BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30b04
(742 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p... 25 3.2
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 24 4.3
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 24 4.3
AJ441131-8|CAD29637.1| 756|Anopheles gambiae putative 5-oxoprol... 24 4.3
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 24 4.3
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol... 24 4.3
AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein p... 23 9.9
>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
ion/proton exchanger 3 protein.
Length = 1221
Score = 24.6 bits (51), Expect = 3.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 424 AREHLSPSRAFSRPLSFCSSSGFFLAAMILSWC 326
A+E SR+ P S SSS L A I+ WC
Sbjct: 65 AKELTDSSRSGGLPSSSSSSSLSCLLATIVMWC 97
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 24.2 bits (50), Expect = 4.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 250 PGSRLMSTFRESATVRRPLGATTRPGTTT 336
PG + +T R + T RP TT TTT
Sbjct: 93 PGDQTTTTLRPATTTLRPTTTTTDWITTT 121
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 24.2 bits (50), Expect = 4.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 250 PGSRLMSTFRESATVRRPLGATTRPGTTT 336
PG + +T R + T RP TT TTT
Sbjct: 93 PGDQTTTTLRPATTTLRPTTTTTDWITTT 121
>AJ441131-8|CAD29637.1| 756|Anopheles gambiae putative
5-oxoprolinase protein.
Length = 756
Score = 24.2 bits (50), Expect = 4.3
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 250 PGSRLMSTFRESATVRRPLGATTRPGTTTR 339
PGSR + T R T+ GA RP R
Sbjct: 688 PGSRALVTRRGDLTIEIGTGAAARPRVDER 717
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 24.2 bits (50), Expect = 4.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 128 SIGRNGPERGDGAGGREKEAERRVR 202
S G GP G G GGR+++ R R
Sbjct: 218 SSGGPGPGGGGGGGGRDRDHRDRDR 242
>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
5-oxoprolinase protein.
Length = 1344
Score = 24.2 bits (50), Expect = 4.3
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 250 PGSRLMSTFRESATVRRPLGATTRPGTTTR 339
PGSR + T R T+ GA RP R
Sbjct: 732 PGSRALVTRRGDLTIEIGTGAAARPRVDER 761
>AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein
protein.
Length = 357
Score = 23.0 bits (47), Expect = 9.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 329 VPGRVVAPSGRRTVALSLKVDISLEPGGVP 240
VPG VVA + L+ KV + + P P
Sbjct: 275 VPGAVVANPAATSAPLAFKVPLDVLPAPFP 304
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,871
Number of Sequences: 2352
Number of extensions: 7776
Number of successful extensions: 29
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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