SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30b06
         (679 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VGP7 Cluster: CG5242-PA; n=5; Endopterygota|Rep: CG52...   153   5e-36
UniRef50_UPI00015B5B29 Cluster: PREDICTED: similar to ENSANGP000...   144   2e-33
UniRef50_UPI00003C02B2 Cluster: PREDICTED: similar to mitochondr...   122   1e-26
UniRef50_UPI00005879F9 Cluster: PREDICTED: hypothetical protein;...    98   1e-19
UniRef50_A4IHC1 Cluster: Mitochondrial ribosomal protein L40; n=...    93   7e-18
UniRef50_Q9NQ50 Cluster: 39S ribosomal protein L40, mitochondria...    93   7e-18
UniRef50_Q9TZ90 Cluster: Putative uncharacterized protein; n=2; ...    89   1e-16
UniRef50_Q5DHT0 Cluster: SJCHGC09015 protein; n=1; Schistosoma j...    69   1e-10
UniRef50_Q22CP4 Cluster: Putative uncharacterized protein; n=1; ...    36   0.91 
UniRef50_Q5KZA3 Cluster: Putative uncharacterized protein GK1698...    35   1.6  
UniRef50_Q9HHY2 Cluster: Vng6173c; n=1; Halobacterium salinarum|...    34   2.8  
UniRef50_A5K736 Cluster: Reticulocyte binding protein 2, putativ...    34   3.7  
UniRef50_Q3V203 Cluster: 14, 17 days embryo head cDNA, RIKEN ful...    33   6.4  
UniRef50_A2ELK3 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  
UniRef50_A0BLG5 Cluster: Chromosome undetermined scaffold_114, w...    33   6.4  
UniRef50_UPI000023E7D1 Cluster: predicted protein; n=1; Gibberel...    33   8.4  
UniRef50_Q236Y9 Cluster: Cyclic nucleotide-binding domain contai...    33   8.4  
UniRef50_P62135 Cluster: DNA double-strand break repair rad50 AT...    33   8.4  

>UniRef50_Q9VGP7 Cluster: CG5242-PA; n=5; Endopterygota|Rep:
           CG5242-PA - Drosophila melanogaster (Fruit fly)
          Length = 196

 Score =  153 bits (370), Expect = 5e-36
 Identities = 85/196 (43%), Positives = 114/196 (58%), Gaps = 1/196 (0%)
 Frame = +2

Query: 92  MSILRQFSRLSICPTVKFQLNRNISTTS-ALTFKITEQLWAEPMXXXXXIDPAIVKAXXX 268
           MS+L  F+RLS+      Q +  ++  + A     T  L AEP+     +DP IVK    
Sbjct: 1   MSLLGAFARLSL------QRSGGVAGAAFARCLHTTPVLCAEPLKKKKKLDPQIVKQRED 54

Query: 269 XXXXXXXXXXXXXXXNARQLKPIDELEVPLHLMDSLKKYKRPPVQLSVEEIEARELLQKE 448
                          NARQLKP+DELEVPL L+D   K +R    L+++++E R LL+K+
Sbjct: 55  RKKKKIEKQIRRLEKNARQLKPVDELEVPLELIDEKDKRQRKLAPLTIDQLEERALLKKQ 114

Query: 449 WARYKRDEYMNNIAQVDRIMAAQRRALDRLYEESEDLYNEAIMPDLQLLPYTISGPVATP 628
           WA YK DE + +   +DR++ AQ +AL  L  ESE+LY  AI  D QLLP  + GPVATP
Sbjct: 115 WAHYKHDERVADFQIIDRLVQAQNKALAELRRESEELYQAAIDIDPQLLPVAVKGPVATP 174

Query: 629 PIKDYESPDGEYIDVS 676
           PIKDY SPDG+Y+  S
Sbjct: 175 PIKDYVSPDGDYLHQS 190


>UniRef50_UPI00015B5B29 Cluster: PREDICTED: similar to
           ENSANGP00000019899; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000019899 - Nasonia
           vitripennis
          Length = 203

 Score =  144 bits (349), Expect = 2e-33
 Identities = 78/198 (39%), Positives = 112/198 (56%)
 Frame = +2

Query: 86  FKMSILRQFSRLSICPTVKFQLNRNISTTSALTFKITEQLWAEPMXXXXXIDPAIVKAXX 265
           +   I+  FSRL++     F   RNIS+++ L   +T  L+AEP+     +DPAI++A  
Sbjct: 2   YSTGIINAFSRLAVNNV--FVPTRNISSSAPLGLNVTNVLFAEPLKKKKKMDPAIIRAKE 59

Query: 266 XXXXXXXXXXXXXXXXNARQLKPIDELEVPLHLMDSLKKYKRPPVQLSVEEIEARELLQK 445
                           +A+QLKPI E+EVP+ L   L   KR    L+ E +E R  L K
Sbjct: 60  ERRKRKLEKFIRKLQKHAQQLKPIFEMEVPMSLKQELGIRKRDLPALTTETLEERAALFK 119

Query: 446 EWARYKRDEYMNNIAQVDRIMAAQRRALDRLYEESEDLYNEAIMPDLQLLPYTISGPVAT 625
           EW +YK  ++   +  +DR M AQ +A+  L E SE+LY  AI  D  LLPY+  GP+ T
Sbjct: 120 EWNKYKTKQHYQTLRLIDRYMFAQDKAISELKEVSEELYEAAIQIDPDLLPYSRKGPLNT 179

Query: 626 PPIKDYESPDGEYIDVSK 679
            PI+D+E+PDG+Y DV+K
Sbjct: 180 APIEDFEAPDGDYQDVTK 197


>UniRef50_UPI00003C02B2 Cluster: PREDICTED: similar to mitochondrial
           ribosomal protein L40 CG5242-PA; n=1; Apis
           mellifera|Rep: PREDICTED: similar to mitochondrial
           ribosomal protein L40 CG5242-PA - Apis mellifera
          Length = 202

 Score =  122 bits (293), Expect = 1e-26
 Identities = 70/190 (36%), Positives = 109/190 (57%), Gaps = 3/190 (1%)
 Frame = +2

Query: 116 RLSICPTVKFQLNRNIST-TSALTFKITEQLWAEPMXXXXXIDPAIVKAXXXXXXXXXXX 292
           R S+C     + +RNIS  T  L F+ TE L  EP+     +DPAI++A           
Sbjct: 13  RSSLC---SIKNSRNISVYTYPLYFRATEILLGEPLKKKKKLDPAIIRAKEERKKKKLQK 69

Query: 293 XXXXXXXNARQLKPIDELEVPLHLMDSLKKYKRPP--VQLSVEEIEARELLQKEWARYKR 466
                  +   +KPI E++    L ++L+  KRP     LS EEIE R LL++EW +YK+
Sbjct: 70  RIRSLEKHKDHMKPIFEIDT---LAETLQNDKRPCHLTSLSEEEIERRRLLEREWIKYKQ 126

Query: 467 DEYMNNIAQVDRIMAAQRRALDRLYEESEDLYNEAIMPDLQLLPYTISGPVATPPIKDYE 646
           ++++ ++  +  ++ +Q+ AL  L   S+ LY +AI  D   LPY ++GPV TPPI++Y+
Sbjct: 127 NQWLKDLQVIKSMVTSQKTALKELKAVSKQLYKKAIEFDDLYLPYDVTGPVHTPPIENYD 186

Query: 647 SPDGEYIDVS 676
           SPDGEYI+ +
Sbjct: 187 SPDGEYIETT 196


>UniRef50_UPI00005879F9 Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 187

 Score = 98.3 bits (234), Expect = 1e-19
 Identities = 63/181 (34%), Positives = 91/181 (50%), Gaps = 3/181 (1%)
 Frame = +2

Query: 146 QLNRNISTTSA-LTFKITEQLWAEPMXXXXXIDPAIVKAXXXXXXXXXXXXXXXXXXNAR 322
           QL RN  T +  L+ + T+ L AEP      +DP   +                      
Sbjct: 8   QLVRNFFTRAGGLSIRATQVLRAEPPKKKKRVDPK--QEVMRQQRLLKKLKKIQFKMGDP 65

Query: 323 QLKPIDELEVPLHLMDSLKKYKRPPVQLSVEEIEARELLQKEWARYKRDEYMNNIAQVDR 502
           +LKPI + +V   LM+  +K  R   +   E  E R  LQK W+RYK  +++     + +
Sbjct: 66  ELKPIVDFDVDRKLMEDDRK--RDDNEADFETSEERARLQKAWSRYKFQQHVTETNTIKK 123

Query: 503 IMAAQRRALDRLYEESEDLYNEAIMPDLQLLPYTISGPVATPPIKDYE--SPDGEYIDVS 676
            + +Q +AL+ L  ESE+LY  AI  D +L P  I+GP  TPP+ DY   SPDG+YIDV+
Sbjct: 124 SIRSQTKALEELRLESEELYQAAIQRDPRLFPLLITGPTYTPPVTDYSAVSPDGDYIDVT 183

Query: 677 K 679
           K
Sbjct: 184 K 184


>UniRef50_A4IHC1 Cluster: Mitochondrial ribosomal protein L40; n=6;
           Tetrapoda|Rep: Mitochondrial ribosomal protein L40 -
           Xenopus tropicalis (Western clawed frog) (Silurana
           tropicalis)
          Length = 199

 Score = 92.7 bits (220), Expect = 7e-18
 Identities = 50/119 (42%), Positives = 67/119 (56%)
 Frame = +2

Query: 323 QLKPIDELEVPLHLMDSLKKYKRPPVQLSVEEIEARELLQKEWARYKRDEYMNNIAQVDR 502
           QL PI++   P   +D  +   R P Q++ EE E R LL K WA  K+ E+      +  
Sbjct: 79  QLIPIEDFIKPAKFLDETRV--RTPPQITPEEQERRALLMKTWALSKQQEHEAENRGLQS 136

Query: 503 IMAAQRRALDRLYEESEDLYNEAIMPDLQLLPYTISGPVATPPIKDYESPDGEYIDVSK 679
           ++ AQ  AL  L  ESE+LYN AI+ D  LLP    GP  TPP+  Y +PDG+Y DV+K
Sbjct: 137 LLEAQEEALRELRLESEELYNAAILTDPGLLPLESQGPCNTPPVPQYNAPDGKYNDVTK 195


>UniRef50_Q9NQ50 Cluster: 39S ribosomal protein L40, mitochondrial
           precursor; n=18; Euteleostomi|Rep: 39S ribosomal protein
           L40, mitochondrial precursor - Homo sapiens (Human)
          Length = 206

 Score = 92.7 bits (220), Expect = 7e-18
 Identities = 48/120 (40%), Positives = 71/120 (59%)
 Frame = +2

Query: 320 RQLKPIDELEVPLHLMDSLKKYKRPPVQLSVEEIEARELLQKEWARYKRDEYMNNIAQVD 499
           ++L PI++   PL  +D  K  +RP V+L+ EE E R LL K+W+ YK+ E       + 
Sbjct: 80  QELIPIEDFITPLKFLD--KARERPQVELTFEETERRALLLKKWSLYKQQERKMERDTIR 137

Query: 500 RIMAAQRRALDRLYEESEDLYNEAIMPDLQLLPYTISGPVATPPIKDYESPDGEYIDVSK 679
            ++ AQ+ AL+ L  ES  L+ EAI  D  L P+   GP  TPPI +Y+ P+G Y D++K
Sbjct: 138 AMLEAQQEALEELQLESPKLHAEAIKRDPNLFPFEKEGPHYTPPIPNYQPPEGRYNDITK 197


>UniRef50_Q9TZ90 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 189

 Score = 88.6 bits (210), Expect = 1e-16
 Identities = 54/195 (27%), Positives = 100/195 (51%)
 Frame = +2

Query: 95  SILRQFSRLSICPTVKFQLNRNISTTSALTFKITEQLWAEPMXXXXXIDPAIVKAXXXXX 274
           S+L   SRLS+  T   Q+++ I   S++  K  ++           IDP + K      
Sbjct: 4   SLLASLSRLSLLQTR--QIHQTIPAGSSVFMKRQKK-----------IDPEVAKQRETRR 50

Query: 275 XXXXXXXXXXXXXNARQLKPIDELEVPLHLMDSLKKYKRPPVQLSVEEIEARELLQKEWA 454
                        ++++ KP+DEL + +    ++ + +RP  +L++E+I+ R +  K++ 
Sbjct: 51  RKRLEKDIRQMQKHSKKPKPVDELTLDVKSAKNIGERRRPRTELTLEQIDERAIALKDYT 110

Query: 455 RYKRDEYMNNIAQVDRIMAAQRRALDRLYEESEDLYNEAIMPDLQLLPYTISGPVATPPI 634
           R +      + A +   + +QR+AL+ L     +LY  A+ P  + LP  + GP  TPPI
Sbjct: 111 RSRLALQQEDDAWIRGAIESQRKALNELKMLKLELYEAAVQPAAKDLPLIVQGPSLTPPI 170

Query: 635 KDYESPDGEYIDVSK 679
           ++YE+PDG+YID ++
Sbjct: 171 RNYEAPDGDYIDTTR 185


>UniRef50_Q5DHT0 Cluster: SJCHGC09015 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09015 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 242

 Score = 68.9 bits (161), Expect = 1e-10
 Identities = 33/92 (35%), Positives = 56/92 (60%)
 Frame = +2

Query: 320 RQLKPIDELEVPLHLMDSLKKYKRPPVQLSVEEIEARELLQKEWARYKRDEYMNNIAQVD 499
           R+L+P++++E    LM  +K  +R P+ +S  E++ R  + K+W  Y+ +     I  + 
Sbjct: 71  RRLRPVEDIEGDRQLMKEIKLRQRLPIDISETELDERVGIWKKWTHYQANVAHREIIMLK 130

Query: 500 RIMAAQRRALDRLYEESEDLYNEAIMPDLQLL 595
           + +AAQ+ ALD LY+ S DLY EAI P  +L+
Sbjct: 131 KAIAAQQHALDCLYKTSPDLYKEAIKPCPELV 162


>UniRef50_Q22CP4 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 300

 Score = 35.9 bits (79), Expect = 0.91
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
 Frame = +2

Query: 377 KKYKRPPVQLSVEEIEARELLQKEWARYKRDEYMNNIAQVDR--IMAAQRRALDRLYEES 550
           KKY + P   + +      ++ KE A  KRDE+   +A V +  I A  +    RL+++ 
Sbjct: 120 KKYVQQPTSKASKRFGKYGIINKEHAYEKRDEFQQWLADVKKLNIEALTQNEERRLFDDF 179

Query: 551 EDLYNEAIMPD 583
            + YN A MP+
Sbjct: 180 IEDYNTASMPE 190


>UniRef50_Q5KZA3 Cluster: Putative uncharacterized protein GK1698;
           n=1; Geobacillus kaustophilus|Rep: Putative
           uncharacterized protein GK1698 - Geobacillus
           kaustophilus
          Length = 560

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 18/71 (25%), Positives = 35/71 (49%)
 Frame = +2

Query: 356 LHLMDSLKKYKRPPVQLSVEEIEARELLQKEWARYKRDEYMNNIAQVDRIMAAQRRALDR 535
           +HL   L+KYK     L  +E   R  ++K+  + K DE +    + + +++ Q+  + R
Sbjct: 22  IHLKSELEKYKTLLASLGSQEEWERLHMEKDELQAKHDELIGQCCRYEELLSEQKNEIKR 81

Query: 536 LYEESEDLYNE 568
           L E  + +  E
Sbjct: 82  LSEALKTMEEE 92


>UniRef50_Q9HHY2 Cluster: Vng6173c; n=1; Halobacterium
           salinarum|Rep: Vng6173c - Halobacterium salinarium
           (Halobacterium halobium)
          Length = 667

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 19/63 (30%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = +2

Query: 377 KKYKRPPVQLSVEEI-EARELLQKEWARYKRDEYMNNIAQVDRIMAAQRRALDRLYEESE 553
           K+ +R  VQ  +EE+ E+++ LQ+    ++RDE    ++++   +A + + L+ L EE E
Sbjct: 367 KRTERSEVQTEIEELRESQQELQE--VIHRRDEIGQRLSEISSEIAQRDQTLESLSEERE 424

Query: 554 DLY 562
           D++
Sbjct: 425 DVH 427


>UniRef50_A5K736 Cluster: Reticulocyte binding protein 2, putative;
           n=1; Plasmodium vivax|Rep: Reticulocyte binding protein
           2, putative - Plasmodium vivax
          Length = 2652

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 22/83 (26%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
 Frame = +2

Query: 329 KPIDELEVP-LHLMDSLKKYKRPPVQLSVEEIEARELLQKEWARYKRDEYMNNIAQVDRI 505
           K I++L++  L L++++KKY++   +L  +E +A  +L+++    K  EY+  I +  + 
Sbjct: 452 KEIEKLKIKILQLIEAIKKYQQHVEELINKE-KAVAILKEDIN--KIIEYIKGIIEKLKQ 508

Query: 506 MAAQRRALDRLYEESEDLYNEAI 574
           + +  +  D+++++ E L NEA+
Sbjct: 509 LISANKDFDKIFQQVEQLINEAL 531


>UniRef50_Q3V203 Cluster: 14, 17 days embryo head cDNA, RIKEN
           full-length enriched library, clone:3221403E08
           product:Hair follicle protein AHF homolog; n=9; cellular
           organisms|Rep: 14, 17 days embryo head cDNA, RIKEN
           full-length enriched library, clone:3221403E08
           product:Hair follicle protein AHF homolog - Mus musculus
           (Mouse)
          Length = 1135

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
 Frame = +2

Query: 347 EVPLH-LMDSLKKYKRPPVQ-LSVEEIEARELLQKEWARYKRDEYMNNIAQVDRIMAAQR 520
           E P+  L DS ++ +R   + L  EE E REL Q+   R +RD  +    Q  R    + 
Sbjct: 186 EEPIQQLEDSQERERRQDRRPLQDEEEEKRELEQERRRRQQRDRQILEEEQFQREHQREA 245

Query: 521 RALDRLYEESEDLYNEA 571
           R  D  ++E E L  E+
Sbjct: 246 RRRDETFQEEEQLQGES 262


>UniRef50_A2ELK3 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 290

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = +2

Query: 341 ELEVPLHLMDSLKKYKRPPVQLSVEEIEARELLQKEW-ARYKRDEYMNNIAQVDRIMAAQ 517
           ELE+   L   +K YK   +Q+   ++E  E L+ EW + + R E + N      +  ++
Sbjct: 81  ELEIDTKLSKLVKDYKNRFLQMKAAQLEEIEQLRSEWISSHDRAEQLGNQKVESLLYTSK 140

Query: 518 RRALDRLYEESEDLYN 565
             A  + ++E++ L N
Sbjct: 141 VLANCKCFDEAKTLRN 156


>UniRef50_A0BLG5 Cluster: Chromosome undetermined scaffold_114,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_114,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1611

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 16/71 (22%), Positives = 38/71 (53%)
 Frame = +2

Query: 398 VQLSVEEIEARELLQKEWARYKRDEYMNNIAQVDRIMAAQRRALDRLYEESEDLYNEAIM 577
           ++L +++I+  + L+       +++  NNI+Q D+++      ++ LY E+E+ +   I+
Sbjct: 318 LRLKIQQIDIEDQLRANRTYQVKEQQENNISQKDKMIILHSLIIENLYREAEN-HKSKIL 376

Query: 578 PDLQLLPYTIS 610
              Q   Y I+
Sbjct: 377 ISYQKYQYKIN 387


>UniRef50_UPI000023E7D1 Cluster: predicted protein; n=1; Gibberella
           zeae PH-1|Rep: predicted protein - Gibberella zeae PH-1
          Length = 270

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +3

Query: 396 LFSCRSKKSKPA-SYSKRNGLVTNVMNI*TTLHKSTGSWQPRDALWTGCT 542
           +FS RS K  PA +YS++N ++ ++  +   +  ST +W+ R  +    T
Sbjct: 205 MFSSRSSKPVPAGNYSQQNAMLRSLRKVVVPITMSTDTWEDRSRILRAAT 254


>UniRef50_Q236Y9 Cluster: Cyclic nucleotide-binding domain
           containing protein; n=1; Tetrahymena thermophila
           SB210|Rep: Cyclic nucleotide-binding domain containing
           protein - Tetrahymena thermophila SB210
          Length = 983

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 22/94 (23%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
 Frame = +2

Query: 314 NARQLKPIDELEVP-LHLMDSLKKYKRPPVQLSVEEIEARELLQKEWARYKR-DEYMNNI 487
           N++ +  ++ L V  L L  S  K K+  +Q  + +   R+++QK   +YK   +  + +
Sbjct: 33  NSKVISNVNSLNVQSLQLNLSFTKRKQSKMQTHLSKATQRKIIQKVIKKYKAVQQAFSKL 92

Query: 488 AQVDRIMAAQRRALDRLYEESEDLYNEAIMPDLQ 589
            Q++R++ AQ      + + S   + ++I   LQ
Sbjct: 93  VQINRLIKAQMNVFQTIPKLSPFSFKKSIWDLLQ 126


>UniRef50_P62135 Cluster: DNA double-strand break repair rad50
           ATPase; n=1; Nanoarchaeum equitans|Rep: DNA
           double-strand break repair rad50 ATPase - Nanoarchaeum
           equitans
          Length = 786

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 21/57 (36%), Positives = 31/57 (54%)
 Frame = +2

Query: 320 RQLKPIDELEVPLHLMDSLKKYKRPPVQLSVEEIEARELLQKEWARYKRDEYMNNIA 490
           +++KPI ELE+P   +D    YK   +   V  +EA+    KE+ RYK  E   +IA
Sbjct: 479 KEIKPIIELEIPKIELDESIPYKYKQLLNKVSYLEAK---IKEYERYKNIECPYDIA 532


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,850,462
Number of Sequences: 1657284
Number of extensions: 10862789
Number of successful extensions: 27618
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 26853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27609
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -