Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30a12
         (747 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    23   4.0  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    22   5.3  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.3  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   7.0  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    21   9.3  

>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 4   HFHNRYTNYENISLY 48
           H +N Y NY N  LY
Sbjct: 313 HNNNNYNNYNNKKLY 327


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 10  HNRYTNYENISLYK*NHCYGAFSSFKSILYNI 105
           HN   NY N +    N+    ++++K + YNI
Sbjct: 91  HNN-NNYNNNNYNNYNYNNNNYNNYKKLYYNI 121


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 586 SQSVENFRRLRLCAKLFVELYDELGEFGDLC 678
           +Q+V  F R      + +E     GEFGD+C
Sbjct: 618 NQAVREFAREIDAGYITIEAIIGGGEFGDVC 648


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = -1

Query: 267 LAGKAGRRVQRQLITMLRLLLDQQHLITSFSCSISFDRDYLS 142
           + GK      RQ+   +RLL+  + L       +  D DY S
Sbjct: 52  VGGKNYEHSTRQVEDFVRLLMSSEELRLFDKIRVFLDEDYSS 93


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +1

Query: 454 QDKHEHSKEGCVC*QLQERLRRK 522
           QDKHE S    VC     R R K
Sbjct: 26  QDKHEQSDTLYVCEFCNRRYRTK 48


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,814
Number of Sequences: 438
Number of extensions: 3913
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)