Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30b05
         (136 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   0.49 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   0.49 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    19   4.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    19   4.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 0.49
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 67   FFFYMIKFSKV 99
            +FFY++KF KV
Sbjct: 1028 YFFYLVKFYKV 1038


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 0.49
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 67  FFFYMIKFSKV 99
           +FFY++KF KV
Sbjct: 309 YFFYLVKFYKV 319


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 8   IENFVCDATLVGK 46
           +E+FVC  TLV +
Sbjct: 342 VESFVCVNTLVSE 354


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +3

Query: 48  HCIFILIFFLHDQILESVYLIFD 116
           +C FI++F+L   ++   Y   D
Sbjct: 321 YCNFIILFYLSVFVILVYYASLD 343


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,771
Number of Sequences: 336
Number of extensions: 471
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 25
effective length of database: 114,185
effective search space used:  2169515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)