Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30b13
(769 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70034-14|CAC44294.1| 356|Caenorhabditis elegans Hypothetical p... 110 9e-25
Z70034-13|CAC44293.1| 350|Caenorhabditis elegans Hypothetical p... 110 9e-25
Z49910-11|CAC44292.1| 356|Caenorhabditis elegans Hypothetical p... 110 9e-25
Z49910-10|CAC44291.1| 350|Caenorhabditis elegans Hypothetical p... 110 9e-25
AL023835-12|CAA19484.1| 412|Caenorhabditis elegans Hypothetical... 84 9e-17
AL023835-11|CAA19495.1| 335|Caenorhabditis elegans Hypothetical... 84 1e-16
Z92972-4|CAB07489.2| 337|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z78413-8|CAB01665.2| 541|Caenorhabditis elegans Hypothetical pr... 31 1.2
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 30 1.6
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 30 1.6
Z74042-10|CAA98524.1| 307|Caenorhabditis elegans Hypothetical p... 29 2.8
Z72504-1|CAA96603.2| 1193|Caenorhabditis elegans Hypothetical pr... 29 2.8
EF535106-1|ABQ15208.1| 1206|Caenorhabditis elegans transient rec... 29 2.8
U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain, un... 29 3.6
AY305844-1|AAR11988.1| 423|Caenorhabditis elegans nuclear recep... 29 4.8
AF273828-1|AAG15177.1| 422|Caenorhabditis elegans nuclear recep... 29 4.8
AF273827-1|AAG15176.1| 421|Caenorhabditis elegans nuclear recep... 29 4.8
AF273826-1|AAG15175.1| 419|Caenorhabditis elegans nuclear recep... 29 4.8
AC024771-7|AAK70663.4| 407|Caenorhabditis elegans Nuclear hormo... 29 4.8
AC006680-2|AAK72302.1| 309|Caenorhabditis elegans Serpentine re... 29 4.8
Z82071-2|CAB04918.2| 362|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trn... 28 6.4
AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trn... 28 6.4
>Z70034-14|CAC44294.1| 356|Caenorhabditis elegans Hypothetical
protein C18E9.11b protein.
Length = 356
Score = 110 bits (265), Expect = 9e-25
Identities = 68/204 (33%), Positives = 115/204 (56%), Gaps = 4/204 (1%)
Frame = +2
Query: 170 LIGIYLIMFLSSTLSEPIT--ISLVGSAIVLASGWYKWDTLKDATYCKFTECCNDYHIPF 343
L+ ++ + F+++ L IT I G+ I +++G + W LKD C ECC++ + F
Sbjct: 7 LLLLFHLCFVNTELISVITGKIKDSGTTIAISAGAF-WG-LKDRLKCYLYECCHEPDVNF 64
Query: 344 DVQKLRDSLSQRMFGQPLVNELF-NIISAHKENINESNGNKKALVISLHGWSGVGKNFAS 520
+ L ++ +FGQ LV ++ N I +H N N +K LV+S HG++G GKN+ +
Sbjct: 65 NYHTLDADIANLLFGQHLVKDVVVNSIKSHWYNENP----RKPLVLSFHGYTGSGKNYVA 120
Query: 521 TMIAEAIYRKGMQSNYVKLFMGKKDF-DCYELEKKKQMLVNTLNTLVKKCPKSLIIFDEI 697
+IA +R G++S +V+ + DF D +LE+ + L N + T V+KC +S+ IFDE
Sbjct: 121 EIIANNTFRLGLRSTFVQHIVATNDFPDKNKLEEYQVELRNRILTTVQKCQRSIFIFDEA 180
Query: 698 HHMCPSVLDTIIPMLDHHSAVDEV 769
+ +L I P LD++S + V
Sbjct: 181 DKLPEQLLGAIKPFLDYYSTISGV 204
>Z70034-13|CAC44293.1| 350|Caenorhabditis elegans Hypothetical
protein C18E9.11a protein.
Length = 350
Score = 110 bits (265), Expect = 9e-25
Identities = 64/199 (32%), Positives = 111/199 (55%), Gaps = 2/199 (1%)
Frame = +2
Query: 179 IYLIMFLSSTLSEPITISLVGSAIVLASGWYKWDTLKDATYCKFTECCNDYHIPFDVQKL 358
+ L++F ++ + + G+ I +++G + W LKD C ECC++ + F+ L
Sbjct: 6 VLLLLFHLCFVNTELISVITGTTIAISAGAF-WG-LKDRLKCYLYECCHEPDVNFNYHTL 63
Query: 359 RDSLSQRMFGQPLVNELF-NIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAE 535
++ +FGQ LV ++ N I +H N N +K LV+S HG++G GKN+ + +IA
Sbjct: 64 DADIANLLFGQHLVKDVVVNSIKSHWYNENP----RKPLVLSFHGYTGSGKNYVAEIIAN 119
Query: 536 AIYRKGMQSNYVKLFMGKKDF-DCYELEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCP 712
+R G++S +V+ + DF D +LE+ + L N + T V+KC +S+ IFDE +
Sbjct: 120 NTFRLGLRSTFVQHIVATNDFPDKNKLEEYQVELRNRILTTVQKCQRSIFIFDEADKLPE 179
Query: 713 SVLDTIIPMLDHHSAVDEV 769
+L I P LD++S + V
Sbjct: 180 QLLGAIKPFLDYYSTISGV 198
>Z49910-11|CAC44292.1| 356|Caenorhabditis elegans Hypothetical
protein C18E9.11b protein.
Length = 356
Score = 110 bits (265), Expect = 9e-25
Identities = 68/204 (33%), Positives = 115/204 (56%), Gaps = 4/204 (1%)
Frame = +2
Query: 170 LIGIYLIMFLSSTLSEPIT--ISLVGSAIVLASGWYKWDTLKDATYCKFTECCNDYHIPF 343
L+ ++ + F+++ L IT I G+ I +++G + W LKD C ECC++ + F
Sbjct: 7 LLLLFHLCFVNTELISVITGKIKDSGTTIAISAGAF-WG-LKDRLKCYLYECCHEPDVNF 64
Query: 344 DVQKLRDSLSQRMFGQPLVNELF-NIISAHKENINESNGNKKALVISLHGWSGVGKNFAS 520
+ L ++ +FGQ LV ++ N I +H N N +K LV+S HG++G GKN+ +
Sbjct: 65 NYHTLDADIANLLFGQHLVKDVVVNSIKSHWYNENP----RKPLVLSFHGYTGSGKNYVA 120
Query: 521 TMIAEAIYRKGMQSNYVKLFMGKKDF-DCYELEKKKQMLVNTLNTLVKKCPKSLIIFDEI 697
+IA +R G++S +V+ + DF D +LE+ + L N + T V+KC +S+ IFDE
Sbjct: 121 EIIANNTFRLGLRSTFVQHIVATNDFPDKNKLEEYQVELRNRILTTVQKCQRSIFIFDEA 180
Query: 698 HHMCPSVLDTIIPMLDHHSAVDEV 769
+ +L I P LD++S + V
Sbjct: 181 DKLPEQLLGAIKPFLDYYSTISGV 204
>Z49910-10|CAC44291.1| 350|Caenorhabditis elegans Hypothetical
protein C18E9.11a protein.
Length = 350
Score = 110 bits (265), Expect = 9e-25
Identities = 64/199 (32%), Positives = 111/199 (55%), Gaps = 2/199 (1%)
Frame = +2
Query: 179 IYLIMFLSSTLSEPITISLVGSAIVLASGWYKWDTLKDATYCKFTECCNDYHIPFDVQKL 358
+ L++F ++ + + G+ I +++G + W LKD C ECC++ + F+ L
Sbjct: 6 VLLLLFHLCFVNTELISVITGTTIAISAGAF-WG-LKDRLKCYLYECCHEPDVNFNYHTL 63
Query: 359 RDSLSQRMFGQPLVNELF-NIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAE 535
++ +FGQ LV ++ N I +H N N +K LV+S HG++G GKN+ + +IA
Sbjct: 64 DADIANLLFGQHLVKDVVVNSIKSHWYNENP----RKPLVLSFHGYTGSGKNYVAEIIAN 119
Query: 536 AIYRKGMQSNYVKLFMGKKDF-DCYELEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCP 712
+R G++S +V+ + DF D +LE+ + L N + T V+KC +S+ IFDE +
Sbjct: 120 NTFRLGLRSTFVQHIVATNDFPDKNKLEEYQVELRNRILTTVQKCQRSIFIFDEADKLPE 179
Query: 713 SVLDTIIPMLDHHSAVDEV 769
+L I P LD++S + V
Sbjct: 180 QLLGAIKPFLDYYSTISGV 198
>AL023835-12|CAA19484.1| 412|Caenorhabditis elegans Hypothetical
protein Y37A1B.13 protein.
Length = 412
Score = 84.2 bits (199), Expect = 9e-17
Identities = 48/154 (31%), Positives = 82/154 (53%), Gaps = 1/154 (0%)
Frame = +2
Query: 302 CKFTECCNDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVIS 481
C F CC + I F+ L ++FGQ L+ E +++ + K + + + ++K LV+S
Sbjct: 107 CLFYTCCGETDI-FNYHALYKDFDNKIFGQHLMAE--SVVHSIKSHWHNEH-SQKPLVLS 162
Query: 482 LHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLNTLV 658
HG +G GKN+ + +I YR GM S +V F+ +F + +E K L + L
Sbjct: 163 FHGGTGTGKNYVTEIIVNNTYRSGMHSPFVNYFVATNNFPNKKYIEDYKLELKDQLIRSA 222
Query: 659 KKCPKSLIIFDEIHHMCPSVLDTIIPMLDHHSAV 760
++C +S+ IFDE + ++ I P LD++ AV
Sbjct: 223 RRCQRSIFIFDETDKLQSELIQVIKPFLDYYPAV 256
>AL023835-11|CAA19495.1| 335|Caenorhabditis elegans Hypothetical
protein Y37A1B.12 protein.
Length = 335
Score = 83.8 bits (198), Expect = 1e-16
Identities = 51/141 (36%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Frame = +2
Query: 353 KLRDSLSQRMFGQPLV-NELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMI 529
+L LS+ ++GQ LV + + I +H N + +K LV+S HG G GKN+ + +I
Sbjct: 46 ELHRDLSRFIYGQHLVIDTVVRSIKSHWHNEHP----QKPLVLSFHGGPGTGKNYVTEII 101
Query: 530 AEAIYRKGMQSNYVKLFMGKKDF-DCYELEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHM 706
A+ +R G+QS YVK F+ KDF + +E K L L C +S+ +FDE+ +
Sbjct: 102 AKNTFRSGLQSPYVKYFVATKDFPNNKHIEDYKLKLKEQLIQSADGCDRSIFVFDEVDKL 161
Query: 707 CPSVLDTIIPMLDHHSAVDEV 769
++ TI P LD + AV EV
Sbjct: 162 QSELVQTIKPFLDFYPAVFEV 182
>Z92972-4|CAB07489.2| 337|Caenorhabditis elegans Hypothetical
protein T19C9.4 protein.
Length = 337
Score = 31.5 bits (68), Expect = 0.68
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 306 NLQNVVMIITYLLMYKN*EILFHSECLVSH-WSMNFSILSQLTKR 437
N N+ +I +LL+ I+FH CLV + + S LSQ TKR
Sbjct: 204 NPSNMFLIFAFLLLQATGNIIFHVACLVYYLYVAPPSTLSQATKR 248
>Z78413-8|CAB01665.2| 541|Caenorhabditis elegans Hypothetical
protein T01C3.8 protein.
Length = 541
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/78 (29%), Positives = 35/78 (44%)
Frame = +2
Query: 200 SSTLSEPITISLVGSAIVLASGWYKWDTLKDATYCKFTECCNDYHIPFDVQKLRDSLSQR 379
S T S IT L+ +I G+ W TL+DA YC N H+ F + +
Sbjct: 58 SETGSLQITRKLMKFSISGRRGYSPWRTLQDALYCSLGRFHNGEHL-FCIHS--GPNHEF 114
Query: 380 MFGQPLVNELFNIISAHK 433
+GQP+++ + S K
Sbjct: 115 YYGQPILHSIDRFRSHRK 132
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 494 SGVGKNFASTMIAEAIYRKGMQSNYVKLFMGKKDFDCYELEKKKQMLVNTLN 649
+GV K + + AI + +QS K+ DCY LE+KK++L + L+
Sbjct: 182 NGVHKELTAKAASLAIQNEKLQSEVTKV-----QSDCYNLERKKRILTDKLS 228
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 494 SGVGKNFASTMIAEAIYRKGMQSNYVKLFMGKKDFDCYELEKKKQMLVNTLN 649
+GV K + + AI + +QS K+ DCY LE+KK++L + L+
Sbjct: 182 NGVHKELTAKAASLAIQNEKLQSEVTKV-----QSDCYNLERKKRILTDKLS 228
>Z74042-10|CAA98524.1| 307|Caenorhabditis elegans Hypothetical
protein T11F9.11 protein.
Length = 307
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = +2
Query: 431 KENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMGKKDFDCYE 610
K + ++ G V+ L + + K T EA+ + N + GKK FDC +
Sbjct: 80 KNQVVKAGGKASTFVVDLSQYKDIHKVAKETK--EAVGDIDILINNAGIVTGKKLFDCPD 137
Query: 611 LEKKKQMLVNT 643
+K M VNT
Sbjct: 138 ELMEKTMAVNT 148
>Z72504-1|CAA96603.2| 1193|Caenorhabditis elegans Hypothetical protein
C29E6.2 protein.
Length = 1193
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -1
Query: 727 CIKH*WTHVMYLIKDNQRFGTFLHQSVQCIN*HLFFLFQFIAIEIFFTHK*FYIV 563
CI W +++++I+ RFG F+ V + F F+ I F+ FY++
Sbjct: 923 CIFFGWINLLFMIRKMPRFGIFVVMFVDIVKTFFRFFPVFVLFIIAFSSS-FYVI 976
>EF535106-1|ABQ15208.1| 1206|Caenorhabditis elegans transient receptor
potential subfamilyA-1 protein.
Length = 1206
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -1
Query: 727 CIKH*WTHVMYLIKDNQRFGTFLHQSVQCIN*HLFFLFQFIAIEIFFTHK*FYIV 563
CI W +++++I+ RFG F+ V + F F+ I F+ FY++
Sbjct: 936 CIFFGWINLLFMIRKMPRFGIFVVMFVDIVKTFFRFFPVFVLFIIAFSSS-FYVI 989
>U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 6 protein.
Length = 2098
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +2
Query: 452 NGNKKALVISLHGWSGVGKNFASTMIAEAIYRKGMQSNYVKLFMGKKDFDCYELEKK--K 625
N NK+ V+ + +NFA + R G Q + + L + +C+ ++
Sbjct: 1571 NNNKQVTVVDYNAEPYTLENFAEDNFNSQVKRVGSQISLMTLRKKESQIECWRFSREHID 1630
Query: 626 QMLVNTLNTLVKKCPKSLIIFDEI 697
Q L+ LN C ++ IF I
Sbjct: 1631 QPLLKKLNGREDACRGAIEIFAAI 1654
>AY305844-1|AAR11988.1| 423|Caenorhabditis elegans nuclear receptor
NHR-86 protein.
Length = 423
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +2
Query: 302 CKFTECCNDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVIS 481
C+F +C P VQ+ RD++ +R +P +L ++ + + + + ALV
Sbjct: 95 CRFAKCLEVGMNPAGVQQRRDTIGKREI-KPDSTDLMQLLGSVGDGYPPTTSAQSALVED 153
Query: 482 LH 487
LH
Sbjct: 154 LH 155
>AF273828-1|AAG15177.1| 422|Caenorhabditis elegans nuclear receptor
NHR-86 protein.
Length = 422
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +2
Query: 302 CKFTECCNDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVIS 481
C+F +C P VQ+ RD++ +R +P +L ++ + + + + ALV
Sbjct: 94 CRFAKCLEVGMNPAGVQQRRDTIGKREI-KPDSTDLMQLLGSVGDGYPPTTSAQSALVED 152
Query: 482 LH 487
LH
Sbjct: 153 LH 154
>AF273827-1|AAG15176.1| 421|Caenorhabditis elegans nuclear receptor
NHR-86 protein.
Length = 421
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +2
Query: 302 CKFTECCNDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVIS 481
C+F +C P VQ+ RD++ +R +P +L ++ + + + + ALV
Sbjct: 93 CRFAKCLEVGMNPAGVQQRRDTIGKREI-KPDSTDLMQLLGSVGDGYPPTTSAQSALVED 151
Query: 482 LH 487
LH
Sbjct: 152 LH 153
>AF273826-1|AAG15175.1| 419|Caenorhabditis elegans nuclear receptor
NHR-86 protein.
Length = 419
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +2
Query: 302 CKFTECCNDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVIS 481
C+F +C P VQ+ RD++ +R +P +L ++ + + + + ALV
Sbjct: 91 CRFAKCLEVGMNPAGVQQRRDTIGKREI-KPDSTDLMQLLGSVGDGYPPTTSAQSALVED 149
Query: 482 LH 487
LH
Sbjct: 150 LH 151
>AC024771-7|AAK70663.4| 407|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 86 protein.
Length = 407
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +2
Query: 302 CKFTECCNDYHIPFDVQKLRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVIS 481
C+F +C P VQ+ RD++ +R +P +L ++ + + + + ALV
Sbjct: 79 CRFAKCLEVGMNPAGVQQRRDTIGKREI-KPDSTDLMQLLGSVGDGYPPTTSAQSALVED 137
Query: 482 LH 487
LH
Sbjct: 138 LH 139
>AC006680-2|AAK72302.1| 309|Caenorhabditis elegans Serpentine
receptor, class x protein9 protein.
Length = 309
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +1
Query: 1 VTENSISTCIDYTLIIFEKYMYNCTCVCTIGTYGTVRN*NKKI 129
VT N + + + ++++ + + C IG + ++RN NKK+
Sbjct: 164 VTINGVHSYTNSMFLVYDSICTSISIFCYIGVFISIRNSNKKV 206
>Z82071-2|CAB04918.2| 362|Caenorhabditis elegans Hypothetical
protein W05B5.2 protein.
Length = 362
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 176 GIYLI-MFLSSTLSEPITISLVGSAIVLASGWYKWDT 283
GI+ I MFLSS EP+T+ L G+ V + KW T
Sbjct: 165 GIWFIAMFLSSP--EPVTLHLAGAPFVRPNFTTKWGT 199
>AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform a protein.
Length = 909
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 13 SISTCIDYTLIIFEKYMYNCTCVCTIGTYGTVRN*NK-KIMLSKSNNHNGSKIFNWN 180
S+ TC+ +++ + +GT R+ N +++L S N N +++F WN
Sbjct: 86 SLFTCLHSLVLLLHSSKTTAFLGVFVRKFGTTRSKNLVRVLLFASFNRNQTQLFAWN 142
>AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform b protein.
Length = 908
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 13 SISTCIDYTLIIFEKYMYNCTCVCTIGTYGTVRN*NK-KIMLSKSNNHNGSKIFNWN 180
S+ TC+ +++ + +GT R+ N +++L S N N +++F WN
Sbjct: 86 SLFTCLHSLVLLLHSSKTTAFLGVFVRKFGTTRSKNLVRVLLFASFNRNQTQLFAWN 142
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,898,806
Number of Sequences: 27780
Number of extensions: 381329
Number of successful extensions: 902
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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