Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30b07
(693 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3H7.15 |hhp1||serine/threonine protein kinase Hhp1|Schizosac... 201 9e-53
SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2 |Schizos... 180 2e-46
SPAC1805.05 |cki3||serine/threonine protein kinase Cki3|Schizosa... 143 2e-35
SPBP35G2.05c |cki2||serine/threonine protein kinase Cki2|Schizos... 138 7e-34
SPBC1347.06c |cki1||serine/threonine protein kinase Cki1|Schizos... 132 6e-32
SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase Byr2... 39 6e-04
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 38 0.001
SPBC8D2.19 |mde3||serine/threonine protein kinase Mde3|Schizosac... 37 0.002
SPCC74.03c |ssp2|ucp9|serine/threonine protein kinase Ssp2|Schiz... 37 0.003
SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces po... 36 0.004
SPCC297.03 |ssp1||serine/threonine protein kinase Ssp1 |Schizosa... 35 0.010
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 34 0.017
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 33 0.030
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 33 0.030
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 33 0.039
SPAC23H4.02 |ppk9||serine/threonine protein kinase Ppk9 |Schizos... 33 0.052
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos... 33 0.052
SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc... 33 0.052
SPAC23A1.06c |cmk2|mkp2|MAPK-activated protein kinase Cmk2|Schiz... 32 0.090
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 32 0.090
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 31 0.12
SPAC821.12 |orb6||serine/threonine protein kinase Orb6|Schizosac... 31 0.16
SPCC320.13c |ark1|aim1, SPCC330.16|aurora-B kinase Ark1|Schizosa... 31 0.16
SPAC2C4.14c |ppk11||PAK-related kinase Ppk11|Schizosaccharomyces... 31 0.21
SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase Nak1|Schizosacch... 31 0.21
SPBC19F8.07 |crk1|mop1, mcs6|cyclin-dependent kinase activating ... 30 0.36
SPAC1952.17c ||SPAC890.01c|GTPase activating protein|Schizosacch... 30 0.36
SPCC1322.08 |srk1|mkp1|MAPK-activated protein kinase Srk1|Schizo... 29 0.48
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 29 0.48
SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalyt... 29 0.64
SPCC162.10 |ppk33||serine/threonine protein kinase Ppk33 |Schizo... 29 0.64
SPCC576.15c |ksg1||serine/threonine protein kinase Ksg1|Schizosa... 29 0.64
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 29 0.84
SPBC577.12 |mug71||endoribonuclease |Schizosaccharomyces pombe|c... 29 0.84
SPBC1683.04 |||glycosyl hydrolase family 3|Schizosaccharomyces p... 29 0.84
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 29 0.84
SPBC119.16c |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.1
SPCC1919.01 |ppk34|SPCC830.12|serine/threonine protein kinase Pp... 28 1.1
SPBC1778.10c |ppk21|SPBC4C3.11|serine/threonine protein kinase P... 27 1.9
SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase... 27 1.9
SPAC637.09 |||ribonuclease H70 |Schizosaccharomyces pombe|chr 1|... 27 1.9
SPAC3H1.13 |ppk13||serine/threonine protein kinase Ppk13 |Schizo... 27 2.6
SPAC15F9.01c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 3.4
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 27 3.4
SPAC644.06c |cdr1|nim1|GIN4 family protein kinase Cdr1|Schizosac... 27 3.4
SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15 |Schizo... 27 3.4
SPAC17A5.11 |rec12|spo11|endonuclease Rec12|Schizosaccharomyces ... 26 5.9
SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomy... 25 7.9
>SPBC3H7.15 |hhp1||serine/threonine protein kinase
Hhp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 365
Score = 201 bits (490), Expect = 9e-53
Identities = 90/127 (70%), Positives = 110/127 (86%)
Frame = +2
Query: 311 MELRVGNKYRLGRKIGSGSFGDIYLGTNIVTREEVAIKLECIKTRHPQLHIESKFYKLMQ 490
++LR+GNKYR+GRKIGSGSFGDIYLGTN+V+ EEVAIKLE + +HPQL E + Y+++
Sbjct: 3 LDLRIGNKYRIGRKIGSGSFGDIYLGTNVVSGEEVAIKLESTRAKHPQLEYEYRVYRILS 62
Query: 491 GRVGIPAIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLISRIEDIH 670
G VGIP ++W G E DYN MVM+LLGPSLEDLFNFC+R+FSLKTVLLLADQLISRIE IH
Sbjct: 63 GGVGIPFVRWFGVECDYNAMVMDLLGPSLEDLFNFCNRKFSLKTVLLLADQLISRIEFIH 122
Query: 671 YRNFIHR 691
++F+HR
Sbjct: 123 SKSFLHR 129
>SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 400
Score = 180 bits (438), Expect = 2e-46
Identities = 79/127 (62%), Positives = 102/127 (80%)
Frame = +2
Query: 311 MELRVGNKYRLGRKIGSGSFGDIYLGTNIVTREEVAIKLECIKTRHPQLHIESKFYKLMQ 490
+++++GNKYR+GRKIGSGSFG IYLG N V E+VA+KLE +K RH QL E + Y +++
Sbjct: 4 VDIKIGNKYRIGRKIGSGSFGQIYLGLNTVNGEQVAVKLEPLKARHHQLEYEFRVYNILK 63
Query: 491 GRVGIPAIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLISRIEDIH 670
G +GIP I+W G YN MVM+LLGPSLEDLF +C R+F+LKTVLLLADQLISRIE +H
Sbjct: 64 GNIGIPTIRWFGVTNSYNAMVMDLLGPSLEDLFCYCGRKFTLKTVLLLADQLISRIEYVH 123
Query: 671 YRNFIHR 691
++F+HR
Sbjct: 124 SKSFLHR 130
>SPAC1805.05 |cki3||serine/threonine protein kinase
Cki3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 439
Score = 143 bits (347), Expect = 2e-35
Identities = 64/123 (52%), Positives = 91/123 (73%)
Frame = +2
Query: 323 VGNKYRLGRKIGSGSFGDIYLGTNIVTREEVAIKLECIKTRHPQLHIESKFYKLMQGRVG 502
VG YR+G+KIG GSFG ++ G N++ + +A+K E K+ PQL E YKL+ G G
Sbjct: 11 VGVHYRVGKKIGEGSFGMLFQGVNLINNQPIALKFESRKSEVPQLRDEYLTYKLLMGLPG 70
Query: 503 IPAIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLISRIEDIHYRNF 682
IP++ + G EG YN++VM+LLGPSLEDLF++C RRFS KTV ++A Q+I+RI+ +H R+F
Sbjct: 71 IPSVYYYGQEGMYNLLVMDLLGPSLEDLFDYCGRRFSPKTVAMIAKQMITRIQSVHERHF 130
Query: 683 IHR 691
I+R
Sbjct: 131 IYR 133
>SPBP35G2.05c |cki2||serine/threonine protein kinase
Cki2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 138 bits (334), Expect = 7e-34
Identities = 63/123 (51%), Positives = 89/123 (72%)
Frame = +2
Query: 323 VGNKYRLGRKIGSGSFGDIYLGTNIVTREEVAIKLECIKTRHPQLHIESKFYKLMQGRVG 502
VG YR+GRKIG GSFG I+ G N++ + +AIK E K+ PQL E + YKL+ G G
Sbjct: 8 VGVHYRVGRKIGEGSFGVIFDGMNLLNNQLIAIKFEPKKSEAPQLRDEYRTYKLLVGNAG 67
Query: 503 IPAIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLISRIEDIHYRNF 682
IP + + G EG +N++V++LLGPSLEDLF +C RRFS+KTV + A Q++SR++ IH +N
Sbjct: 68 IPNVYYFGQEGLHNILVIDLLGPSLEDLFEWCGRRFSVKTVAMTAKQMLSRVQTIHEKNL 127
Query: 683 IHR 691
++R
Sbjct: 128 VYR 130
>SPBC1347.06c |cki1||serine/threonine protein kinase
Cki1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 132 bits (318), Expect = 6e-32
Identities = 58/123 (47%), Positives = 90/123 (73%)
Frame = +2
Query: 323 VGNKYRLGRKIGSGSFGDIYLGTNIVTREEVAIKLECIKTRHPQLHIESKFYKLMQGRVG 502
VG Y++GR+IG GSFG I+ GTN++ ++VAIK E ++ PQL E + YKL+ G G
Sbjct: 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTG 67
Query: 503 IPAIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLISRIEDIHYRNF 682
IP + + G EG +N++V++LLGPSLEDL + C R+FS+KTV + A Q+++R++ IH ++
Sbjct: 68 IPNVYYFGQEGLHNILVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL 127
Query: 683 IHR 691
++R
Sbjct: 128 VYR 130
>SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase
Byr2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 659
Score = 39.1 bits (87), Expect = 6e-04
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Frame = +2
Query: 332 KYRLGRKIGSGSFGDIYLGTNIVTREEVAIKLECIKTRHPQLHIESKFYKLMQGRVGI-- 505
K+ G IGSGSFG +YLG N + E +A+K + + +K + G + +
Sbjct: 393 KWIRGALIGSGSFGQVYLGMNASSGELMAVKQVILDSVSESKDRHAKLLDALAGEIALLQ 452
Query: 506 -----PAIKWCGS--EGDY-NVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLISRIE 661
+++ GS D+ N+ + + G S+ L F V Q + +E
Sbjct: 453 ELSHEHIVQYLGSNLNSDHLNIFLEYVPGGSVAGLLTMYG-SFEETLVKNFIKQTLKGLE 511
Query: 662 DIHYRNFIHR 691
+H R +HR
Sbjct: 512 YLHSRGIVHR 521
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 38.3 bits (85), Expect = 0.001
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Frame = +2
Query: 335 YRLGRKIGSGSFGDIYLGTNIVTREEVAIKLECIKTRHPQLHIESKFYKLMQGRVGIPAI 514
YR+ +G GSFG +YL +++T +V +K C K +L+ +
Sbjct: 31 YRIESVVGEGSFGKVYLAAHLLTNTKVVLKSSCRKQAIILAREIHHHRRLLHPNITRLYE 90
Query: 515 KWCGSEGDYNVMVMELLGPSLEDLFNFCSR--RFSLKTVLLLADQLISRIEDIHYRNFIH 688
C + Y + ME P+ E L+++ +R R KT + QL I+ +H + +H
Sbjct: 91 VVCTEDRIY--LAMEYC-PNGE-LYDWVAREKRLDEKTTCRIMWQLCCAIQYLHRQGCVH 146
Query: 689 R 691
R
Sbjct: 147 R 147
>SPBC8D2.19 |mde3||serine/threonine protein kinase
Mde3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 559
Score = 37.1 bits (82), Expect = 0.002
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 10/131 (7%)
Frame = +2
Query: 329 NKYRLGRKIGSGSFGDIYLGTNIVTR---EEVAIK----LECIKTRHPQLHIESK--FYK 481
++Y + +K+G GSFG +YL E VA+K K +H L + K
Sbjct: 19 DRYLVKQKLGDGSFGTVYLAQRKEKNGLYETVAVKKLKNSSKPKPKHELLKLRESLALRK 78
Query: 482 LMQGRVGIPAIKWCGSEGDYNVMVMELLGPSLEDLF-NFCSRRFSLKTVLLLADQLISRI 658
+ + I ++ +VME + +L LF R F+ +T + Q+IS I
Sbjct: 79 ISKHPCLIDLLETFMDPYRNIFLVMEFMDCNLFQLFKRRQGRLFTKETAFNILLQIISGI 138
Query: 659 EDIHYRNFIHR 691
E IH F+HR
Sbjct: 139 EHIHKHGFMHR 149
>SPCC74.03c |ssp2|ucp9|serine/threonine protein kinase
Ssp2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 576
Score = 36.7 bits (81), Expect = 0.003
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Frame = +2
Query: 335 YRLGRKIGSGSFGDIYLGTNIVTREEVAIKL---ECIK--TRHPQLHIESKFYKLMQGRV 499
Y + +G GSFG + L T+ T+++VA+K + +K H ++ E + KL++
Sbjct: 34 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 93
Query: 500 GIPAIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLISRIEDIHYRN 679
I + D VMV+E G L D + +R + Q+I IE H
Sbjct: 94 IIKLYDVITTPTDI-VMVIEYAGGELFD-YIVEKKRMTEDEGRRFFQQIICAIEYCHRHK 151
Query: 680 FIHR 691
+HR
Sbjct: 152 IVHR 155
>SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 471
Score = 36.3 bits (80), Expect = 0.004
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Frame = +2
Query: 329 NKYRLGRKIGSGSFGDIYLGTNIVTREEVAIKLECIKTRHPQL-HIESKFYKLMQ-GRVG 502
N Y L RK+GSGSFG ++ V+ + +AIK ++T + IE + + L
Sbjct: 7 NSYTLLRKLGSGSFGVVWKARENVSGDIIAIKQIDLETGIDDITDIEQEVFMLSNCNSSN 66
Query: 503 IPAIKWCGSEGDYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLISRIEDIHYRN 679
+ C +G ++ME + G S+ L R + + + ++ +++ + +H +N
Sbjct: 67 VIQYYGCFVDGYTLWILMEHMDGGSVSGLLKM--GRLNEQVISIILREVLYGLNYLHGQN 124
Query: 680 FIHR 691
IHR
Sbjct: 125 KIHR 128
>SPCC297.03 |ssp1||serine/threonine protein kinase Ssp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 652
Score = 35.1 bits (77), Expect = 0.010
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +2
Query: 329 NKYRLGRKIGSGSFGDIYLGTNIVTREEVAIKLECIKTRHPQL 457
N Y + +++G G G + LG + VTRE +AIK+ R P+L
Sbjct: 133 NHYEIIKELGRGMHGKVKLGRDTVTRELLAIKIIPKTERRPKL 175
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 34.3 bits (75), Expect = 0.017
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = +2
Query: 332 KYRLGRKIGSGSFGDIYLGTNIVTREEVAIKL----ECIKTRHPQL 457
K+ G IG+G++G ++L NI T E +A+K + I RH QL
Sbjct: 824 KWMKGELIGNGTYGKVFLAMNINTGELIAVKQVEIPQTINGRHDQL 869
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 33.5 bits (73), Expect = 0.030
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +2
Query: 323 VGNKYRLGRKIGSGSFGDIYLGTNIVTREEVAIKLECIKTRHPQL 457
+GN Y LG+ IG+GS G + + ++ T E+ AIK+ + HP +
Sbjct: 122 IGN-YVLGKTIGAGSMGKVKVAHHLKTGEQFAIKI--VTRLHPDI 163
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 33.5 bits (73), Expect = 0.030
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
Frame = +2
Query: 350 KIGSGSFGDIYLGTNIVTREEVAIK---LECIKTRHPQLHI-ESKFYKLMQGRVGIPAIK 517
+IG G++G +Y N VT + VA+K LE K P + E K + ++ + I +
Sbjct: 282 QIGEGTYGKVYKAINTVTGDLVALKRIRLEQEKDGFPITTVREVKILQRLRHK-NIVRLL 340
Query: 518 WCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLISRIEDIHYRNFIHR 691
E MV E + L + F+ + L+ Q+ + +H+R +HR
Sbjct: 341 EIMVEKSSVYMVFEYMDHDLTGVLLNSQLHFTPGNIKHLSKQIFEALAYLHHRGVLHR 398
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 33.1 bits (72), Expect = 0.039
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 317 LRVGNKYRLGRKIGSGSFGDIYLG-TNIVTREEVAIK 424
+ + Y + RK+G G+FG +YL T ++E VAIK
Sbjct: 30 ISIDEVYNVVRKVGDGTFGSVYLATTKTPSKEVVAIK 66
>SPAC23H4.02 |ppk9||serine/threonine protein kinase Ppk9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 532
Score = 32.7 bits (71), Expect = 0.052
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +2
Query: 296 SANIKMELRVGNKY----RLGRKIGSGSFGDIYLGTNIVTREEVAIKL 427
SA+ + E GN Y LGR +G G+ + LG + T E+VA+K+
Sbjct: 6 SASAESEKDSGNTYVGPWLLGRTLGQGNLAKVKLGKHFQTNEKVALKM 53
>SPCC1450.11c |cek1||serine/threonine protein kinase
Cek1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1338
Score = 32.7 bits (71), Expect = 0.052
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 6/127 (4%)
Frame = +2
Query: 329 NKYRLGRKIGSGSFGDIYLGTNIVTREEVAIKL---ECIKTRHPQLHIESKFYKLM-QGR 496
N Y++ + I G+FG +YL T + AIK+ + ++ +++ ++ LM QG
Sbjct: 587 NDYKILKPISKGAFGSVYLAQKRTTGDYFAIKILKKSNMIAKNQVINVRAERAILMSQGE 646
Query: 497 VGIPA-IKWCGSEGDYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLISRIEDIH 670
A + + DY +VME L G L L + + + + D+H
Sbjct: 647 SPFVAKLYYTFQSKDYLYLVMEYLNGGDCGSLLKTMG-VLDLDWIRTYIAETVLCLGDLH 705
Query: 671 YRNFIHR 691
R IHR
Sbjct: 706 DRGIIHR 712
>SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase
Cdc7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1062
Score = 32.7 bits (71), Expect = 0.052
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Frame = +2
Query: 341 LGRKIGSGSFGDIYLGTNIVTREEVAI-KLECIKTRHPQLHIESKFYKLMQGRVGIPAIK 517
LG +G G+FG +Y G NI E VA+ K++ K L + L++ +K
Sbjct: 11 LGDCLGKGAFGAVYRGLNIKNGETVAVKKVKLSKMLKSDLSVIKMEIDLLKNLDHPNIVK 70
Query: 518 WCGSEGDYNVMVMELLGPSLEDLFNFCSR--RFSLKTVLLLADQLISRIEDIHYRNFIHR 691
+ GS + + + L L + C + V L Q++ + +H + IHR
Sbjct: 71 YRGSYQTNDSLCIILEYCENGSLRSICKNFGKIPENLVALYTFQVLQGLLYLHNQGVIHR 130
>SPAC23A1.06c |cmk2|mkp2|MAPK-activated protein kinase
Cmk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 504
Score = 31.9 bits (69), Expect = 0.090
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Frame = +2
Query: 314 ELRVGN-----KYRLGRKIGSGSFGDIYLGTNIVTREEVAIKL----ECIKTRHPQLHIE 466
E+RV N KY+L +G G+F +Y +I +E VA+K+ E K + + E
Sbjct: 53 EIRVANYPGLEKYQLIENLGDGAFSQVYKAYSIDRKEHVAVKVIRKYEMNKKQRQGVFKE 112
Query: 467 SKFYKLMQGRVGIPAIKWCGSEGDYNVMVMELL--GPSLEDLFNFCSRRFSL-KTVLLLA 637
+ ++ + + + +E D+ +VMEL G + NF +L + +++
Sbjct: 113 VNIMRRVKHKNVVNLFDFVETE-DFYHLVMELAEGGELFHQIVNFTYFSENLARHIIIQV 171
Query: 638 DQLISRIEDI 667
+ + + D+
Sbjct: 172 AEAVKHLHDV 181
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 31.9 bits (69), Expect = 0.090
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2
Query: 332 KYRLGRKIGSGSFGDIYLGTNIVTREEVAIK 424
+++ G + SG FGD+Y G N+ T + +A+K
Sbjct: 1036 RWQQGHFVRSGMFGDVYTGVNMETGDLLAVK 1066
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase
Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 31.5 bits (68), Expect = 0.12
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 332 KYRLGRKIGSGSFGDIYLGTNIVTREEVAIK 424
+++ G IGSGSFG +Y N+ T + +A+K
Sbjct: 1119 RWQQGGLIGSGSFGTVYRAVNLDTGDLMAVK 1149
>SPAC821.12 |orb6||serine/threonine protein kinase
Orb6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 469
Score = 31.1 bits (67), Expect = 0.16
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Frame = +2
Query: 353 IGSGSFGDIYLGTNIVTREEVAIK--LECIKTRHPQL-HIESKFYKLMQG-RVGIPAIKW 520
IG G+FG++ L + T + A+K L+ + QL H++++ L++ + ++ +
Sbjct: 99 IGKGAFGEVRLVQKLDTGKIYAMKSLLKTEMFKRDQLAHVKAERDLLVESDSPWVVSLYY 158
Query: 521 CGSEGDYNVMVMELL--GPSLEDLFNFCSRRFSLKTVLLLADQLISRIEDIHYRNFIHR 691
+ Y ++ME L G + L N+ + FS + + I D+H +IHR
Sbjct: 159 AFQDSLYLYLIMEFLPGGDLMTMLINYDT--FSEDVTRFYMAECVLAIADVHRMGYIHR 215
>SPCC320.13c |ark1|aim1, SPCC330.16|aurora-B kinase
Ark1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 31.1 bits (67), Expect = 0.16
Identities = 30/135 (22%), Positives = 59/135 (43%), Gaps = 9/135 (6%)
Frame = +2
Query: 314 ELRVGNKYRLGRKIGSGSFGDIYLGTNIVTREEVAIKLECIKTRHPQLHIESKFYKLMQG 493
E +G + +G+ +G G FG +YL +E+ + +KT H ++SK K ++
Sbjct: 83 EFHIG-MFEIGKPLGKGKFGRVYL-----AKEKKTGFIVALKTLHKSELVQSKIEKQVRR 136
Query: 494 RVGIPA-------IKWCGSEGDYNVMVMELLGPSLEDLFNFCSR--RFSLKTVLLLADQL 646
+ I + ++ G D + + L +L+ R RFS + Q+
Sbjct: 137 EIEIQSNLRHKNILRLYGHFHDEKRIYLILEFAGRGELYQHLRRAKRFSEEVASKYIFQM 196
Query: 647 ISRIEDIHYRNFIHR 691
+ + +H ++ IHR
Sbjct: 197 ANALSYLHKKHVIHR 211
>SPAC2C4.14c |ppk11||PAK-related kinase Ppk11|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 312
Score = 30.7 bits (66), Expect = 0.21
Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Frame = +2
Query: 329 NKYRLGRKIGSGSFGDIYLGTNIVTREEVAIKLECIKTRHPQLHIESKFYKLMQGRVGIP 508
++YR + IG GSFG ++ ++ + + VA+K+ + Q+ ++ + +
Sbjct: 4 HQYRDLQLIGQGSFGSVFRAQDVESSKIVALKVVDLDATKDQIETLTQEINFLIDLNSVH 63
Query: 509 AIKWCGS--EGDYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLISRIEDIHYRN 679
K+ S +G + ME G S DL S FS + + + Q++ + +H +
Sbjct: 64 ITKYYASFVDGFRLWITMEYCDGGSCLDLLKL-SGTFSERVIAEVMRQVLEALVYLHGQG 122
Query: 680 FIHR 691
+HR
Sbjct: 123 KMHR 126
>SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase
Nak1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 30.7 bits (66), Expect = 0.21
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Frame = +2
Query: 353 IGSGSFGDIYLGTNIVTREEVAIKLECIKTRHPQLHIESK----FYKLMQGRVGIPAIKW 520
+G GS+G +Y G +T+E VAIK+ + T ++ K +L Q V IK+
Sbjct: 16 VGRGSYGAVYRGICNLTKETVAIKILNLDTDEDEVSDIQKEVAVLSELKQSDVE-NIIKY 74
Query: 521 CGS--EGDYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLISRIEDIHYRNFIHR 691
GS G ++M+ G S+ L + S + L+ + + ++ IH+ IHR
Sbjct: 75 HGSYLVGTNLWIIMDYCHGGSVRTLME--AGPISEPCISLILRETLQALKFIHHAGIIHR 132
>SPBC19F8.07 |crk1|mop1, mcs6|cyclin-dependent kinase activating
kinase Crk1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 335
Score = 29.9 bits (64), Expect = 0.36
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 4/119 (3%)
Frame = +2
Query: 347 RKIGSGSFGDIYLGTNIVTREEVAIKLECIKTRHPQLHI----ESKFYKLMQGRVGIPAI 514
RK+G G++ ++LG T VAIK + + I E KF + + I +
Sbjct: 15 RKVGEGTYAVVFLGRQKETNRRVAIKKIKVGQFKDGIDISALREIKFLRESRHDNVIELV 74
Query: 515 KWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLISRIEDIHYRNFIHR 691
++ + N+ ++E L LE L F + L+ + IH R +HR
Sbjct: 75 DVFSTKSNLNI-ILEFLDSDLEMLIKDKFIVFQPAHIKSWMVMLLRGLHHIHSRFILHR 132
>SPAC1952.17c ||SPAC890.01c|GTPase activating
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 619
Score = 29.9 bits (64), Expect = 0.36
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 49 KIWFLVHVFLPVDKSNLQLILVKNIDFFT 135
K W L+ FLP D+SN Q +L K+ +T
Sbjct: 42 KAWMLMLEFLPTDRSNWQSVLEKHRKTYT 70
>SPCC1322.08 |srk1|mkp1|MAPK-activated protein kinase
Srk1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 580
Score = 29.5 bits (63), Expect = 0.48
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 332 KYRLGRKIGSGSFGDIYLGTNIVTREEVAIKL 427
+Y L +K+G G+F ++Y + T E+VAIK+
Sbjct: 123 QYTLLQKMGDGAFSNVYKAIHNRTGEKVAIKV 154
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 29.5 bits (63), Expect = 0.48
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Frame = +2
Query: 323 VGNKYRLGRKIGSGSFGDIYLGTNIVTREEVAIKLECIKTR-HPQLHIESKFYKLMQGRV 499
+ +Y + +G GSFG + + T + VA+K+ K R H Q +E+K L + R
Sbjct: 695 IAYRYEVVDFLGKGSFGQVLRCIDYETGKLVALKIIRNKKRFHMQALVETKI--LQKIRE 752
Query: 500 GIPAIKWCGSE-------GDYNVMVMELLGPSLEDLFNFCS-RRFSLKTVLLLADQLISR 655
P ++C + D+ + ELLG +L +L + + + + QLI
Sbjct: 753 WDPLDEYCMVQYTDHFYFRDHLCVATELLGKNLYELIKSNGFKGLPIVVIKSITRQLIQC 812
Query: 656 IEDIHYRNFIH 688
+ ++ ++ IH
Sbjct: 813 LTLLNEKHVIH 823
>SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalytic
subunit Pka1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 29.1 bits (62), Expect = 0.64
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Frame = +2
Query: 353 IGSGSFGDIYLGTNIVTREEVAIK-LECIK-TRHPQL-HIESKFYKLMQGRVGIPAIKWC 523
+G+GSFG ++L + R AIK LE K Q+ H + Y L + + I W
Sbjct: 207 LGTGSFGRVHLVQSNHNRLYYAIKVLEKKKIVDMKQIEHTCDERYILSRVQHPFITILWG 266
Query: 524 GSEGDYNV-MVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLISRIEDIHYRNFIHR 691
+ N+ MVM+ G L L C RF K A ++I ++ +H+ ++R
Sbjct: 267 TFQDAKNLFMVMDFAEGGELFSLLRKC-HRFPEKVAKFYAAEVILALDYLHHNQIVYR 323
>SPCC162.10 |ppk33||serine/threonine protein kinase Ppk33
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 29.1 bits (62), Expect = 0.64
Identities = 29/127 (22%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Frame = +2
Query: 329 NKYRLGRKIGSGSFGDIYLGTNIVTREEVAIKLECI-KTRHPQLHIES-KFYKLMQGRVG 502
+++++ IG GS+ +++ + T++ A+K CI K +H + I+ + L+ +
Sbjct: 28 SQFKIRNVIGKGSWSTVFVVKHRQTKQRFALK--CINKKKHDEHKIKKLRNEVLLLQSLN 85
Query: 503 IPAIKWCGSEGDYNV---MVMEL-LGPSLEDLFNFCSRRFSLKTVLLLADQLISRIEDIH 670
P + SE + +V +L LG L ++ R+F+ + + +L+S + IH
Sbjct: 86 HPLLCKFYSEFEDETKIYLVTDLMLGGDLR--YHISQRKFNESVIRIWMVELVSALIYIH 143
Query: 671 YRNFIHR 691
+ +HR
Sbjct: 144 SKGVLHR 150
>SPCC576.15c |ksg1||serine/threonine protein kinase
Ksg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 592
Score = 29.1 bits (62), Expect = 0.64
Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 6/125 (4%)
Frame = +2
Query: 335 YRLGRKIGSGSFGDIYLGTNIVTREEVAIKL----ECIKTRHPQ-LHIESKFYKLMQGRV 499
++ G +G GS+ + T T+ E AIK+ IK + + ++IE + ++
Sbjct: 99 FKFGEILGEGSYSTVLTATENSTKREYAIKVLDKRHIIKEKKEKYVNIEKEALCILSKHP 158
Query: 500 GIPAIKWCGSEGDYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLISRIEDIHYR 676
G + + + V+ L L D N RF+ A ++ I+ +H R
Sbjct: 159 GFIKLFYTFQDAHNLYFVLSLARNGELLDYINKLG-RFNEICAQYYAALIVDSIDYMHGR 217
Query: 677 NFIHR 691
IHR
Sbjct: 218 GVIHR 222
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 28.7 bits (61), Expect = 0.84
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 335 YRLGRKIGSGSFGDIYLGTNIVTREEVAIK 424
YR KIG G+ GD+Y + T VAIK
Sbjct: 386 YRNFVKIGQGASGDVYSARQVGTNLSVAIK 415
>SPBC577.12 |mug71||endoribonuclease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 606
Score = 28.7 bits (61), Expect = 0.84
Identities = 9/40 (22%), Positives = 25/40 (62%)
Frame = +3
Query: 240 IWPSCNELVVSNIICGSISLLILKWSFVSVTNTDLGEKLA 359
+W E ++++++ ++ +++K + + +T DLG+ LA
Sbjct: 139 LWQKDQEKLLNDMVVSGLNAILIKVAAIGLTRKDLGKSLA 178
>SPBC1683.04 |||glycosyl hydrolase family 3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 832
Score = 28.7 bits (61), Expect = 0.84
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2
Query: 515 KWCGSEGDYNVMV 553
KWC EG+YNV+V
Sbjct: 796 KWCSEEGEYNVLV 808
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 28.7 bits (61), Expect = 0.84
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 13/132 (9%)
Frame = +2
Query: 335 YRLGRKIGSGSFGDIYLG------TNIVTRE--EVAIKLECIKTRHPQLHIESKFYKLMQ 490
Y LGR IG+G FG + LG + + R +V IK+ ++ Q + +++
Sbjct: 492 YILGRTIGTGEFGKVKLGWPLPKANSTIHRSTPQVVIKIVLSTKQNCQTSRLMREVAILK 551
Query: 491 GRVG-----IPAIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLISR 655
G + + + ++ + +++ + G L D + RR L QLIS
Sbjct: 552 GLGNNHPHIVKYLDFVKTKHHFGIVLDYVNGGELFD-YILARRRLEDSVACRLFAQLISG 610
Query: 656 IEDIHYRNFIHR 691
+ +H R +HR
Sbjct: 611 VAYLHSRGVVHR 622
>SPBC119.16c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 28.3 bits (60), Expect = 1.1
Identities = 20/78 (25%), Positives = 34/78 (43%)
Frame = +2
Query: 434 IKTRHPQLHIESKFYKLMQGRVGIPAIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 613
++T L +S F KL + I Y ++++ LGP+ L+ F +R
Sbjct: 143 LQTSAVNLEFDSLFEKLQGNKFAILGANSKELSQSYATILLDHLGPAFYCLYKFALQRKR 202
Query: 614 LKTVLLLADQLISRIEDI 667
+ + DQL S I+ I
Sbjct: 203 ILLISSHDDQLYSIIDMI 220
>SPCC1919.01 |ppk34|SPCC830.12|serine/threonine protein kinase
Ppk34|Schizosaccharomyces pombe|chr 3|||Manual
Length = 354
Score = 28.3 bits (60), Expect = 1.1
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +2
Query: 332 KYRLGRKIGSGSFGDIYLGTNIVTREEVAIKLECIKTRHPQLHIESKFYKLMQ 490
+YRL +G G+ +YL ++ T E AIK E KT L KF +LMQ
Sbjct: 39 QYRLKNMLGYGACSTVYLAVDVSTNIEYAIK-EFKKT---SLRRREKF-RLMQ 86
>SPBC1778.10c |ppk21|SPBC4C3.11|serine/threonine protein kinase
Ppk21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 27.5 bits (58), Expect = 1.9
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Frame = +2
Query: 335 YRLGRKIGSGSFGDIYLGTNIVTREEVAIKLECIK-----TRHPQLHIESKFYKLMQGRV 499
Y G IG GSF + T+ + +E AIK+ K + ++IE + G
Sbjct: 54 YVFGDIIGDGSFSKVRRATDKKSWKEYAIKVLDKKYIVKENKVKYVNIERDSMMRLNGFP 113
Query: 500 GIPAIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF-SLKTVLLLADQLISRIEDIHYR 676
GI + + + D + + L P+ E L RF V A +++S IE +H
Sbjct: 114 GISRL-FHTFQDDLKLYYVLELAPNGELLQYIKKYRFLDENCVRFYAAEILSSIEYMHSC 172
Query: 677 NFIHR 691
IHR
Sbjct: 173 GIIHR 177
>SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase
Cmk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 27.5 bits (58), Expect = 1.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 332 KYRLGRKIGSGSFGDIYLGTNIVTREEVAIKL 427
KYR+GR +G G++ + +I T + A K+
Sbjct: 30 KYRVGRVLGGGTYATVREAVHIETNKMYAAKI 61
>SPAC637.09 |||ribonuclease H70 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 623
Score = 27.5 bits (58), Expect = 1.9
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 425 LECIKTRHPQLHIESKFYKLMQGRVGIPAIKWCGSE 532
L C+K HP + + Y +G P++KW ++
Sbjct: 356 LNCLKFTHPHIIDTANIYNHTRGPPSKPSLKWLATK 391
>SPAC3H1.13 |ppk13||serine/threonine protein kinase Ppk13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 344
Score = 27.1 bits (57), Expect = 2.6
Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 332 KYRLGRKIGSGSFGDIYLGTNIVTREEVAI-KLEC 433
+YR+ + +G G F +YL N+ + A+ K++C
Sbjct: 31 RYRIQKLLGEGGFAFVYLVQNVSNEKLYALKKIKC 65
>SPAC15F9.01c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 227
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 512 IKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSL 616
I W ++G NVM M LG EDL+N+ + R +L
Sbjct: 190 IVWHTAKGT-NVMTMGPLGLKDEDLWNYANERSNL 223
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 335 YRLGRKIGSGSFGDIYLGTNIVTREEVAIKL 427
Y + + I G+FG +YL T E AIK+
Sbjct: 564 YEIIKPISKGTFGTVYLSRKNTTGEIYAIKV 594
>SPAC644.06c |cdr1|nim1|GIN4 family protein kinase
Cdr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +2
Query: 335 YRLGRKIGSGSFGDIYLGTNIVTREEVAIKLECIKTRHPQLHIESKFYKLMQ 490
+RLG+ +G+GS + L + T + AIK+ I R+ + +E +L++
Sbjct: 12 WRLGKTLGTGSTSCVRLAKHAKTGDLAAIKI--IPIRYASIGMEILMMRLLR 61
>SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 326 GNKYRLGRKIGSGSFGDIYLGTNIVTREEVAIKL 427
G KY + +G G+FG + ++ T++ VAIK+
Sbjct: 127 GRKYLILDTLGHGTFGQVARCQDLKTQQIVAIKV 160
>SPAC17A5.11 |rec12|spo11|endonuclease Rec12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 345
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 554 MELLGPSLEDLFNFCSRRFSLK 619
++LLGP ED+FN ++ FSLK
Sbjct: 259 LQLLGPLYEDIFN-KNQEFSLK 279
>SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 607
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +2
Query: 350 KIGSGSFGDIYLGTNIVTREEVAIKL 427
++G G +G ++L T+E VA+K+
Sbjct: 213 QVGQGGYGSVWLARKRDTKEIVALKI 238
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,781,177
Number of Sequences: 5004
Number of extensions: 56155
Number of successful extensions: 199
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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