Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30a22
         (763 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000498D48 Cluster: glutamate dehydrogenase; n=1; En...    36   1.4  
UniRef50_Q7NAI9 Cluster: tRNA(Ile)-lysidine synthase (EC 6.3.4.-...    35   2.5  
UniRef50_Q54G75 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  

>UniRef50_UPI0000498D48 Cluster: glutamate dehydrogenase; n=1;
           Entamoeba histolytica HM-1:IMSS|Rep: glutamate
           dehydrogenase - Entamoeba histolytica HM-1:IMSS
          Length = 930

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -3

Query: 191 TWIASDFDVCLFSRTTLLSHCYTLAYLQQIKKPD 90
           T I  D +  LF +T +   CY LAY QQ K  D
Sbjct: 397 TVINKDMETALFQKTNMFGECYNLAYTQQKKNKD 430


>UniRef50_Q7NAI9 Cluster: tRNA(Ile)-lysidine synthase (EC 6.3.4.-)
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase); n=1; Mycoplasma
           gallisepticum|Rep: tRNA(Ile)-lysidine synthase (EC
           6.3.4.-) (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) - Mycoplasma
           gallisepticum
          Length = 287

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 17/57 (29%), Positives = 33/57 (57%)
 Frame = +2

Query: 86  WSLVFLFAVNRLVYNSVTVMWFVKTNIRQNHSRSKSIVLRPRRPNHFRVPQRLKANL 256
           W   +L  +N L Y ++  +WF K NI+ +  ++++I+   ++ N+ R   RLKA +
Sbjct: 219 WDCNYLDLINSLEYYNLLYLWFSKNNIKYSKQKAENILSFLQKKNNKRF--RLKAGV 273


>UniRef50_Q54G75 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1886

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = -2

Query: 384 APASSITSFPTNNTHLTNYEGHIELSYCSNVDDVTIWFR 268
           +P+SS +S  ++NT L+N    I  +Y SN+ DV + FR
Sbjct: 208 SPSSSSSSSSSSNTLLSNSNEEINTAYQSNLSDVILLFR 246


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,091,342
Number of Sequences: 1657284
Number of extensions: 14025522
Number of successful extensions: 34645
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34638
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)