Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30b04
         (742 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0J5V6 Cluster: Os08g0398500 protein; n=4; Oryza sativa...    35   1.8  
UniRef50_Q8MP05 Cluster: Chitinase precursor; n=1; Tenebrio moli...    33   5.6  
UniRef50_O75475 Cluster: PC4 and SFRS1-interacting protein; n=44...    33   5.6  
UniRef50_Q3BPX8 Cluster: Putative uncharacterized protein; n=1; ...    33   7.4  
UniRef50_Q45WA6 Cluster: Rhoptry protein 14; n=1; Toxoplasma gon...    33   7.4  
UniRef50_A7LUU5 Cluster: Putative uncharacterized protein; n=1; ...    33   9.7  
UniRef50_A6CF33 Cluster: Probable integral membrane protein-puta...    33   9.7  
UniRef50_Q01FF1 Cluster: WD repeat protein WDR4; n=2; Ostreococc...    33   9.7  

>UniRef50_Q0J5V6 Cluster: Os08g0398500 protein; n=4; Oryza
           sativa|Rep: Os08g0398500 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 142

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +3

Query: 267 VDFQRKRDRATAARRNHTAGHHDKIMAAKKKPDDEQKDKGLENARDGDK 413
           V F RK + A  A+ +H     DK  A + KP+ E+K+K  +N  +  K
Sbjct: 16  VSFLRKMEAADVAKEHHKEEKKDKEHAKEAKPEKEKKEKKEKNGEEAAK 64


>UniRef50_Q8MP05 Cluster: Chitinase precursor; n=1; Tenebrio
            molitor|Rep: Chitinase precursor - Tenebrio molitor
            (Yellow mealworm)
          Length = 2838

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = +1

Query: 244  TPPGSRLMSTFRESATVRRPLGATTRPGTTTRSWP 348
            T   +R  +T R + T RR    TTRP TTT SWP
Sbjct: 1099 TTTTTRRTTTTRRTTTTRRT--TTTRPSTTTTSWP 1131


>UniRef50_O75475 Cluster: PC4 and SFRS1-interacting protein; n=44;
           Eumetazoa|Rep: PC4 and SFRS1-interacting protein - Homo
           sapiens (Human)
          Length = 530

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +3

Query: 285 RDRATAARRNHTAGHHDKIMAAKKKPDDEQKDKGLENARDGDK 413
           R+  TA RRN   G H+K  A +K+  +EQ +   +N  +G K
Sbjct: 292 RNFQTAHRRNMLKGQHEKEAADRKRKQEEQMETEQQNKDEGKK 334


>UniRef50_Q3BPX8 Cluster: Putative uncharacterized protein; n=1;
           Xanthomonas campestris pv. vesicatoria str. 85-10|Rep:
           Putative uncharacterized protein - Xanthomonas
           campestris pv. vesicatoria (strain 85-10)
          Length = 160

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -2

Query: 471 RTCPGAHLTWTATWIEHENTCLHHVHSRGPCPSVRRLVSSWRP 343
           R  PG+HL  T  W +     LH V      P+ R++   WRP
Sbjct: 11  RRTPGSHLLGTGLWPDLNARTLHPVGPTLQLPAPRQVAPQWRP 53


>UniRef50_Q45WA6 Cluster: Rhoptry protein 14; n=1; Toxoplasma
            gondii|Rep: Rhoptry protein 14 - Toxoplasma gondii
          Length = 1061

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 17/64 (26%), Positives = 33/64 (51%)
 Frame = +3

Query: 213  RKRSETDAPRYTARLKTYVDFQRKRDRATAARRNHTAGHHDKIMAAKKKPDDEQKDKGLE 392
            R+  E +  R   + +   D +R R++A AAR+        +I   KK+ ++E+K++  E
Sbjct: 840  REAEEAEKRRIAEQARQAEDEKRIREQAEAARKAEEEAVRKQIEEEKKRHEEEEKERQAE 899

Query: 393  NARD 404
              R+
Sbjct: 900  EERE 903


>UniRef50_A7LUU5 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides ovatus ATCC 8483|Rep: Putative
           uncharacterized protein - Bacteroides ovatus ATCC 8483
          Length = 290

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 18/35 (51%), Positives = 20/35 (57%)
 Frame = +1

Query: 244 TPPGSRLMSTFRESATVRRPLGATTRPGTTTRSWP 348
           T PG+   ST     T  RP G TTRPGT+TR  P
Sbjct: 65  TRPGTSRPSTSTRPDTSTRP-GTTTRPGTSTRPRP 98


>UniRef50_A6CF33 Cluster: Probable integral membrane
           protein-putative Na+H+ antiporter; n=1; Planctomyces
           maris DSM 8797|Rep: Probable integral membrane
           protein-putative Na+H+ antiporter - Planctomyces maris
           DSM 8797
          Length = 719

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
 Frame = -1

Query: 466 LSRGSPDLDRDMDRAREHLSPSR-----AFSRPLSFCSSSGFFLAAMILSWCPAVWLRRA 302
           L  G P LD+ M +  EH SP+R     +F   +S  +S   F  A+ L+ C   W   +
Sbjct: 426 LEEGKPLLDQSMSKILEHASPNRVLLISSFLASISAVASCS-FTKALSLNECVEAW---S 481

Query: 301 AVARSRFL*KST*VLSLAV 245
           A A+S FL     VL+ AV
Sbjct: 482 AGAKSMFLAILILVLAWAV 500


>UniRef50_Q01FF1 Cluster: WD repeat protein WDR4; n=2;
           Ostreococcus|Rep: WD repeat protein WDR4 - Ostreococcus
           tauri
          Length = 516

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +3

Query: 261 TYVDFQRKRDRATAARRNHTAGHHDKIMAAKKKPDDEQKDK 383
           TY    RKR+ + A R    A   D ++AA KK  +EQ+ K
Sbjct: 460 TYFSQLRKREYSEAQRMERKANRKDMLIAATKKAQEEQRAK 500


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 500,868,123
Number of Sequences: 1657284
Number of extensions: 7927477
Number of successful extensions: 27118
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27079
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)