Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30a12
         (747 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domai...    26   1.1  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   4.3  

>DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 161

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
 Frame = +2

Query: 230 NCLCTRRPAFPARDICQR*TSYIY-QMKFGNT---QRQKKRDK 346
           NC    R A+P RD C R  + I+  +  GN    ++ KKRD+
Sbjct: 109 NCAVRIRHAYPCRDECSRCVTTIHTSVISGNVFHRKQSKKRDE 151


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 320 CFRISFDRCRKFIFGKY 270
           C+ +SF RCR  + G Y
Sbjct: 815 CYCVSFSRCRSPVTGTY 831


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,565
Number of Sequences: 2352
Number of extensions: 13620
Number of successful extensions: 22
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)