Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30b14
         (749 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023847-1|CAA19545.1|  364|Caenorhabditis elegans Hypothetical ...    30   1.5  
AF016676-8|AAG24105.1|  502|Caenorhabditis elegans Hypothetical ...    29   3.5  
Z81139-5|CAB03481.2|  359|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U97592-5|AAB52873.1|  597|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U23453-9|AAC46755.1|  727|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>AL023847-1|CAA19545.1|  364|Caenorhabditis elegans Hypothetical
           protein Y57A10C.3 protein.
          Length = 364

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = -3

Query: 681 YSVCRSVLKVALQIMVEIRLFH 616
           YS+C  ++ V+L+I V++R+FH
Sbjct: 40  YSICLYIVVVSLKIFVQVRMFH 61


>AF016676-8|AAG24105.1|  502|Caenorhabditis elegans Hypothetical
           protein F41B5.9 protein.
          Length = 502

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 19/65 (29%), Positives = 26/65 (40%)
 Frame = +2

Query: 173 HXTHNSKRRSPNYXLYFGNWRGISKFLNNRRTSLRKDGTEQRQAWRHYVFKLNLQDISQK 352
           H  +   R+ PNY         + K  N  RT LR+   + + A    VFKL        
Sbjct: 373 HHYYQEVRKLPNYSARLAR---MMKVNNLMRTDLRQKSEKAKLAMAFDVFKLQFSHPEMI 429

Query: 353 YFDGN 367
           Y DG+
Sbjct: 430 YLDGD 434


>Z81139-5|CAB03481.2|  359|Caenorhabditis elegans Hypothetical
           protein W05H5.6 protein.
          Length = 359

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = -3

Query: 681 YSVCRSVLKVALQIMVEIRLFHNVCGSYKIDLNSLEYCKYQLFYLGKTLTIIFTFHLI 508
           Y VC  ++ V+L + ++IRLFH     Y + L       Y+L  +GK +TI +   L+
Sbjct: 39  YLVCIHLVNVSLHVALKIRLFHR--NLYILALPMFGMW-YELI-IGKFITIAYRLKLL 92


>U97592-5|AAB52873.1|  597|Caenorhabditis elegans Hypothetical
           protein C14A11.6 protein.
          Length = 597

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -1

Query: 425 KNCIHCRRRLYEKSNFRKNNFHRSTSAICLEGLI*KHNVSKPVFVQFRLF 276
           K C H   R++E++NF +N+    T  +    LI   N ++   V F +F
Sbjct: 44  KTCSHLEIRIFERNNFLENSERNDTMELMTRKLIRVSN-NQSQLVSFWIF 92


>U23453-9|AAC46755.1|  727|Caenorhabditis elegans Hypothetical
           protein B0252.1 protein.
          Length = 727

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -3

Query: 633 EIRLFHNVCGSYK--IDLNSLEYCKYQLFYLGKTLTIIFTFHLIENIS 496
           +IR F ++  SY   +  NS +  KY  ++     TI+ T  LI+ IS
Sbjct: 52  DIRQFEDLLNSYGRLMPFNSTQQIKYDFYFGSNYSTIVTTNDLIKEIS 99


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,423,561
Number of Sequences: 27780
Number of extensions: 307883
Number of successful extensions: 653
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)