194-33058697,33058798-33060147,33060234-330603... 29 2.9
06_03_1303 + 29180837-29181205,29181289-29181306,29181337-291816... 29 3.8
11_06_0261 - 21765167-21765373,21765828-21766097,21767330-217673... 29 5.0
11_04_0417 - 17438023-17438331,17438706-17438795 29 5.0
12_02_0349 - 17820352-17821238,17822976-17823363 28 6.6
11_06_0195 - 21138029-21138389,21139796-21140052 28 6.6
07_03_1489 + 26933029-26933077,26933704-26933838,26934354-269344... 28 6.6
06_03_1507 - 30646168-30646254,30646350-30646490,30648109-306482... 28 6.6
02_01_0117 - 866336-866890,867484-869010 28 6.6
12_02_0090 + 13493311-13494180 28 8.8
10_06_0053 - 10110617-10111271,10112023-10112417,10112565-101126... 28 8.8
>07_03_0910 -
22519006-22519159,22519300-22519355,22519433-22519702,
22519808-22519986,22520146-22520374,22520985-22521180,
22521728-22521818,22521921-22521975,22522812-22522902,
22523366-22523424,22524000-22524050
Length = 476
Score = 141 bits (341), Expect = 6e-34
Identities = 61/122 (50%), Positives = 91/122 (74%)
Frame = +2
Query: 119 AKQIQDRCQNILVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISK 298
+K++ + + IL +L+ +N+ C DC +KGPRWAS NLGIF+C++C+GIHR+LGVHISK
Sbjct: 8 SKELNAKHKKILEGLLRLPENRECADCKSKGPRWASVNLGIFICMQCSGIHRSLGVHISK 67
Query: 299 VKSVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYEQKKYI 478
V+S LD+W PEQV +Q MGN ++ + +EA LP ++ R + +E+FIRAKYE K++I
Sbjct: 68 VRSATLDTWLPEQVAFIQSMGNEKSNSYWEAELPPNYDR----VGIENFIRAKYEDKRWI 123
Query: 479 AK 484
+
Sbjct: 124 PR 125
>06_03_0723 + 23875008-23875204,23875311-23875576,23877166-23877274,
23877577-23878212,23878328-23878573,23878669-23878834,
23878863-23879076,23879580-23880097,23880617-23880683,
23882131-23882215,23882292-23882367,23882593-23882756,
23883088-23883217,23883314-23883430,23883505-23883600,
23883732-23884009,23886571-23886794,23886935-23887011,
23887103-23887145,23887231-23887288,23888371-23888410,
23888891-23889418
Length = 1444
Score = 125 bits (301), Expect = 4e-29
Identities = 59/136 (43%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Frame = +2
Query: 152 LVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVKSVNLDSWTP 331
L ++L +N+ C DC + P+WAS N+G+F+C++C+GIHR+LG HISKV SV LD WT
Sbjct: 812 LKELLHKSENRICADCSSPDPKWASANIGVFICLKCSGIHRSLGTHISKVLSVTLDEWTD 871
Query: 332 EQVVSLQQM-GNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYEQKKYIAKEWVPPQLP 508
+++ S+ ++ GNS A A+YEA LP + +P D S E RA + + KY +E++ P L
Sbjct: 872 DEINSMLEVGGNSYANAIYEAFLPGGYHKPHPDSSQEE--RADFIRSKYELQEFLKPSLR 929
Query: 509 KVNWDKEIDEEMDRQK 556
V+ +K + MD +K
Sbjct: 930 IVS-NKSSLQAMDSRK 944
>01_07_0189 +
41875088-41875149,41875322-41875392,41875809-41875902,
41876285-41876360,41877130-41877293,41877428-41877605,
41877687-41877809,41877895-41877990,41878091-41878372
Length = 381
Score = 115 bits (277), Expect = 3e-26
Identities = 51/114 (44%), Positives = 73/114 (64%), Gaps = 4/114 (3%)
Frame = +2
Query: 152 LVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVKSVNLDSWTP 331
L +L NK C DC A P+W S G+F+CI+C+G HR+LGVHISKV SV LD WT
Sbjct: 53 LEHLLNQPANKICADCGAPDPKWVSLTFGVFICIKCSGAHRSLGVHISKVVSVKLDEWTD 112
Query: 332 EQV-VSLQQMGNSRARAVYEANLPDSFRRPQNDMSLE---SFIRAKYEQKKYIA 481
EQV + GN+ +YEA +P+++ +P+ D S E F+R KYE +++++
Sbjct: 113 EQVDILADSGGNAAVNMIYEAFIPENYMKPRQDCSSEGRNDFVRRKYELQQFLS 166
>02_01_0739 +
5505630-5505654,5505965-5506049,5506444-5506519,
5506694-5506857,5506878-5506935,5507283-5507399,
5507543-5507638,5507905-5508186
Length = 300
Score = 108 bits (259), Expect = 5e-24
Identities = 46/116 (39%), Positives = 75/116 (64%), Gaps = 1/116 (0%)
Frame = +2
Query: 152 LVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVKSVNLDSWTP 331
L ++L +N+ C DC A P+WAS N+G+F+C++C+G+HR+LG HISKV SV LD W+
Sbjct: 14 LKELLHRSENRICADCSAPDPKWASANIGVFICLKCSGVHRSLGTHISKVLSVTLDQWSD 73
Query: 332 EQVVSLQQM-GNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYEQKKYIAKEWVP 496
++ ++ ++ GNS A A+YE LP + +P D + E R K+ ++ + +P
Sbjct: 74 NEIDNVIEVGGNSHANAIYETFLPQNHSKPHPDSTQEE--REKFISSQHFQVQGMP 127
>10_08_1021 -
22315487-22315493,22317051-22317154,22317227-22317328,
22317623-22317745,22318038-22318094,22318498-22318758,
22318948-22319377,22320168-22320286,22320515-22320595
Length = 427
Score = 100 bits (240), Expect = 1e-21
Identities = 41/71 (57%), Positives = 54/71 (76%)
Frame = +2
Query: 176 DNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVKSVNLDSWTPEQVVSLQQ 355
DNK C DC+AK P WAS G+FLCI C+ +HR+LGVH+S V+S NLDSWTPEQ+ +
Sbjct: 25 DNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLDSWTPEQLKMMVY 84
Query: 356 MGNSRARAVYE 388
GN+RA+A ++
Sbjct: 85 GGNNRAQAFFK 95
>03_06_0726 -
35761959-35762063,35762232-35762336,35762543-35762665,
35763056-35763316,35763449-35763905,35764637-35764755,
35764851-35764919
Length = 412
Score = 96.7 bits (230), Expect = 2e-20
Identities = 42/83 (50%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Frame = +2
Query: 143 QNILVQMLKDE-DNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVKSVNLD 319
+N + + LK + +NK C DC AK P WAS GIFLC+ C+ +HR+LGVHI+ V+S NLD
Sbjct: 9 KNAVFRRLKAKPENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLD 68
Query: 320 SWTPEQVVSLQQMGNSRARAVYE 388
SWTP+Q+ + GN+RA A ++
Sbjct: 69 SWTPDQLKMMAFGGNNRAHAFFK 91
>09_04_0694 -
19529084-19529201,19529464-19529544,19529637-19530136,
19530444-19530540,19530633-19530775,19531187-19531528,
19531810-19532031,19532292-19532330,19532386-19532601,
19533101-19533196,19533416-19533481,19533777-19533821,
19533903-19533965,19534274-19534344,19534599-19534699,
19534896-19534972,19535856-19535900
Length = 773
Score = 93.9 bits (223), Expect = 1e-19
Identities = 44/87 (50%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Frame = +2
Query: 179 NKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVKSVNLD--SWTPEQVVSLQ 352
N C DC A P WAS NLGI LCI C+G+HRNLGVHISKV+S+ LD W P + Q
Sbjct: 422 NNICADCGAAEPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVRVWEPSVINLFQ 481
Query: 353 QMGNSRARAVYEANLPDSFRRPQNDMS 433
+GN+ A ++E LP S D S
Sbjct: 482 SLGNTFANTIWEDMLPSSSSVDHGDNS 508
>03_02_0554 - 9426195-9426674,9427163-9427252,9428143-9428934
Length = 453
Score = 86.6 bits (205), Expect = 2e-17
Identities = 36/71 (50%), Positives = 48/71 (67%)
Frame = +2
Query: 179 NKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVKSVNLDSWTPEQVVSLQQM 358
NK CVDC + P+WAS + G+F+C+ C+G HR LGVHIS V+SV +DSWT Q+ ++
Sbjct: 18 NKTCVDCAQRNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWTEAQLRKMEAG 77
Query: 359 GNSRARAVYEA 391
GN R A A
Sbjct: 78 GNDRLNAFLAA 88
>02_05_0042 +
25351648-25351724,25351983-25352010,25352311-25352373,
25352880-25352945,25353029-25353076,25353338-25353379,
25353499-25353714,25354066-25354188,25354352-25354564,
25354930-25355016,25355259-25355507,25356386-25356507,
25357135-25357225,25358467-25358882,25359489-25359609
Length = 653
Score = 84.6 bits (200), Expect = 7e-17
Identities = 48/115 (41%), Positives = 65/115 (56%), Gaps = 13/115 (11%)
Frame = +2
Query: 179 NKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVKSVNLD--SWTPEQVVSLQ 352
N C +C + P WAS NLGI +CI C+G HRNLGVHISKV+S+ LD W P +
Sbjct: 365 NDSCAECRSPDPDWASLNLGILICIECSGAHRNLGVHISKVRSLRLDVKVWEPVIMDLFH 424
Query: 353 QMGNSRARAVYEANLP--DSFRRPQNDMSL--------ESF-IRAKYEQKKYIAK 484
++GN +++EA LP D ND L ++F I+ +Y Q KY+ K
Sbjct: 425 ELGNDYTNSIWEAMLPKEDQGINEFNDAILFIEKPKPTDAFSIKERYIQTKYVDK 479
>01_06_1112 +
34606171-34606266,34607170-34607231,34607932-34608019,
34608104-34608165,34608246-34608342,34608499-34608930,
34609042-34610061,34610151-34610282,34610354-34610470,
34610982-34611062,34611321-34611447,34611547-34611592,
34611663-34611708
Length = 801
Score = 81.0 bits (191), Expect = 9e-16
Identities = 43/122 (35%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Frame = +2
Query: 119 AKQIQDRCQNILVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISK 298
+++ ++R + I+ ++K N+ C++C++ GP++ N F+C+ C+GIHR H +
Sbjct: 3 SRREEERNEKIIRGLMKLPPNRKCINCNSVGPQYVCTNFWTFICLSCSGIHREF-TH--R 59
Query: 299 VKSVNLDSWTPEQVVSLQQMGNSRARAVYEANLP-DSFRRPQNDM--SLESFIRAKYEQK 469
VKSV++ +T ++V SL+Q GN RAR +Y + R P N + FIRA Y K
Sbjct: 60 VKSVSMAKFTTQEVRSLEQGGNQRARDIYLKDWDWQRMRLPDNSNPDRIREFIRAVYVDK 119
Query: 470 KY 475
KY
Sbjct: 120 KY 121
>03_02_0844 +
11695159-11695263,11695402-11695463,11695789-11695876,
11695958-11696019,11696250-11696346,11696592-11696984,
11697072-11697611,11697856-11697966,11698102-11698242,
11698290-11698394,11698480-11698557,11699346-11699472,
11699580-11699625,11699709-11699754
Length = 666
Score = 74.9 bits (176), Expect = 6e-14
Identities = 50/169 (29%), Positives = 93/169 (55%), Gaps = 9/169 (5%)
Frame = +2
Query: 119 AKQIQDRCQNILVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISK 298
+++ ++R + ++ +LK N+ C++C+ GP++ + F+CI C+GIHR H +
Sbjct: 6 SRKEEERNERVVRGLLKLPPNRRCINCNGLGPQYVCTSFWTFVCISCSGIHREF-TH--R 62
Query: 299 VKSVNLDSWTPEQVVSLQQMGNSRARAVY-------EANLPDSFRRPQNDMSLESFIRAK 457
VKSV++ ++T ++V +LQ GN RAR + + LPDS N SL FI+A
Sbjct: 63 VKSVSMSTFTTQEVEALQNGGNQRARESFLKEFDAQKMRLPDS----SNVDSLREFIKAV 118
Query: 458 YEQKKYIAKEWV--PPQLPKVNWDKEIDEEMDRQKRKKKSATSSLGPLP 598
Y +++Y + PP+ DK+ +++ + Q+ ++ S+ S P
Sbjct: 119 YVERRYAGGRFSERPPR------DKQ-NQKNNEQEHRRASSYHSFSQSP 160
>08_02_1409 -
26864544-26864658,26864787-26864916,26864953-26865283,
26866507-26866626,26867489-26867821,26867915-26868001,
26868093-26868320,26868434-26868565,26868649-26868861,
26869376-26869417,26869829-26869894,26870230-26870274,
26870367-26870429,26870757-26870827,26871149-26871249,
26871458-26871534,26872415-26872459
Length = 732
Score = 71.7 bits (168), Expect = 5e-13
Identities = 46/120 (38%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Frame = +2
Query: 167 KDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVKSVNLDSWTPEQVVS 346
K + N CVDC + P WAS NLG LCI C+G+HRNLGVHISK+ S L S
Sbjct: 458 KVDGNIICVDCGSMEPDWASLNLGALLCIECSGVHRNLGVHISKLISTTL-------FRS 510
Query: 347 LQQMGNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYEQKKYIAKEWVPP-QLPKVNWD 523
+ + V + D F + E FI AKY K+++ K + QL + WD
Sbjct: 511 AHGLDTAWHFTVSKPKHSDPF------SAKEKFIHAKYADKEFVRKYSMDEIQLAQQMWD 564
>05_06_0203 +
26348360-26348458,26349584-26349645,26349808-26349895,
26349985-26350085,26350130-26350223,26350323-26350730,
26351090-26351521,26351612-26351755,26351824-26351940,
26352842-26352949
Length = 550
Score = 66.9 bits (156), Expect = 2e-11
Identities = 39/139 (28%), Positives = 75/139 (53%), Gaps = 16/139 (11%)
Frame = +2
Query: 116 RAKQIQDRCQNILVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHIS 295
R K+ ++R + + +LK N+ C++C++ GP++ + F+C+ C+GIHR H
Sbjct: 4 RVKE-EERNERAIRALLKLPGNRRCINCNSLGPQYVCTSFSTFVCVSCSGIHREF-TH-- 59
Query: 296 KVKSVNLDSWTPEQVVSLQQMGNSRARAVY---------------EANLPDSFRRPQNDM 430
+VKS+++ +T ++V +LQ+ GN R + +Y A PD + R D+
Sbjct: 60 RVKSISMAKFTSQEVSALQEGGNERGKEIYLKHWDFQGQPLPDIRSATKPDDYHRLLIDV 119
Query: 431 S-LESFIRAKYEQKKYIAK 484
L +FI+ Y +++ A+
Sbjct: 120 DRLRNFIKIVYVDRRFTAE 138
>02_05_0566 -
30017031-30017309,30018077-30018172,30018261-30018377,
30018538-30018667,30018866-30019029,30019480-30019485
Length = 263
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Frame = +2
Query: 299 VKSVNLDSWTPEQVVSLQQMG-NSRARAVYEANLPDSFRRPQNDMSLE---SFIRAKYEQ 466
V SV LD W+ + S+ ++G NS A ++YE+ LP +P+ D ++E FIRAKYE
Sbjct: 3 VLSVTLDDWSDSDIDSMLEIGGNSYANSIYESFLPKDHPKPKMDSTMEYRTKFIRAKYET 62
Query: 467 KKYI 478
+ ++
Sbjct: 63 QDFL 66
>03_01_0336 -
2659349-2659486,2659607-2659758,2660257-2660365,
2660459-2660563,2660874-2660957,2661072-2662745
Length = 753
Score = 33.1 bits (72), Expect = 0.23
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 325 DSRASGVATANGKQPRPGRVRGELTRLVQTS--TKRHVLGIVHTRQIRTEEIHCEGVGAP 498
D + T K G G+ +R V S T+ HV + + + I +GVG
Sbjct: 44 DCKEERCDTNKRKGSAMGEDVGDDSRSVDRSHETEVHVFNDKQDKAVEIKNILHDGVGQS 103
Query: 499 AAAQSQLG*RNRRRDGSTEKEK 564
Q QLG N RR+G+ +K +
Sbjct: 104 DYGQRQLGLDNERRNGTVDKSR 125
>05_04_0135 +
18322962-18323136,18323182-18323237,18323749-18323885,
18324679-18324865,18324958-18325080,18325828-18326112
Length = 320
Score = 31.9 bits (69), Expect = 0.54
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 152 LVQMLKDEDNKYCVDCDAKGPRWA 223
L +LK NK+C DC P+WA
Sbjct: 100 LEHLLKQPANKFCADCGTPDPKWA 123
>12_02_0800 + 23299674-23299678,23299714-23299791,23299876-23299920,
23300052-23300415,23300493-23300574,23300793-23300873,
23300974-23302106,23302202-23302350,23302426-23302516,
23303628-23305940
Length = 1446
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +2
Query: 221 ASWNLGIFLCIRCAGIHRNLGVHISKVKSVNLDSWTPEQVVSLQQMGNSR 370
A W+ G+ + AG++ N G +++K K ++ + P+ + Q N R
Sbjct: 1026 AMWSTGVVAPTQPAGLNTNDGENVTKTKRAEMERYVPKPLSKELQQQNLR 1075
>01_06_0924 -
33058194-33058697,33058798-33060147,33060234-33060303,
33060918-33060976
Length = 660
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -3
Query: 720 LVSGCAGGVLLPSLGLTEDFGFGMLGITSDLLYFLSATAGAGRG 589
L C +L+P+LG T + + + + L YF+S+T G G G
Sbjct: 371 LEDACLDDLLVPNLGYTVETLYDIDCVQRILDYFMSSTDGLGTG 414
>06_03_1303 +
29180837-29181205,29181289-29181306,29181337-29181622,
29185008-29186284,29186499-29187005
Length = 818
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Frame = +2
Query: 410 RRPQNDMSLESFIRAKYEQKKYIA-----KEWVPPQLP-KVN----WDKEIDEEMDRQKR 559
RR D +KY+ KY+ K+++ QL KV +DK ++ E +R+++
Sbjct: 465 RRSLLDQVRSGSFWSKYKHTKYVPVSEKLKDFIYAQLEEKVRRLSEYDKRMERERERERK 524
Query: 560 KKKSATSSLGPLPAPA 607
+ ++ + S P P+P+
Sbjct: 525 RVRAPSPSPSPSPSPS 540
>11_06_0261 -
21765167-21765373,21765828-21766097,21767330-21767377,
21767472-21767600,21767701-21767961,21768072-21768164,
21768252-21768344,21769403-21769496,21769609-21770072
Length = 552
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 156 CKCLKMKTTNTALTVMQKVHDGLHGIWVYSCASA 257
C C+ T TA + V+ GLH +Y+ ASA
Sbjct: 451 CNCVNEVPTKTAELAISHVYKGLHSESMYTLASA 484
>11_04_0417 - 17438023-17438331,17438706-17438795
Length = 132
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 305 SVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYE 463
++ L++W +Q+ Q G AR V A LPD R E+ + Y+
Sbjct: 46 TMELNAWEIQQLNHFLQEGQGIAREVLRAKLPDDIVRDVGRTRREALVLRLYD 98
>12_02_0349 - 17820352-17821238,17822976-17823363
Length = 424
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 221 ASW-NLGIFLCIRCAGIHRNL 280
ASW LG LC+ CAG+HR L
Sbjct: 36 ASWLRLGPPLCLLCAGVHRLL 56
>11_06_0195 - 21138029-21138389,21139796-21140052
Length = 205
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 454 QIRTEEIHCEGVGAPAAAQSQLG*RNRRRDGSTEKEKE 567
+IR EE AP+++ S+ G R R RDGST ++
Sbjct: 66 RIRLEEKLRGAAAAPSSSLSRWGRRFRERDGSTTSRQQ 103
>07_03_1489 +
26933029-26933077,26933704-26933838,26934354-26934478,
26934558-26934626,26934730-26934798,26935095-26935157,
26935280-26936533
Length = 587
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 452 AKYEQKKYIAKEWVPPQLPKVNWDKEIDEEMDRQKRKKK 568
A Y K W PP NW++E DEE + ++ K+
Sbjct: 447 AFYHDDKVGIPVWSPPYPDGNNWEEEEDEEEEEEEGDKE 485
>06_03_1507 -
30646168-30646254,30646350-30646490,30648109-30648202,
30648445-30648509,30648934-30649176,30649442-30649499,
30649957-30650037,30650323-30650533,30650975-30651141,
30651216-30651268,30651600-30651681,30651765-30651914,
30652027-30652111,30652189-30652393,30652502-30652573,
30652911-30653456
Length = 779
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = -1
Query: 362 FPFAVATPLALESTNRD*HSSLWRCEHPDSDGSQRSGCTGIYPNSMKPIVDLLHHS 195
F FA+A+ AL ST SS P+S +R CT P S P++ L H+
Sbjct: 27 FAFAIASQAALSSTLGRTRSSSSASATPNSKRPRRPPCT---PESDPPVLALRAHT 79
>02_01_0117 - 866336-866890,867484-869010
Length = 693
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -3
Query: 723 LLVSGCAGGVLLPSLGLTEDFGFGMLGITSDLLYFLSATAGAGRG 589
L G G++ + L +DF G L +TS F+S G G G
Sbjct: 472 LAACGLMMGIVSTASDLVQDFKTGYLTLTSPRSMFVSQVLGTGMG 516
>12_02_0090 + 13493311-13494180
Length = 289
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -1
Query: 605 RGPAGVRAMTSPTSFSFSVDPSLRLFLYPS*LWAAAGAPTPSQCISSVRI 456
R P+ V A ++PT+ S + PSL L P A AP P+ S ++
Sbjct: 77 RRPSAVVATSTPTAPSQTTAPSLATILVP----ATTSAPKPATASSPTKV 122
>10_06_0053 -
10110617-10111271,10112023-10112417,10112565-10112650,
10112973-10113021,10114164-10114290,10114372-10114526,
10114730-10114948
Length = 561
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +2
Query: 170 DEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVH 289
D CV CD G R +W+ G C AG R L H
Sbjct: 50 DPSGVACVRCDVNGERVRAWSCGAKTCGMGAG--RKLKTH 87
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,291,608
Number of Sequences: 37544
Number of extensions: 474211
Number of successful extensions: 1656
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1643
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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