Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30b13
(769 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015578-1|AAH15578.1| 336|Homo sapiens torsin family 1, member... 122 1e-27
AL158207-1|CAC88165.1| 336|Homo sapiens torsin family 1, member... 122 1e-27
BT006931-1|AAP35577.1| 332|Homo sapiens dystonia 1, torsion (au... 102 2e-21
BC000674-1|AAH00674.1| 332|Homo sapiens torsin family 1, member... 102 2e-21
AL158207-3|CAC88168.1| 332|Homo sapiens torsin family 1, member... 102 2e-21
AF007871-1|AAC51732.1| 332|Homo sapiens torsinA protein. 102 2e-21
AF007872-1|AAC51733.1| 266|Homo sapiens torsinB protein. 97 6e-20
AL158207-2|CAC88166.1| 140|Homo sapiens torsin family 1, member... 95 3e-19
CR457354-1|CAG33635.1| 397|Homo sapiens TOR3A protein. 89 1e-17
BC018292-1|AAH18292.1| 397|Homo sapiens torsin family 3, member... 89 1e-17
BC011746-1|AAH11746.1| 397|Homo sapiens torsin family 3, member... 89 1e-17
BC007571-1|AAH07571.1| 397|Homo sapiens torsin family 3, member... 89 1e-17
BC001085-1|AAH01085.1| 397|Homo sapiens torsin family 3, member... 89 1e-17
AL139132-8|CAH70929.1| 336|Homo sapiens torsin family 3, member... 89 1e-17
AL139132-7|CAH70928.1| 397|Homo sapiens torsin family 3, member... 89 1e-17
AK025998-1|BAB15312.1| 397|Homo sapiens protein ( Homo sapiens ... 89 1e-17
AJ318044-2|CAC88130.1| 336|Homo sapiens ADIR2 protein. 89 1e-17
AJ318044-1|CAC88129.1| 397|Homo sapiens ADIR1 protein. 89 1e-17
AJ299441-1|CAC14461.1| 336|Homo sapiens ADIR2 protein. 89 1e-17
AJ299403-1|CAC13973.1| 397|Homo sapiens ADIR1 protein. 89 1e-17
AL139132-9|CAH70930.1| 174|Homo sapiens torsin family 3, member... 78 4e-14
BC014484-1|AAH14484.1| 197|Homo sapiens TOR1A protein protein. 77 9e-14
AY358180-1|AAQ88547.1| 321|Homo sapiens TOR2A protein. 72 2e-12
AL162426-12|CAI41187.1| 253|Homo sapiens torsin family 2, membe... 72 2e-12
AL162426-11|CAI41186.1| 321|Homo sapiens torsin family 2, membe... 72 2e-12
AL162426-10|CAI41185.1| 242|Homo sapiens torsin family 2, membe... 72 2e-12
AK075520-1|BAC11667.1| 242|Homo sapiens protein ( Homo sapiens ... 72 2e-12
AK027677-1|BAB55288.1| 253|Homo sapiens protein ( Homo sapiens ... 72 2e-12
AK092388-1|BAC03876.1| 136|Homo sapiens protein ( Homo sapiens ... 49 2e-05
BX255925-5|CAM24150.1| 423|Homo sapiens novel protein (FLJ20245... 36 0.21
AK000252-1|BAA91032.1| 423|Homo sapiens protein ( Homo sapiens ... 36 0.21
BC006404-1|AAH06404.1| 707|Homo sapiens ClpB caseinolytic pepti... 33 0.85
AK023214-1|BAB14467.1| 677|Homo sapiens protein ( Homo sapiens ... 33 0.85
AL139132-6|CAH70927.1| 153|Homo sapiens torsin family 3, member... 33 1.1
BC006257-1|AAH06257.1| 315|Homo sapiens CLPB protein protein. 32 2.0
AL834484-1|CAD39142.1| 322|Homo sapiens hypothetical protein pr... 32 2.0
BC005038-1|AAH05038.1| 789|Homo sapiens CHD1L protein protein. 30 7.9
>BC015578-1|AAH15578.1| 336|Homo sapiens torsin family 1, member B
(torsin B) protein.
Length = 336
Score = 122 bits (294), Expect = 1e-27
Identities = 67/187 (35%), Positives = 103/187 (55%), Gaps = 2/187 (1%)
Frame = +2
Query: 215 EPITISLVGSAIVLASGWYKWDTLKDATYCKFTECCNDYHIPFDVQKLRDSLSQRMFGQP 394
EPIT+ L A +G+ ++ + YC+F ECC + P + L+ L +++FGQ
Sbjct: 26 EPITVGLAIGAASAITGYLSYNDI----YCRFAECCREER-PLNASALKLDLEEKLFGQH 80
Query: 395 LVNE-LFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYRKGMQSNYV 571
L E +F ++ + N N KK L +SLHGW+G GKNF S ++AE ++ KG++SN+V
Sbjct: 81 LATEVIFKALTGFRNNKNP----KKPLTLSLHGWAGTGKNFVSQIVAENLHPKGLKSNFV 136
Query: 572 KLFMGKKDFDCYELEKKKQ-MLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLDTIIPMLDH 748
LF+ F + K Q L + V C S+ IFDE+ + P ++D I P LD+
Sbjct: 137 HLFVSTLHFPHEQKIKLYQDQLQKWIRGNVSACANSVFIFDEMDKLHPGIIDAIKPFLDY 196
Query: 749 HSAVDEV 769
+ VD V
Sbjct: 197 YEQVDGV 203
>AL158207-1|CAC88165.1| 336|Homo sapiens torsin family 1, member B
(torsin B) protein.
Length = 336
Score = 122 bits (294), Expect = 1e-27
Identities = 67/187 (35%), Positives = 103/187 (55%), Gaps = 2/187 (1%)
Frame = +2
Query: 215 EPITISLVGSAIVLASGWYKWDTLKDATYCKFTECCNDYHIPFDVQKLRDSLSQRMFGQP 394
EPIT+ L A +G+ ++ + YC+F ECC + P + L+ L +++FGQ
Sbjct: 26 EPITVGLAIGAASAITGYLSYNDI----YCRFAECCREER-PLNASALKLDLEEKLFGQH 80
Query: 395 LVNE-LFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYRKGMQSNYV 571
L E +F ++ + N N KK L +SLHGW+G GKNF S ++AE ++ KG++SN+V
Sbjct: 81 LATEVIFKALTGFRNNKNP----KKPLTLSLHGWAGTGKNFVSQIVAENLHPKGLKSNFV 136
Query: 572 KLFMGKKDFDCYELEKKKQ-MLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLDTIIPMLDH 748
LF+ F + K Q L + V C S+ IFDE+ + P ++D I P LD+
Sbjct: 137 HLFVSTLHFPHEQKIKLYQDQLQKWIRGNVSACANSVFIFDEMDKLHPGIIDAIKPFLDY 196
Query: 749 HSAVDEV 769
+ VD V
Sbjct: 197 YEQVDGV 203
>BT006931-1|AAP35577.1| 332|Homo sapiens dystonia 1, torsion
(autosomal dominant; torsin A) protein.
Length = 332
Score = 102 bits (244), Expect = 2e-21
Identities = 60/158 (37%), Positives = 82/158 (51%), Gaps = 1/158 (0%)
Frame = +2
Query: 299 YCKFTECCNDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVI 478
YC F ECC + L+ L +FGQ L ++ I++A IN KK L +
Sbjct: 43 YCLFAECCGQKR-SLSREALQKDLDDNLFGQHLAKKI--ILNAVFGFINNPKP-KKPLTL 98
Query: 479 SLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMGKKDF-DCYELEKKKQMLVNTLNTL 655
SLHGW+G GKNF S +IAE IY G+ S+YV LF+ F + K L +
Sbjct: 99 SLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGN 158
Query: 656 VKKCPKSLIIFDEIHHMCPSVLDTIIPMLDHHSAVDEV 769
V C +S+ IFDE+ M ++D I P LD++ VD V
Sbjct: 159 VSACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGV 196
>BC000674-1|AAH00674.1| 332|Homo sapiens torsin family 1, member A
(torsin A) protein.
Length = 332
Score = 102 bits (244), Expect = 2e-21
Identities = 60/158 (37%), Positives = 82/158 (51%), Gaps = 1/158 (0%)
Frame = +2
Query: 299 YCKFTECCNDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVI 478
YC F ECC + L+ L +FGQ L ++ I++A IN KK L +
Sbjct: 43 YCLFAECCGQKR-SLSREALQKDLDDNLFGQHLAKKI--ILNAVFGFINNPKP-KKPLTL 98
Query: 479 SLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMGKKDF-DCYELEKKKQMLVNTLNTL 655
SLHGW+G GKNF S +IAE IY G+ S+YV LF+ F + K L +
Sbjct: 99 SLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGN 158
Query: 656 VKKCPKSLIIFDEIHHMCPSVLDTIIPMLDHHSAVDEV 769
V C +S+ IFDE+ M ++D I P LD++ VD V
Sbjct: 159 VSACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGV 196
>AL158207-3|CAC88168.1| 332|Homo sapiens torsin family 1, member A
(torsin A) protein.
Length = 332
Score = 102 bits (244), Expect = 2e-21
Identities = 60/158 (37%), Positives = 82/158 (51%), Gaps = 1/158 (0%)
Frame = +2
Query: 299 YCKFTECCNDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVI 478
YC F ECC + L+ L +FGQ L ++ I++A IN KK L +
Sbjct: 43 YCLFAECCGQKR-SLSREALQKDLDDNLFGQHLAKKI--ILNAVFGFINNPKP-KKPLTL 98
Query: 479 SLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMGKKDF-DCYELEKKKQMLVNTLNTL 655
SLHGW+G GKNF S +IAE IY G+ S+YV LF+ F + K L +
Sbjct: 99 SLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGN 158
Query: 656 VKKCPKSLIIFDEIHHMCPSVLDTIIPMLDHHSAVDEV 769
V C +S+ IFDE+ M ++D I P LD++ VD V
Sbjct: 159 VSACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGV 196
>AF007871-1|AAC51732.1| 332|Homo sapiens torsinA protein.
Length = 332
Score = 102 bits (244), Expect = 2e-21
Identities = 60/158 (37%), Positives = 82/158 (51%), Gaps = 1/158 (0%)
Frame = +2
Query: 299 YCKFTECCNDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVI 478
YC F ECC + L+ L +FGQ L ++ I++A IN KK L +
Sbjct: 43 YCLFAECCGQKR-SLSREALQKDLDDNLFGQHLAKKI--ILNAVFGFINNPKP-KKPLTL 98
Query: 479 SLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMGKKDF-DCYELEKKKQMLVNTLNTL 655
SLHGW+G GKNF S +IAE IY G+ S+YV LF+ F + K L +
Sbjct: 99 SLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGN 158
Query: 656 VKKCPKSLIIFDEIHHMCPSVLDTIIPMLDHHSAVDEV 769
V C +S+ IFDE+ M ++D I P LD++ VD V
Sbjct: 159 VSACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGV 196
>AF007872-1|AAC51733.1| 266|Homo sapiens torsinB protein.
Length = 266
Score = 97.1 bits (231), Expect = 6e-20
Identities = 52/136 (38%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Frame = +2
Query: 368 LSQRMFGQPLVNE-LFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIY 544
L +++FGQ L E +F ++ + N N KK L +SLHGW+G GKNF S ++AE ++
Sbjct: 2 LEEKLFGQHLATEVIFKALTGFRNNKNP----KKPLTLSLHGWAGTGKNFVSQIVAENLH 57
Query: 545 RKGMQSNYVKLFMGKKDFDCYELEKKKQ-MLVNTLNTLVKKCPKSLIIFDEIHHMCPSVL 721
KG++SN+V LF+ F + K Q L + V C S+ IFDE+ + P ++
Sbjct: 58 PKGLKSNFVHLFVSTLHFPHEQKIKLYQDQLQKWIRGNVSACANSVFIFDEMDKLHPGII 117
Query: 722 DTIIPMLDHHSAVDEV 769
D I P LD++ VD V
Sbjct: 118 DAIKPFLDYYEQVDGV 133
>AL158207-2|CAC88166.1| 140|Homo sapiens torsin family 1, member B
(torsin B) protein.
Length = 140
Score = 94.7 bits (225), Expect = 3e-19
Identities = 48/129 (37%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Frame = +2
Query: 215 EPITISLVGSAIVLASGWYKWDTLKDATYCKFTECCNDYHIPFDVQKLRDSLSQRMFGQP 394
EPIT+ L A +G+ ++ + YC+F ECC + P + L+ L +++FGQ
Sbjct: 7 EPITVGLAIGAASAITGYLSYNDI----YCRFAECCREER-PLNASALKLDLEEKLFGQH 61
Query: 395 LVNE-LFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYRKGMQSNYV 571
L E +F ++ + N N KK L +SLHGW+G GKNF S ++AE ++ KG++SN+V
Sbjct: 62 LATEVIFKALTGFRNNKNP----KKPLTLSLHGWAGTGKNFVSQIVAENLHPKGLKSNFV 117
Query: 572 KLFMGKKDF 598
LF+ F
Sbjct: 118 HLFVSTLHF 126
>CR457354-1|CAG33635.1| 397|Homo sapiens TOR3A protein.
Length = 397
Score = 89.4 bits (212), Expect = 1e-17
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Frame = +2
Query: 299 YCKFTECC--NDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKAL 472
YC F +CC D I + L L+ R+ GQ LV +L + E+ +KAL
Sbjct: 105 YCSFKDCCPRGDCRISNNFTGLEWDLNVRLHGQHLVQQL---VLRTVRGYLETPQPEKAL 161
Query: 473 VISLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLN 649
+S HGWSG GKNF + M+ E +YR G+ S+ V++F+ F + ++ K+ L++ +
Sbjct: 162 ALSFHGWSGTGKNFVARMLVENLYRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIR 221
Query: 650 TLVKKCPKSLIIFDEIHHMCPSVLDTIIPMLDHHS 754
+ C ++L IFDE + P +L+ + P L+ +
Sbjct: 222 ETQQLCHQTLFIFDEAEKLHPGLLEVLGPHLERRA 256
>BC018292-1|AAH18292.1| 397|Homo sapiens torsin family 3, member A
protein.
Length = 397
Score = 89.4 bits (212), Expect = 1e-17
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Frame = +2
Query: 299 YCKFTECC--NDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKAL 472
YC F +CC D I + L L+ R+ GQ LV +L + E+ +KAL
Sbjct: 105 YCSFKDCCPRGDCRISNNFTGLEWDLNVRLHGQHLVQQL---VLRTVRGYLETPQPEKAL 161
Query: 473 VISLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLN 649
+S HGWSG GKNF + M+ E +YR G+ S+ V++F+ F + ++ K+ L++ +
Sbjct: 162 ALSFHGWSGTGKNFVARMLVENLYRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIR 221
Query: 650 TLVKKCPKSLIIFDEIHHMCPSVLDTIIPMLDHHS 754
+ C ++L IFDE + P +L+ + P L+ +
Sbjct: 222 ETQQLCHQTLFIFDEAEKLHPGLLEVLGPHLERRA 256
>BC011746-1|AAH11746.1| 397|Homo sapiens torsin family 3, member A
protein.
Length = 397
Score = 89.4 bits (212), Expect = 1e-17
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Frame = +2
Query: 299 YCKFTECC--NDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKAL 472
YC F +CC D I + L L+ R+ GQ LV +L + E+ +KAL
Sbjct: 105 YCSFKDCCPRGDCRISNNFTGLEWDLNVRLHGQHLVQQL---VLRTVRGYLETPQPEKAL 161
Query: 473 VISLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLN 649
+S HGWSG GKNF + M+ E +YR G+ S+ V++F+ F + ++ K+ L++ +
Sbjct: 162 ALSFHGWSGTGKNFVARMLVENLYRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIR 221
Query: 650 TLVKKCPKSLIIFDEIHHMCPSVLDTIIPMLDHHS 754
+ C ++L IFDE + P +L+ + P L+ +
Sbjct: 222 ETQQLCHQTLFIFDEAEKLHPGLLEVLGPHLERRA 256
>BC007571-1|AAH07571.1| 397|Homo sapiens torsin family 3, member A
protein.
Length = 397
Score = 89.4 bits (212), Expect = 1e-17
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Frame = +2
Query: 299 YCKFTECC--NDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKAL 472
YC F +CC D I + L L+ R+ GQ LV +L + E+ +KAL
Sbjct: 105 YCSFKDCCPRGDCRISNNFTGLEWDLNVRLHGQHLVQQL---VLRTVRGYLETPQPEKAL 161
Query: 473 VISLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLN 649
+S HGWSG GKNF + M+ E +YR G+ S+ V++F+ F + ++ K+ L++ +
Sbjct: 162 ALSFHGWSGTGKNFVARMLVENLYRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIR 221
Query: 650 TLVKKCPKSLIIFDEIHHMCPSVLDTIIPMLDHHS 754
+ C ++L IFDE + P +L+ + P L+ +
Sbjct: 222 ETQQLCHQTLFIFDEAEKLHPGLLEVLGPHLERRA 256
>BC001085-1|AAH01085.1| 397|Homo sapiens torsin family 3, member A
protein.
Length = 397
Score = 89.4 bits (212), Expect = 1e-17
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Frame = +2
Query: 299 YCKFTECC--NDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKAL 472
YC F +CC D I + L L+ R+ GQ LV +L + E+ +KAL
Sbjct: 105 YCSFKDCCPRGDCRISNNFTGLEWDLNVRLHGQHLVQQL---VLRTVRGYLETPQPEKAL 161
Query: 473 VISLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLN 649
+S HGWSG GKNF + M+ E +YR G+ S+ V++F+ F + ++ K+ L++ +
Sbjct: 162 ALSFHGWSGTGKNFVARMLVENLYRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIR 221
Query: 650 TLVKKCPKSLIIFDEIHHMCPSVLDTIIPMLDHHS 754
+ C ++L IFDE + P +L+ + P L+ +
Sbjct: 222 ETQQLCHQTLFIFDEAEKLHPGLLEVLGPHLERRA 256
>AL139132-8|CAH70929.1| 336|Homo sapiens torsin family 3, member A
protein.
Length = 336
Score = 89.4 bits (212), Expect = 1e-17
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Frame = +2
Query: 299 YCKFTECC--NDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKAL 472
YC F +CC D I + L L+ R+ GQ LV +L + E+ +KAL
Sbjct: 105 YCSFKDCCPRGDCRISNNFTGLEWDLNVRLHGQHLVQQL---VLRTVRGYLETPQPEKAL 161
Query: 473 VISLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLN 649
+S HGWSG GKNF + M+ E +YR G+ S+ V++F+ F + ++ K+ L++ +
Sbjct: 162 ALSFHGWSGTGKNFVARMLVENLYRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIR 221
Query: 650 TLVKKCPKSLIIFDEIHHMCPSVLDTIIPMLDHHS 754
+ C ++L IFDE + P +L+ + P L+ +
Sbjct: 222 ETQQLCHQTLFIFDEAEKLHPGLLEVLGPHLERRA 256
>AL139132-7|CAH70928.1| 397|Homo sapiens torsin family 3, member A
protein.
Length = 397
Score = 89.4 bits (212), Expect = 1e-17
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Frame = +2
Query: 299 YCKFTECC--NDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKAL 472
YC F +CC D I + L L+ R+ GQ LV +L + E+ +KAL
Sbjct: 105 YCSFKDCCPRGDCRISNNFTGLEWDLNVRLHGQHLVQQL---VLRTVRGYLETPQPEKAL 161
Query: 473 VISLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLN 649
+S HGWSG GKNF + M+ E +YR G+ S+ V++F+ F + ++ K+ L++ +
Sbjct: 162 ALSFHGWSGTGKNFVARMLVENLYRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIR 221
Query: 650 TLVKKCPKSLIIFDEIHHMCPSVLDTIIPMLDHHS 754
+ C ++L IFDE + P +L+ + P L+ +
Sbjct: 222 ETQQLCHQTLFIFDEAEKLHPGLLEVLGPHLERRA 256
>AK025998-1|BAB15312.1| 397|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22345 fis, clone HRC06114. ).
Length = 397
Score = 89.4 bits (212), Expect = 1e-17
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Frame = +2
Query: 299 YCKFTECC--NDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKAL 472
YC F +CC D I + L L+ R+ GQ LV +L + E+ +KAL
Sbjct: 105 YCSFKDCCPRGDCRISNNFTGLEWDLNVRLHGQHLVQQL---VLRTVRGYLETPQPEKAL 161
Query: 473 VISLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLN 649
+S HGWSG GKNF + M+ E +YR G+ S+ V++F+ F + ++ K+ L++ +
Sbjct: 162 ALSFHGWSGTGKNFVARMLVENLYRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIR 221
Query: 650 TLVKKCPKSLIIFDEIHHMCPSVLDTIIPMLDHHS 754
+ C ++L IFDE + P +L+ + P L+ +
Sbjct: 222 ETQQLCHQTLFIFDEAEKLHPGLLEVLGPHLERRA 256
>AJ318044-2|CAC88130.1| 336|Homo sapiens ADIR2 protein.
Length = 336
Score = 89.4 bits (212), Expect = 1e-17
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Frame = +2
Query: 299 YCKFTECC--NDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKAL 472
YC F +CC D I + L L+ R+ GQ LV +L + E+ +KAL
Sbjct: 105 YCSFKDCCPRGDCRISNNFTGLEWDLNVRLHGQHLVQQL---VLRTVRGYLETPQPEKAL 161
Query: 473 VISLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLN 649
+S HGWSG GKNF + M+ E +YR G+ S+ V++F+ F + ++ K+ L++ +
Sbjct: 162 ALSFHGWSGTGKNFVARMLVENLYRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIR 221
Query: 650 TLVKKCPKSLIIFDEIHHMCPSVLDTIIPMLDHHS 754
+ C ++L IFDE + P +L+ + P L+ +
Sbjct: 222 ETQQLCHQTLFIFDEAEKLHPGLLEVLGPHLERRA 256
>AJ318044-1|CAC88129.1| 397|Homo sapiens ADIR1 protein.
Length = 397
Score = 89.4 bits (212), Expect = 1e-17
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Frame = +2
Query: 299 YCKFTECC--NDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKAL 472
YC F +CC D I + L L+ R+ GQ LV +L + E+ +KAL
Sbjct: 105 YCSFKDCCPRGDCRISNNFTGLEWDLNVRLHGQHLVQQL---VLRTVRGYLETPQPEKAL 161
Query: 473 VISLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLN 649
+S HGWSG GKNF + M+ E +YR G+ S+ V++F+ F + ++ K+ L++ +
Sbjct: 162 ALSFHGWSGTGKNFVARMLVENLYRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIR 221
Query: 650 TLVKKCPKSLIIFDEIHHMCPSVLDTIIPMLDHHS 754
+ C ++L IFDE + P +L+ + P L+ +
Sbjct: 222 ETQQLCHQTLFIFDEAEKLHPGLLEVLGPHLERRA 256
>AJ299441-1|CAC14461.1| 336|Homo sapiens ADIR2 protein.
Length = 336
Score = 89.4 bits (212), Expect = 1e-17
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Frame = +2
Query: 299 YCKFTECC--NDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKAL 472
YC F +CC D I + L L+ R+ GQ LV +L + E+ +KAL
Sbjct: 105 YCSFKDCCPRGDCRISNNFTGLEWDLNVRLHGQHLVQQL---VLRTVRGYLETPQPEKAL 161
Query: 473 VISLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLN 649
+S HGWSG GKNF + M+ E +YR G+ S+ V++F+ F + ++ K+ L++ +
Sbjct: 162 ALSFHGWSGTGKNFVARMLVENLYRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIR 221
Query: 650 TLVKKCPKSLIIFDEIHHMCPSVLDTIIPMLDHHS 754
+ C ++L IFDE + P +L+ + P L+ +
Sbjct: 222 ETQQLCHQTLFIFDEAEKLHPGLLEVLGPHLERRA 256
>AJ299403-1|CAC13973.1| 397|Homo sapiens ADIR1 protein.
Length = 397
Score = 89.4 bits (212), Expect = 1e-17
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Frame = +2
Query: 299 YCKFTECC--NDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKAL 472
YC F +CC D I + L L+ R+ GQ LV +L + E+ +KAL
Sbjct: 105 YCSFKDCCPRGDCRISNNFTGLEWDLNVRLHGQHLVQQL---VLRTVRGYLETPQPEKAL 161
Query: 473 VISLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLN 649
+S HGWSG GKNF + M+ E +YR G+ S+ V++F+ F + ++ K+ L++ +
Sbjct: 162 ALSFHGWSGTGKNFVARMLVENLYRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIR 221
Query: 650 TLVKKCPKSLIIFDEIHHMCPSVLDTIIPMLDHHS 754
+ C ++L IFDE + P +L+ + P L+ +
Sbjct: 222 ETQQLCHQTLFIFDEAEKLHPGLLEVLGPHLERRA 256
>AL139132-9|CAH70930.1| 174|Homo sapiens torsin family 3, member A
protein.
Length = 174
Score = 77.8 bits (183), Expect = 4e-14
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Frame = +2
Query: 368 LSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYR 547
L+ R+ GQ LV +L + E+ +KAL +S HGWSG GKNF + M+ E +YR
Sbjct: 22 LNVRLHGQHLVQQL---VLRTVRGYLETPQPEKALALSFHGWSGTGKNFVARMLVENLYR 78
Query: 548 KGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLD 724
G+ S+ V++F+ F + ++ K+ L++ + + C ++L IFDE + P +L+
Sbjct: 79 DGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFDEAEKLHPGLLE 138
Query: 725 TIIPMLDHHS 754
+ P L+ +
Sbjct: 139 VLGPHLERRA 148
>BC014484-1|AAH14484.1| 197|Homo sapiens TOR1A protein protein.
Length = 197
Score = 76.6 bits (180), Expect = 9e-14
Identities = 42/100 (42%), Positives = 55/100 (55%)
Frame = +2
Query: 299 YCKFTECCNDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVI 478
YC F ECC + L+ L +FGQ L ++ I++A IN KK L +
Sbjct: 43 YCLFAECCGQKR-SLSREALQKDLDDNLFGQHLAKKI--ILNAVFGFINNPKP-KKPLTL 98
Query: 479 SLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMGKKDF 598
SLHGW+G GKNF S +IAE IY G+ S+YV LF+ F
Sbjct: 99 SLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHF 138
>AY358180-1|AAQ88547.1| 321|Homo sapiens TOR2A protein.
Length = 321
Score = 72.1 bits (169), Expect = 2e-12
Identities = 52/173 (30%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
Frame = +2
Query: 230 SLVGSAIVLASGWYKWDTLK-DATYCKFTECCNDYHIPFDVQKLRDSLSQRMFGQPLVNE 406
SL+G ++++ WD T F EC D+ P D+ L L+Q + GQ L
Sbjct: 13 SLLGLLGLVSAAAAAWDLASLRCTLGAFCEC--DFR-P-DLPGLECDLAQHLAGQHLAKA 68
Query: 407 LFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMG 586
L ++ A K + + K LV+SLHGW+G GK++ S+++A +++ G++S V F
Sbjct: 69 L--VVKALKAFVRDP-APTKPLVLSLHGWTGTGKSYVSSLLAHYLFQGGLRSPRVHHFSP 125
Query: 587 KKDF-DCYELEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLDTIIPML 742
F +E+ K+ L + + + C +SL +FDE+ M P +++ + P L
Sbjct: 126 VLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMPPGLMEVLRPFL 178
>AL162426-12|CAI41187.1| 253|Homo sapiens torsin family 2, member A
protein.
Length = 253
Score = 72.1 bits (169), Expect = 2e-12
Identities = 52/173 (30%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
Frame = +2
Query: 230 SLVGSAIVLASGWYKWDTLK-DATYCKFTECCNDYHIPFDVQKLRDSLSQRMFGQPLVNE 406
SL+G ++++ WD T F EC D+ P D+ L L+Q + GQ L
Sbjct: 13 SLLGLLGLVSAAAAAWDLASLRCTLGAFCEC--DFR-P-DLPGLECDLAQHLAGQHLAKA 68
Query: 407 LFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMG 586
L ++ A K + + K LV+SLHGW+G GK++ S+++A +++ G++S V F
Sbjct: 69 L--VVKALKAFVRDP-APTKPLVLSLHGWTGTGKSYVSSLLAHYLFQGGLRSPRVHHFSP 125
Query: 587 KKDF-DCYELEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLDTIIPML 742
F +E+ K+ L + + + C +SL +FDE+ M P +++ + P L
Sbjct: 126 VLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMPPGLMEVLRPFL 178
>AL162426-11|CAI41186.1| 321|Homo sapiens torsin family 2, member A
protein.
Length = 321
Score = 72.1 bits (169), Expect = 2e-12
Identities = 52/173 (30%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
Frame = +2
Query: 230 SLVGSAIVLASGWYKWDTLK-DATYCKFTECCNDYHIPFDVQKLRDSLSQRMFGQPLVNE 406
SL+G ++++ WD T F EC D+ P D+ L L+Q + GQ L
Sbjct: 13 SLLGLLGLVSAAAAAWDLASLRCTLGAFCEC--DFR-P-DLPGLECDLAQHLAGQHLAKA 68
Query: 407 LFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMG 586
L ++ A K + + K LV+SLHGW+G GK++ S+++A +++ G++S V F
Sbjct: 69 L--VVKALKAFVRDP-APTKPLVLSLHGWTGTGKSYVSSLLAHYLFQGGLRSPRVHHFSP 125
Query: 587 KKDF-DCYELEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLDTIIPML 742
F +E+ K+ L + + + C +SL +FDE+ M P +++ + P L
Sbjct: 126 VLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMPPGLMEVLRPFL 178
>AL162426-10|CAI41185.1| 242|Homo sapiens torsin family 2, member A
protein.
Length = 242
Score = 72.1 bits (169), Expect = 2e-12
Identities = 52/173 (30%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
Frame = +2
Query: 230 SLVGSAIVLASGWYKWDTLK-DATYCKFTECCNDYHIPFDVQKLRDSLSQRMFGQPLVNE 406
SL+G ++++ WD T F EC D+ P D+ L L+Q + GQ L
Sbjct: 13 SLLGLLGLVSAAAAAWDLASLRCTLGAFCEC--DFR-P-DLPGLECDLAQHLAGQHLAKA 68
Query: 407 LFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMG 586
L ++ A K + + K LV+SLHGW+G GK++ S+++A +++ G++S V F
Sbjct: 69 L--VVKALKAFVRDP-APTKPLVLSLHGWTGTGKSYVSSLLAHYLFQGGLRSPRVHHFSP 125
Query: 587 KKDF-DCYELEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLDTIIPML 742
F +E+ K+ L + + + C +SL +FDE+ M P +++ + P L
Sbjct: 126 VLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMPPGLMEVLRPFL 178
>AK075520-1|BAC11667.1| 242|Homo sapiens protein ( Homo sapiens
cDNA PSEC0218 fis, clone HEMBA1005096, highly similar to
Torsin family 2, member A. ).
Length = 242
Score = 72.1 bits (169), Expect = 2e-12
Identities = 52/173 (30%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
Frame = +2
Query: 230 SLVGSAIVLASGWYKWDTLK-DATYCKFTECCNDYHIPFDVQKLRDSLSQRMFGQPLVNE 406
SL+G ++++ WD T F EC D+ P D+ L L+Q + GQ L
Sbjct: 13 SLLGLLGLVSAAAAAWDLASLRCTLGAFCEC--DFR-P-DLPGLECDLAQHLAGQHLAKA 68
Query: 407 LFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMG 586
L ++ A K + + K LV+SLHGW+G GK++ S+++A +++ G++S V F
Sbjct: 69 L--VVKALKAFVRDP-APTKPLVLSLHGWTGTGKSYVSSLLAHYLFQGGLRSPRVHHFSP 125
Query: 587 KKDF-DCYELEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLDTIIPML 742
F +E+ K+ L + + + C +SL +FDE+ M P +++ + P L
Sbjct: 126 VLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMPPGLMEVLRPFL 178
>AK027677-1|BAB55288.1| 253|Homo sapiens protein ( Homo sapiens
cDNA FLJ14771 fis, clone NT2RP3004282, weakly similar to
Homo sapiens torsinA (DYT1) mRNA. ).
Length = 253
Score = 72.1 bits (169), Expect = 2e-12
Identities = 52/173 (30%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
Frame = +2
Query: 230 SLVGSAIVLASGWYKWDTLK-DATYCKFTECCNDYHIPFDVQKLRDSLSQRMFGQPLVNE 406
SL+G ++++ WD T F EC D+ P D+ L L+Q + GQ L
Sbjct: 13 SLLGLLGLVSAAAAAWDLASLRCTLGAFCEC--DFR-P-DLPGLECDLAQHLAGQHLAKA 68
Query: 407 LFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMG 586
L ++ A K + + K LV+SLHGW+G GK++ S+++A +++ G++S V F
Sbjct: 69 L--VVKALKAFVRDP-APTKPLVLSLHGWTGTGKSYVSSLLAHYLFQGGLRSPRVHHFSP 125
Query: 587 KKDF-DCYELEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLDTIIPML 742
F +E+ K+ L + + + C +SL +FDE+ M P +++ + P L
Sbjct: 126 VLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMPPGLMEVLRPFL 178
>AK092388-1|BAC03876.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ35069 fis, clone PLACE5000129. ).
Length = 136
Score = 49.2 bits (112), Expect = 2e-05
Identities = 28/83 (33%), Positives = 46/83 (55%)
Frame = +2
Query: 332 HIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKN 511
H P L L+Q + GQ L L ++ A K + + K LV+SLHGW+G GK+
Sbjct: 35 HHPPVALGLECDLAQHLAGQHLAKAL--VVKALKAFVRDP-APTKPLVLSLHGWTGTGKS 91
Query: 512 FASTMIAEAIYRKGMQSNYVKLF 580
+ S+++A +++ G++S V F
Sbjct: 92 YVSSLLAHYLFQGGLRSPRVHHF 114
>BX255925-5|CAM24150.1| 423|Homo sapiens novel protein (FLJ20245)
protein.
Length = 423
Score = 35.5 bits (78), Expect = 0.21
Identities = 18/64 (28%), Positives = 39/64 (60%)
Frame = +2
Query: 341 FDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFAS 520
+D+ L +L + +FGQP + I++ ++ + ++ + + L+++LHG SGVGK+
Sbjct: 148 YDLDGLEKALQRAVFGQPAA--VSRIVALMRDYL-ATHVHSRPLLLALHGPSGVGKSHVG 204
Query: 521 TMIA 532
++A
Sbjct: 205 RLLA 208
>AK000252-1|BAA91032.1| 423|Homo sapiens protein ( Homo sapiens
cDNA FLJ20245 fis, clone COLF6454. ).
Length = 423
Score = 35.5 bits (78), Expect = 0.21
Identities = 18/64 (28%), Positives = 39/64 (60%)
Frame = +2
Query: 341 FDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFAS 520
+D+ L +L + +FGQP + I++ ++ + ++ + + L+++LHG SGVGK+
Sbjct: 148 YDLDGLEKALQRAVFGQPAA--VSRIVALMRDYL-ATHVHSRPLLLALHGPSGVGKSHVG 204
Query: 521 TMIA 532
++A
Sbjct: 205 RLLA 208
>BC006404-1|AAH06404.1| 707|Homo sapiens ClpB caseinolytic
peptidase B homolog (E. coli) protein.
Length = 707
Score = 33.5 bits (73), Expect = 0.85
Identities = 32/144 (22%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Frame = +2
Query: 356 LRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAE 535
L L + + GQ + + + +A + N + LV G SG+GK + A+
Sbjct: 339 LEQRLKEHIIGQE--SAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAK 396
Query: 536 AIYRKGMQSNYVKLFMGKKDFDCYELEK---KKQMLVN-----TLNTLVKKCPKSLIIFD 691
++ K + +++L M + + +E+ K V L +K+CP ++++FD
Sbjct: 397 YMH-KDAKKGFIRLDMSEFQ-ERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFD 454
Query: 692 EIHHMCPSVLDTIIPMLDHHSAVD 763
E+ P VL ++ + D D
Sbjct: 455 EVDKAHPDVLTIMLQLFDEGRLTD 478
>AK023214-1|BAB14467.1| 677|Homo sapiens protein ( Homo sapiens
cDNA FLJ13152 fis, clone NT2RP3003385, highly similar to
Mus musculus SKD3 mRNA. ).
Length = 677
Score = 33.5 bits (73), Expect = 0.85
Identities = 32/144 (22%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Frame = +2
Query: 356 LRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAE 535
L L + + GQ + + + +A + N + LV G SG+GK + A+
Sbjct: 309 LEQRLKEHIIGQE--SAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAK 366
Query: 536 AIYRKGMQSNYVKLFMGKKDFDCYELEK---KKQMLVN-----TLNTLVKKCPKSLIIFD 691
++ K + +++L M + + +E+ K V L +K+CP ++++FD
Sbjct: 367 YMH-KDAKKGFIRLDMSEFQ-ERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFD 424
Query: 692 EIHHMCPSVLDTIIPMLDHHSAVD 763
E+ P VL ++ + D D
Sbjct: 425 EVDKAHPDVLTIMLQLFDEGRLTD 448
>AL139132-6|CAH70927.1| 153|Homo sapiens torsin family 3, member A
protein.
Length = 153
Score = 33.1 bits (72), Expect = 1.1
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2
Query: 503 GKNFASTMIAEAIYRKGMQSNYVKLFM 583
GKNF + M+ E +YR G+ S+ V++F+
Sbjct: 125 GKNFVARMLVENLYRDGLMSDCVRMFI 151
>BC006257-1|AAH06257.1| 315|Homo sapiens CLPB protein protein.
Length = 315
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 644 LNTLVKKCPKSLIIFDEIHHMCPSVLDTIIPMLDHHSAVD 763
L +K+CP ++++FDE+ P VL ++ + D D
Sbjct: 47 LTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTD 86
>AL834484-1|CAD39142.1| 322|Homo sapiens hypothetical protein
protein.
Length = 322
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 644 LNTLVKKCPKSLIIFDEIHHMCPSVLDTIIPMLDHHSAVD 763
L +K+CP ++++FDE+ P VL ++ + D D
Sbjct: 54 LTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTD 93
>BC005038-1|AAH05038.1| 789|Homo sapiens CHD1L protein protein.
Length = 789
Score = 30.3 bits (65), Expect = 7.9
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 554 MQSNYVKLFMGKKDFDCYELEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLDTII 733
+Q Y K + KD D +E E K++ + + + ++KC +FD M + DT+I
Sbjct: 271 LQKKYYKAIL-MKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGGVGMNLTAADTVI 329
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,952,318
Number of Sequences: 237096
Number of extensions: 2141457
Number of successful extensions: 4223
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 3928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4196
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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