Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30b01
(737 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0642 - 4803464-4805665,4806231-4806320 33 0.18
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 33 0.31
09_04_0528 - 18348071-18348136,18348477-18351209 32 0.41
12_02_0202 - 15465885-15466241,15466539-15468122 31 1.3
10_08_1036 + 22470642-22470664,22470850-22471024,22471133-22473766 30 1.7
05_06_0101 - 25581800-25581943,25582030-25582095,25582268-255823... 30 1.7
10_05_0004 + 7717748-7717798,7718107-7718317,7719424-7720079,772... 30 2.2
08_01_0339 - 3003626-3004070,3004467-3004636,3004907-3005020,300... 29 3.9
01_06_0873 + 32617428-32617532,32618166-32618234,32619195-326193... 29 5.1
06_01_1090 - 8945909-8946125,8946607-8947562,8947733-8949835 28 6.7
06_01_0426 + 3050332-3050526,3050864-3051116,3051923-3051980,305... 28 6.7
05_01_0146 - 953957-956278,956468-956786,957185-957213 28 6.7
02_02_0565 + 11550071-11550909,11551603-11553133,11553205-11553537 28 6.7
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373... 28 8.9
10_08_1045 - 22535516-22535593,22535681-22535756,22535843-225359... 28 8.9
01_07_0105 - 41104655-41104851,41105818-41107150 28 8.9
01_06_0360 - 28729006-28729446,28729810-28730258,28730499-28731480 28 8.9
>02_01_0642 - 4803464-4805665,4806231-4806320
Length = 763
Score = 33.5 bits (73), Expect = 0.18
Identities = 25/127 (19%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Frame = +2
Query: 248 VQKKKYMQELIKTVENRIIEIKNELQNLECSQCHFVGNGVAREILTPD-NTQLNDLPLVF 424
+ K+ K +E++ ++++ ++Q L + E + + +L
Sbjct: 337 IASKEAFSSSRKQIEDQAVQMQKQVQELSGQRLLLSSFNQNLEAARLEIQGKAKELNAAQ 396
Query: 425 KRCDEIETLIKETYKKIQGKKAIDDLTKPKDDQSIKNK---TLVKAINWWEDDYESDLSQ 595
RC E+E+L+ + +K++ +A+ LTK ++ K K L KA+ E+++ + L
Sbjct: 397 SRCHELESLLLQEKEKVESLEAV--LTKERESLEEKTKEVELLQKALVQKENEHSNSLKL 454
Query: 596 ISLEKDE 616
+ +++ E
Sbjct: 455 VEIKESE 461
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 32.7 bits (71), Expect = 0.31
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 3/117 (2%)
Frame = +2
Query: 173 RLSSVLARYSALYNEASECLHNNLQVQKKKYMQELIKTVENRIIEIKNELQNLECSQCHF 352
R +S ++ + L A E L Q + IK E R +IKNE+ N E + HF
Sbjct: 436 RDTSCISPFPLLTKNAVESLRYRAQDVARSVTTRDIK--EARRQDIKNEILNSEKLKAHF 493
Query: 353 VGNGVAREILTPDNTQLN-DLPLVFKRCDE--IETLIKETYKKIQGKKAIDDLTKPK 514
N ++L D N ++P + E I+ KE ++ +A D+ KP+
Sbjct: 494 DENPRDLDLLKHDKLLSNKEIPAHLRDVPEYLIDPTTKEASNVVKLSRAAMDIDKPR 550
>09_04_0528 - 18348071-18348136,18348477-18351209
Length = 932
Score = 32.3 bits (70), Expect = 0.41
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Frame = +2
Query: 89 LNSLEALLRTDLNYQKKAHDKQLCEAVLRLSSVLARYSALYNEASECLHNNLQV----QK 256
L +L L + Y + +H QLC ++ ++ + + NE L ++L + +K
Sbjct: 712 LGNLSQLRSLCITYVRSSHCAQLCNSLSKMQHLTRLHIRAMNEDEVLLLDDLMLPNPLEK 771
Query: 257 KKYMQELIK-TVENRIIEIK-NELQNLECSQCHFVGNGVA 370
+ +L K T+E+ NEL LE S+C N VA
Sbjct: 772 LDLLGQLSKGTLESPFFTTHGNELLQLELSRCQLTVNLVA 811
>12_02_0202 - 15465885-15466241,15466539-15468122
Length = 646
Score = 30.7 bits (66), Expect = 1.3
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Frame = +2
Query: 185 VLARYSALYNEASECLHNNLQVQKKKYMQELIKTVENRIIEIKNELQNLECSQCHFVGN- 361
+L R A Y E ECL NL+ K M +L T+ ++ +L + CH V
Sbjct: 500 ILERLCANYTEDDECL-QNLKGVMTKAMPKLCVTICDKFTFSYQDLNQQFYATCHGVDKF 558
Query: 362 GVAREILTPDNTQLNDLPLVFKRCDEIETLIKETYKKIQGKKAIDDLTKPKDDQSIKNKT 541
V R++ T ND + R + T + + K +G +DL S+ +KT
Sbjct: 559 SVWRKLKEIVETN-NDPKVDSLRIAQHTTKMVISMMKNEGSYVDEDLQSLMQSLSLASKT 617
Query: 542 L 544
+
Sbjct: 618 M 618
>10_08_1036 + 22470642-22470664,22470850-22471024,22471133-22473766
Length = 943
Score = 30.3 bits (65), Expect = 1.7
Identities = 47/234 (20%), Positives = 106/234 (45%), Gaps = 8/234 (3%)
Frame = +2
Query: 41 QSKMSSNFYFIKWKNVLNSLEALLR--TDLNYQKKAHDKQLCEAVLRLSSVLARYSALYN 214
+++ +N +WK SL+A L + LN + + L + S+L +
Sbjct: 281 RAEADANLAAQEWKTKAESLQARLHELSSLNKSNEDSLQSLTSSFDECKSMLQHEQSQVV 340
Query: 215 EASECLHNNLQVQKKKYMQELIKTVENRIIEIK--NELQNL--ECSQCHFVGNGVAREIL 382
+ E + ++L+ + ++Y + ++T + K ++LQ + H + N ++++
Sbjct: 341 QLKEKV-SSLEKEAREYKECFLETNRRLDVATKESHQLQATIDRLTSQHKLLNEAHQQVV 399
Query: 383 TPDNTQLNDLPLVFKRCDEIETLIKETY-KKIQGKKAIDDLTKPKDDQSIKNKTLVKAIN 559
T + T + + L+ + IE + ++ + KKA++DL + S + + + +
Sbjct: 400 TNEKTVNSQISLLSQDKIRIEQELDGARDERDKAKKAVEDLAAALREVSSEAREAKERVL 459
Query: 560 WWEDDYESDLSQISLEKDEDKISEDIMKSRYFIDMIKSH-EKSRQTISLMRSRA 718
+ + +S QIS K E K ++D + + +D KS E +T+ + S A
Sbjct: 460 AKQTELDSAQLQISELKAEMKNAQD--RYQLMLDESKSEVECISKTVEKLGSEA 511
>05_06_0101 -
25581800-25581943,25582030-25582095,25582268-25582390,
25582635-25582722,25582823-25582920,25583088-25583147,
25583228-25583288,25583374-25583505,25583957-25584167,
25584515-25584648,25584907-25584989,25585077-25585142,
25585552-25585607,25585701-25585800,25586313-25586421,
25586499-25586653,25586767-25586937,25587129-25587212,
25587261-25587345,25587431-25587477,25587912-25588124
Length = 761
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +2
Query: 302 IEIKNELQNLECSQCHFVGNGVAREILTPDNTQLNDLPLVFKRCD--EIETLIKETYKKI 475
I + +E L+ Q H N + N L +L K E+E ++K
Sbjct: 400 INLPDENGRLQILQIHT--NKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYA 457
Query: 476 QGKK-AIDDLTKPKDDQSIK 532
++ ++DDLTKP D++SIK
Sbjct: 458 LNRQISMDDLTKPLDEESIK 477
>10_05_0004 +
7717748-7717798,7718107-7718317,7719424-7720079,
7721296-7721469,7721562-7721678,7722820-7722999,
7723244-7723290,7724068-7724401
Length = 589
Score = 29.9 bits (64), Expect = 2.2
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Frame = +2
Query: 110 LRTDLNYQKKAHDKQLCEAVLRLSSVLARYSALYNEASECLHNNLQ---VQKKKYM---Q 271
L+ LN+ K+A+D CE V S L EA E L + LQ ++K Y+ +
Sbjct: 351 LKEMLNHAKEANDMHACE-------VFGEKSILTTEARE-LQSRLQRLSDERKNYLVVIE 402
Query: 272 ELIKTVENRIIEIKNELQNLE 334
E+ +T+E+R++ + E+ E
Sbjct: 403 EIRQTLEHRLVAAQQEIDAAE 423
>08_01_0339 -
3003626-3004070,3004467-3004636,3004907-3005020,
3005592-3005704,3005848-3005926
Length = 306
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/66 (24%), Positives = 35/66 (53%)
Frame = +2
Query: 383 TPDNTQLNDLPLVFKRCDEIETLIKETYKKIQGKKAIDDLTKPKDDQSIKNKTLVKAINW 562
TP +T+ +DLP+ + D +KE+ K++++ K K++Q +K + ++
Sbjct: 242 TPSDTEKDDLPVSSQLLDNNTATMKES-SSTDISKSVENYNKFKEEQELKLQEWLRQSEE 300
Query: 563 WEDDYE 580
+D+ E
Sbjct: 301 ADDNKE 306
>01_06_0873 + 32617428-32617532,32618166-32618234,32619195-32619380,
32619687-32619776,32620389-32620462,32621149-32621260,
32621413-32621468,32621826-32621880,32621965-32622021,
32622696-32622797,32623467-32623547,32623756-32623808,
32625245-32625314,32626540-32626603,32627339-32627487,
32627564-32627719,32628011-32628108,32628763-32628847,
32628932-32628997,32629066-32629125,32629408-32629494,
32630307-32630360,32630538-32630576,32630651-32630779,
32630859-32630911,32630984-32631032,32632240-32632298,
32633111-32633259,32633338-32633492,32633719-32633847,
32633932-32634017,32634220-32634335,32634429-32634541,
32635335-32635458,32635540-32635658,32636289-32636490,
32636586-32636757,32637852-32638176,32638442-32638529,
32638970-32639059,32639169-32639370,32639681-32639705
Length = 1450
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 80 KNVLNSLEALLRTDLNYQKKAHDKQLCEAVLRLSSVLARYSALYNE 217
K+VL+ E +L+T NY+ + DK E + L + + +L+N+
Sbjct: 1011 KSVLDIYELVLQTSPNYKNDSADKVKQEVLRGLGDLYVQAQSLFND 1056
>06_01_1090 - 8945909-8946125,8946607-8947562,8947733-8949835
Length = 1091
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 494 DDLTKPKDDQSIKNKTLVKAINWWEDDYES--DLSQISLEKDEDKISE 631
+DL + DDQ+++ K NW+ Y S +L++I + + KI E
Sbjct: 66 EDLLRESDDQALRQKMEDADRNWFGKRYSSILNLAKILIRGSKTKIKE 113
>06_01_0426 +
3050332-3050526,3050864-3051116,3051923-3051980,
3052054-3052105,3052601-3052678,3053012-3053188,
3053594-3053806
Length = 341
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/86 (22%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +2
Query: 452 IKETYKKIQGKKAIDDLTKPKDDQSIKNKTLVKAINWWEDDYESDLSQIS--LEKDEDKI 625
++E Y++++ +K ++ P Q + L + IN + + L + L+K+EDK+
Sbjct: 141 MREQYEELKSQK-LECGAYPTYTQHLYPARLEERINMDKTRLNTLLKHATKELQKNEDKL 199
Query: 626 SEDIMKSRYFIDMIKSHEKSRQTISL 703
SE+ + + + DM+ + + S + +++
Sbjct: 200 SEERSRRKEYEDMVMAIQASIEQLTM 225
>05_01_0146 - 953957-956278,956468-956786,957185-957213
Length = 889
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 482 KKAIDDLTKPKDDQSIKNKTLVKAINWWEDDYESDLSQI 598
K+A++DLT ++S K K + EDD+E L+QI
Sbjct: 498 KRAVEDLTAALSEESDKAKEAHERYLSKEDDHEHALAQI 536
>02_02_0565 + 11550071-11550909,11551603-11553133,11553205-11553537
Length = 900
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 270 CIYFFFCTCKLLCKHSEASLYRAEYLAKTL 181
CI +FC C++ + S+ L A +LA TL
Sbjct: 69 CIDLYFCRCRVRLQLSDGVLSWARHLASTL 98
>12_02_0953 - 24736642-24736673,24737104-24737188,24737267-24737386,
24737484-24737549,24737629-24737799,24737901-24737999,
24738075-24738186,24738282-24738343,24738412-24738483,
24738583-24738681,24738764-24738997,24739104-24739178,
24739299-24739386,24739478-24739638,24739734-24739841,
24739934-24741922,24742007-24742279,24742957-24743295,
24743449-24745038,24745166-24745241,24745333-24745412,
24745614-24745679,24745761-24745830,24745899-24746134,
24746149-24746319,24746915-24747097,24747176-24747241,
24747326-24747389,24747472-24747530,24747612-24747699,
24747799-24747891,24747956-24748116,24748215-24748307,
24748405-24748518,24748654-24748773,24748852-24748935,
24749016-24749171,24749518-24750154,24752874-24752929
Length = 2815
Score = 27.9 bits (59), Expect = 8.9
Identities = 28/110 (25%), Positives = 50/110 (45%)
Frame = +2
Query: 116 TDLNYQKKAHDKQLCEAVLRLSSVLARYSALYNEASECLHNNLQVQKKKYMQELIKTVEN 295
T+LN + A +K++ + ++LAR +++YNE S L + K + K E
Sbjct: 1750 TELNSRLDAFEKKILHLQAQEEAMLARSNSMYNELS-ILVEEIDATNKSALATESKEKE- 1807
Query: 296 RIIEIKNELQNLECSQCHFVGNGVAREILTPDNTQLNDLPLVFKRCDEIE 445
E++++L E C N + ++I+ D L + K C E E
Sbjct: 1808 ---ELRHQLD--EALLC----NAMLKDIIQED-VDLPQVNNYMKGCSEFE 1847
>10_08_1045 -
22535516-22535593,22535681-22535756,22535843-22535946,
22536048-22536176,22536539-22536700,22537029-22537259,
22537345-22537428,22537515-22537583,22537671-22537739,
22537827-22537889,22537913-22538052,22538527-22539097
Length = 591
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 158 TVVYRVPFSGNLDLFGVMLLKNSEHF 81
TV+ +P G+L G+ +LKN EH+
Sbjct: 530 TVIQNLPLQGDLVSCGLFVLKNMEHW 555
>01_07_0105 - 41104655-41104851,41105818-41107150
Length = 509
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/77 (23%), Positives = 35/77 (45%)
Frame = +2
Query: 485 KAIDDLTKPKDDQSIKNKTLVKAINWWEDDYESDLSQISLEKDEDKISEDIMKSRYFIDM 664
KA +D K K+D + ++A EDD E+ L++ + D+D+ D + +
Sbjct: 204 KAEEDKNKNKNDDEVVATATMEAAVEEEDDDEAALAEDDDDDDDDEQPNDDESITFAVAP 263
Query: 665 IKSHEKSRQTISLMRSR 715
+ ++ T R+R
Sbjct: 264 VAEDDEGSVTFPGARAR 280
>01_06_0360 - 28729006-28729446,28729810-28730258,28730499-28731480
Length = 623
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -3
Query: 258 FFCTCKLLCKHSEASLYRAEYLAKTLDRRSTASHSCLSCAFFW 130
F C CK+ H+ L++ EY T+ T+ SC + W
Sbjct: 455 FSCKCKIKGSHTIVGLWKHEYWQPTM---KTSDWYTKSCTYSW 494
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,400,010
Number of Sequences: 37544
Number of extensions: 277968
Number of successful extensions: 783
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -