Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30a22
         (763 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr...    31   0.89 
Z66498-5|CAA91294.2|  513|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z54327-14|CAA91124.2|  513|Caenorhabditis elegans Hypothetical p...    30   2.1  

>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical
           protein F52B5.3 protein.
          Length = 1425

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +1

Query: 265 CSEPDGDIINVRAIRQF 315
           CS PDGDII+ RA+RQ+
Sbjct: 453 CSTPDGDIIDERAMRQY 469


>Z66498-5|CAA91294.2|  513|Caenorhabditis elegans Hypothetical
           protein C26D10.6a protein.
          Length = 513

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +1

Query: 223 LSCPSKTQSKLVR*CSEPDGDIIN-VRAIRQFNVSFIISQVSV 348
           + C SK    LVR CS PDGD +  V   +  + +FII++ S+
Sbjct: 387 VGCSSKYSMNLVRDCSLPDGDELTCVANFKHEDNTFIIARDSL 429


>Z54327-14|CAA91124.2|  513|Caenorhabditis elegans Hypothetical
           protein C26D10.6a protein.
          Length = 513

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +1

Query: 223 LSCPSKTQSKLVR*CSEPDGDIIN-VRAIRQFNVSFIISQVSV 348
           + C SK    LVR CS PDGD +  V   +  + +FII++ S+
Sbjct: 387 VGCSSKYSMNLVRDCSLPDGDELTCVANFKHEDNTFIIARDSL 429


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,073,745
Number of Sequences: 27780
Number of extensions: 355910
Number of successful extensions: 919
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)