Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30b01
(737 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomy... 30 0.40
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 29 0.52
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 29 0.69
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 28 1.2
SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit Air1|Schi... 28 1.6
SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr... 27 2.1
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 27 2.8
SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces pombe... 27 2.8
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 27 2.8
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 2.8
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 27 3.7
SPAC3C7.02c |||protein kinase inhibitor |Schizosaccharomyces pom... 27 3.7
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 26 4.9
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 4.9
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 26 4.9
SPAP27G11.12 |||human down-regulated in multiple cancers-1 homol... 25 8.5
>SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 523
Score = 29.9 bits (64), Expect = 0.40
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +2
Query: 398 QLNDLPLVFKRCDEIETLIKETYKKIQGKKAIDDLTKPKDDQSIKNKTLVKAINWWEDDY 577
QLND ++++ + E L +KKIQ K +DL + D K ++++N D Y
Sbjct: 246 QLNDFIALYEK--DREQLHSRDWKKIQLAKTQNDLGEFLDYIISNYKVPIESLNQPSDQY 303
Query: 578 ESDLSQISLEKDEDKISEDIM-KSRYFIDMI 667
+ + + IM + YF+DM+
Sbjct: 304 SFHDAYLQSYTHRYPVHRAIMCRCEYFLDML 334
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 29.5 bits (63), Expect = 0.52
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 10/209 (4%)
Frame = +2
Query: 113 RTDLNYQKKAHDKQLCEAVLRLSSVLARYSALYNEASECLHNNLQVQKKKYMQELIKTVE 292
+ +L+ + + QL EA RL + A Y L E H L + +K L+ +
Sbjct: 220 KENLSSELSISNIQLKEAKERLEAANASYQKLRRE-----HKELALYHEKKTHSLVCNLN 274
Query: 293 NRIIEIKNELQNLECSQCHFVGN--GVAREILTPDNTQLNDLPLVFKR--CDEIETLIKE 460
+ ++N S H N R L + L FK D +E +E
Sbjct: 275 GERKSFGDFVENEVKSYKHEYANICESLRRALVLIQGSCTEKILRFKEKILDLLEMKQQE 334
Query: 461 TYKKIQGKKAIDDLTKPKDDQSIKNKTL-VKAI----NWWEDDYESDLSQISLEKDEDKI 625
+I + +DLT K + I + VK ++ E +YE +S + +E EDK+
Sbjct: 335 ENDRISHIEYENDLTVKKLKRRISELEMAVKEYESEKSYSEKEYEEKISSLRIEL-EDKL 393
Query: 626 SE-DIMKSRYFIDMIKSHEKSRQTISLMR 709
+E D+++++ + K H S + L +
Sbjct: 394 AEIDMLRNKLLKEEHKHHSTSEKLEELSK 422
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 29.1 bits (62), Expect = 0.69
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = +2
Query: 542 LVKAINWWEDDYESDLSQISLEKDEDKISED---IMKSRYFIDMIKSHEKSR--QTISLM 706
+ KA+N EDD L+++ LE K+ D I+KS +D I+ H +T+ M
Sbjct: 1073 IYKAVNELEDDNGRPLNKLFLELPSKKLYPDYYMIIKSPIALDAIRKHINGTFYKTLEAM 1132
Query: 707 RS 712
+S
Sbjct: 1133 KS 1134
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 239 NLQVQKKKYMQELIKTVENRIIEIKNELQNLECSQ 343
+L++ K Q+LIKT+E+ + +I+NE +L Q
Sbjct: 337 DLKLACVKEKQQLIKTLESSLTQIRNERDSLVAKQ 371
>SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit
Air1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 313
Score = 27.9 bits (59), Expect = 1.6
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +2
Query: 518 DQSIKNKTLVKAINWW-EDDYES--DLSQISLEKDEDKISEDIMKSRYF 655
DQSI N ++ ++ DD++S DLS +LE E D+ + RYF
Sbjct: 31 DQSITNSVSLEKHDFQGSDDHDSSTDLSDSTLEDVEGSEWADVSRGRYF 79
>SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 27.5 bits (58), Expect = 2.1
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Frame = +2
Query: 224 ECL---HNNLQV---QKKKYMQELIKTVENRIIEIKNELQNLECSQCHFVGNGVAREILT 385
ECL HN ++ KK + + K +E + + + + F ++ L
Sbjct: 90 ECLVTYHNGIRAIYNTKKNEAKNMYKEIERLSVILGESVDEVNFVNGDF--EDISDIKLE 147
Query: 386 PDNTQLNDLPLVFKRCDEIETLIKETYKKIQGKKAIDDLTKPKDDQS 526
+ +LN+L +++ E IKE KK+Q +I L+ P DD S
Sbjct: 148 QLSAKLNELHQIYRLRKEKNIEIKEELKKLQDSLSI-KLSMPADDLS 193
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 425 KRCDEIETLIKETYKKIQGKKAID-DLTKPKDDQSIKNKTLVKA 553
KR D++E + E ++ G++ ++ D K K ++ KNK VKA
Sbjct: 1089 KRVDQLEEALNEKLARLVGEQMVEGDKEKDKTNEE-KNKDEVKA 1131
>SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 319
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = +2
Query: 293 NRIIE-IKNELQNLECSQCH 349
NR++E IKNEL++ C CH
Sbjct: 133 NRLLEKIKNELESFRCLCCH 152
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 425 KRCDEIETLIKETYKKIQGKKAID-DLTKPKDDQSIKNKTLVKA 553
KR D++E + E ++ G++ ++ D K K ++ KNK VKA
Sbjct: 1089 KRVDQLEEALNEKLARLVGEQMVEGDKEKDKTNEE-KNKDEVKA 1131
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.1 bits (57), Expect = 2.8
Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 19/227 (8%)
Frame = +2
Query: 92 NSLEALLRTDLNYQKKAHDKQLCEAVLRLSSVLARYSALYNEASECLHNNLQVQKKKYMQ 271
+SL++L R LN +KK H+ + S + L E S H + Q+ +
Sbjct: 511 SSLQSLQRDILN-EKKKHE-------VYESQLNELKGELQTEISNSEHLSSQLSTLAAEK 562
Query: 272 ELIKTVENRIIEIKNELQNLECSQCHFVGNGVAREILT-PDNTQ-LNDLPLVFKRCDE-- 439
E N + E KN LQ L C+ +A+ ++ +N Q + L FK+ +E
Sbjct: 563 EAAVATNNELSESKNSLQTL----CNAFQEKLAKSVMQLKENEQNFSSLDTSFKKLNESH 618
Query: 440 ---------IETLIKETYKKIQGKKAIDDLTKPKDDQ-SIKNKTLVKAINWWEDDYESDL 589
I +K+T K+Q + + K+ S +N L + E+ +S +
Sbjct: 619 QELENNHQTITKQLKDTSSKLQQLQLERANFEQKESTLSDENNDLRTKLLKLEESNKSLI 678
Query: 590 SQI----SLEKDEDKISEDIMKSRYFIDMIKSHEKS-RQTISLMRSR 715
+ SLEK+ + ED+ KS + K K+ R+ I ++ +
Sbjct: 679 KKQEDVDSLEKNIQTLKEDLRKSEEALRFSKLEAKNLREVIDNLKGK 725
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 617 DKISEDIMKSRYFIDMIKSHEKSRQTISLMRSRAYSRRI 733
DK+S+DI RYF + KS+ SL++ + R +
Sbjct: 250 DKVSDDINSGRYFFAK-DENSKSKSAASLVKPKIGIRHV 287
>SPAC3C7.02c |||protein kinase inhibitor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 383
Score = 26.6 bits (56), Expect = 3.7
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +2
Query: 497 DLTKPKDDQSIKNKTLVKAINWWEDDYESDLSQIS 601
DL + ++ +++ K +++W +D + D+S IS
Sbjct: 66 DLLRSYENVAMERKECANQLSYWGEDCDDDISDIS 100
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1919
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 47 KMSSNFYFIKWKNVLNSLEALLRTDLN 127
K+ N Y W N+ SL LL TD N
Sbjct: 1444 KILLNIYEKSWLNIAESLTILLSTDAN 1470
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.2 bits (55), Expect = 4.9
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Frame = +2
Query: 80 KNVLNSLEALLRTDLNYQKKAHDKQLCEAVLRLSSVLARYSALYNEASECLHNNLQ--VQ 253
K + +E R ++ K+ + Q V L L +LYN +E L+NN Q +
Sbjct: 275 KELEEEVETQKRLTALWESKSSELQ--SEVAALQEKLTSQQSLYNNVTEELNNNKQQLLI 332
Query: 254 KKKYMQELIKTVENRIIEIKNELQNLECSQCHFVG 358
+ ++EL + ++ + E++ +N S VG
Sbjct: 333 SENSLRELQEKYDSVVSELQVVKENKNTSVSAGVG 367
>SPBC3F6.05 |rga1||GTPase activating protein
Rga1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1150
Score = 26.2 bits (55), Expect = 4.9
Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 245 QVQKKKYMQELIKTVENRIIEIKNELQNLECSQCHFVGNGVAREILTPDNTQLN-DLPL 418
+V K + + + + + +LEC +CH + VA + D+ LN +PL
Sbjct: 109 KVSSSKICASCGQVISGQYVRALGNIYHLECFRCHDCNSLVASKFFPIDDPTLNKQVPL 167
>SPAP27G11.12 |||human down-regulated in multiple cancers-1 homolog
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 797
Score = 25.4 bits (53), Expect = 8.5
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 452 IKETYKKIQGKKAIDDLTKPKDDQSIKNKTLVKAINWWEDDYESDLSQISLEKD 613
+ ET + + +IDDLTK KD+ +T++ A+ W D DL + +L D
Sbjct: 36 LPETTEDVFHLMSIDDLTKVKDNAPENLQTII-AVLW---DKLEDLQKETLFDD 85
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,675,185
Number of Sequences: 5004
Number of extensions: 53067
Number of successful extensions: 211
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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