Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30b14
         (749 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC142694-1|AAI42695.1|  910|Homo sapiens membrane-associated rin...    32   2.5  
BC142679-1|AAI42680.1|  910|Homo sapiens membrane-associated rin...    32   2.5  
BC046148-1|AAH46148.1|  635|Homo sapiens MARCH6 protein protein.       32   2.5  
AB011169-1|BAA25523.1|  971|Homo sapiens KIAA0597 protein protein.     32   2.5  

>BC142694-1|AAI42695.1|  910|Homo sapiens membrane-associated ring
           finger (C3HC4) 6 protein.
          Length = 910

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 16/34 (47%), Positives = 25/34 (73%)
 Frame = -3

Query: 675 VCRSVLKVALQIMVEIRLFHNVCGSYKIDLNSLE 574
           VC  V+KV+L ++VEI +F  +CG + +D+ SLE
Sbjct: 368 VCYIVVKVSLLVVVEIGVFPLICG-WWLDICSLE 400


>BC142679-1|AAI42680.1|  910|Homo sapiens membrane-associated ring
           finger (C3HC4) 6 protein.
          Length = 910

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 16/34 (47%), Positives = 25/34 (73%)
 Frame = -3

Query: 675 VCRSVLKVALQIMVEIRLFHNVCGSYKIDLNSLE 574
           VC  V+KV+L ++VEI +F  +CG + +D+ SLE
Sbjct: 368 VCYIVVKVSLLVVVEIGVFPLICG-WWLDICSLE 400


>BC046148-1|AAH46148.1|  635|Homo sapiens MARCH6 protein protein.
          Length = 635

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 16/34 (47%), Positives = 25/34 (73%)
 Frame = -3

Query: 675 VCRSVLKVALQIMVEIRLFHNVCGSYKIDLNSLE 574
           VC  V+KV+L ++VEI +F  +CG + +D+ SLE
Sbjct: 93  VCYIVVKVSLLVVVEIGVFPLICG-WWLDICSLE 125


>AB011169-1|BAA25523.1|  971|Homo sapiens KIAA0597 protein protein.
          Length = 971

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 16/34 (47%), Positives = 25/34 (73%)
 Frame = -3

Query: 675 VCRSVLKVALQIMVEIRLFHNVCGSYKIDLNSLE 574
           VC  V+KV+L ++VEI +F  +CG + +D+ SLE
Sbjct: 429 VCYIVVKVSLLVVVEIGVFPLICG-WWLDICSLE 461


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,373,145
Number of Sequences: 237096
Number of extensions: 1678048
Number of successful extensions: 6296
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6296
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)