Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30a16
         (803 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    28   0.39 
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   4.8  

>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 27.9 bits (59), Expect = 0.39
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +2

Query: 86  GNIRSNNNYVRKCEERNQE*EFNGTPSK--SQERHAHPGH 199
           G+   NNNY+   +++ Q       P +   Q+ H+HP H
Sbjct: 293 GSATDNNNYILAQQQQQQHHHHQHQPQQQHQQQYHSHPHH 332


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +3

Query: 144 KSSMERLQSLKKDMHTLGMELVALGKENHDQ 236
           K  ME + + KK++ T   + VA+G+ + D+
Sbjct: 265 KQEMEAILARKKELETSKAKQVAIGQRSTDE 295


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 806,897
Number of Sequences: 2352
Number of extensions: 17432
Number of successful extensions: 39
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84823812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)