Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30b08
         (692 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1575 - 27848977-27849095,27849254-27849302,27850270-278502...    31   1.1  
11_02_0033 + 7574845-7575004,7575370-7575429,7575582-7575623,757...    29   4.6  
08_01_0596 + 5253920-5254037,5254229-5254785                           29   4.6  
08_01_0594 + 5248020-5248137,5248330-5248886                           29   4.6  
08_01_0592 + 5242446-5242563,5242754-5243310                           29   4.6  
08_01_0591 + 5236254-5236374,5236553-5237109                           29   4.6  
08_01_0589 + 5227520-5227637,5227819-5228375                           29   4.6  
08_02_0298 - 15477119-15477724,15478105-15478333,15478368-154784...    28   8.1  

>07_03_1575 - 27848977-27849095,27849254-27849302,27850270-27850287,
            27850798-27851786,27852119-27852733,27852893-27852921,
            27853990-27854453,27854530-27854654,27854743-27855025,
            27855112-27856102,27856965-27857576,27857666-27858630
          Length = 1752

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/59 (28%), Positives = 32/59 (54%)
 Frame = -3

Query: 630  SFKGLISWGSSSK*EKSVGIRADSQDALPPVPRSHNYF*FKLNITKRDTESRGYFREVI 454
            S KGLI    + K ++S+ ++  ++    PVP  H+      NI+K ++ S+GY  + +
Sbjct: 1652 SDKGLIIASENGKIKESIPLQTKNKPEENPVPADHDIDLQCTNISKVNSGSQGYINDQV 1710


>11_02_0033 +
           7574845-7575004,7575370-7575429,7575582-7575623,
           7576192-7576363,7577881-7577991,7578042-7578132
          Length = 211

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = +2

Query: 362 IDELLNESKEAIRQTNEFLEKWR 430
           +DEL+  +K+ +R T++ +EKWR
Sbjct: 189 VDELVVNTKKLVRATSKEIEKWR 211


>08_01_0596 + 5253920-5254037,5254229-5254785
          Length = 224

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -1

Query: 521 TFNSN*TLLSVILNRGDIFV 462
           T N N TL S +LN+GD+FV
Sbjct: 131 TSNPNNTLFSKVLNKGDVFV 150


>08_01_0594 + 5248020-5248137,5248330-5248886
          Length = 224

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -1

Query: 521 TFNSN*TLLSVILNRGDIFV 462
           T N N TL S +LN+GD+FV
Sbjct: 131 TSNPNNTLFSKVLNKGDVFV 150


>08_01_0592 + 5242446-5242563,5242754-5243310
          Length = 224

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -1

Query: 521 TFNSN*TLLSVILNRGDIFV 462
           T N N TL S +LN+GD+FV
Sbjct: 131 TSNPNNTLFSKVLNKGDVFV 150


>08_01_0591 + 5236254-5236374,5236553-5237109
          Length = 225

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -1

Query: 521 TFNSN*TLLSVILNRGDIFV 462
           T N N TL S +LN+GD+FV
Sbjct: 132 TSNPNNTLFSKVLNKGDVFV 151


>08_01_0589 + 5227520-5227637,5227819-5228375
          Length = 224

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -1

Query: 521 TFNSN*TLLSVILNRGDIFV 462
           T N N TL S +LN+GD+FV
Sbjct: 131 TSNPNNTLFSKVLNKGDVFV 150


>08_02_0298 -
           15477119-15477724,15478105-15478333,15478368-15478498,
           15478556-15478891
          Length = 433

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -1

Query: 257 CQPIAFFSPPLAMFSSRNKLSCRISFGTYQRNHCLTNNRPGINLKRRKC 111
           C  I   S  +A+ + ++K SC   F  + RNH LT     + L+  KC
Sbjct: 350 CLRIMKLSCQVAILAIQHKPSCAKDFNEHDRNHVLTKASENL-LELDKC 397


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,896,642
Number of Sequences: 37544
Number of extensions: 347804
Number of successful extensions: 834
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)