Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30b06
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    25   0.57 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.0  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   7.0  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   9.3  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +2

Query: 491 QVDRIMAAQRRALDRLYEESEDLYN 565
           ++DRI A  R+ +  L++ S ++YN
Sbjct: 303 EIDRINAESRKPIRILFDVSSEIYN 327


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 506 MAAQRRALDRLYEESEDLYNEAIMPD 583
           MAA+ R      EE+E LY+   MP+
Sbjct: 1   MAARHRFATGSPEETEPLYSSTQMPE 26


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 506 MAAQRRALDRLYEESEDLYNEAIMPD 583
           MAA+ R      EE+E LY+   MP+
Sbjct: 1   MAARHRFATGSPEETEPLYSSTQMPE 26


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +2

Query: 530 DRLYEESEDLYNEAIMPDLQLL 595
           +R++EE E+ +++   PD + L
Sbjct: 20  ERIFEEIEETFSDDTKPDYKSL 41


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 571 YYARLATTALYHK 609
           YY  L   ALYHK
Sbjct: 42  YYQYLQNAALYHK 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,151
Number of Sequences: 336
Number of extensions: 2820
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)