Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30a10
(732 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 388 e-109
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 277 1e-75
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 254 1e-68
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 250 2e-67
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 233 1e-62
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 228 5e-61
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 181 1e-46
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 180 2e-46
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 175 5e-45
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 167 2e-42
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 163 2e-41
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 157 1e-39
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 154 1e-38
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 151 8e-38
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 146 2e-36
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 146 4e-36
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 141 8e-35
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 127 2e-30
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 116 5e-27
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 108 9e-25
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 71 1e-13
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 51 2e-07
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 37 0.003
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 31 0.13
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 31 0.17
SPAC1556.08c ||SPAC1F12.01c|protein kinase activator Snf4 |Schiz... 29 0.68
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 29 0.90
SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subun... 29 0.90
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 29 0.90
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 28 1.2
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 28 1.2
SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A |S... 28 1.6
SPAC630.09c |mug58||glycerate kinase |Schizosaccharomyces pombe|... 27 2.8
SPAC926.09c |fas1||fatty acid synthase beta subunit Fas1|Schizos... 27 3.6
SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr 2|... 27 3.6
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 27 3.6
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 27 3.6
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 26 4.8
SPAC6G10.07 |||nuclear cap-binding complex large subunit |Schizo... 26 4.8
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 26 4.8
SPAC23D3.02 |rfc2||DNA replication factor C complex subunit Rfc2... 26 4.8
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 6.4
SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomy... 26 6.4
SPAC20G8.08c |fft1||fun thirty related protein Fft1|Schizosaccha... 26 6.4
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 26 6.4
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 25 8.4
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 25 8.4
SPAC3A12.05c |taf2||TATA-binding protein associated factor Taf2|... 25 8.4
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 388 bits (954), Expect = e-109
Identities = 184/229 (80%), Positives = 203/229 (88%)
Frame = +2
Query: 2 FVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREM 181
F+RVGI PPKG LLYGPPGTGKTLLARAVA+ L NFLKVVSSAIVDKYIGESAR+IREM
Sbjct: 158 FLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREM 217
Query: 182 FNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKIIMA 361
F YA++H+PC+IFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD LGQ KIIMA
Sbjct: 218 FGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMA 277
Query: 362 TNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEAVVKLSDTF 541
TNRPDTLDPALLRPGRLDRKIEIPLPNE R+EILKIH ++K GE+DYEA+VKL+D
Sbjct: 278 TNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGT 337
Query: 542 NGADLRNVCTEAGLFAIRAEREYIIQEDLMKAVRKVADNKKLESKLDYK 688
NGADLRNV TEAG AI+ +R+Y+IQ DLM A RKVAD KKLE +DY+
Sbjct: 338 NGADLRNVVTEAGFIAIKEDRDYVIQSDLMSAARKVADLKKLEGTIDYQ 386
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 277 bits (679), Expect = 1e-75
Identities = 125/229 (54%), Positives = 170/229 (74%), Gaps = 1/229 (0%)
Frame = +2
Query: 2 FVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREM 181
FV++GI PPKG +LYGPPGTGKTL ARAVA++ DA F++V+ S +V KY+GE AR++RE+
Sbjct: 205 FVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVREL 264
Query: 182 FNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKIIMA 361
F AR + CIIF DEIDAIGG RF +G D E+QRT++EL+ Q+DGFD G +K++ A
Sbjct: 265 FEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFA 324
Query: 362 TNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEAVVKLSDTF 541
TNRP+TLD AL+RPGR+DRK+E LP+ + R IL+IHA +A ++ +E + +L +
Sbjct: 325 TNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQ 384
Query: 542 NGADLRNVCTEAGLFAIRAEREYIIQEDLMKAVRKVA-DNKKLESKLDY 685
GA+LR+VCTEAG+FAIRA R ++D + AV+KV N+K S DY
Sbjct: 385 TGAELRSVCTEAGMFAIRARRRVATEKDFLDAVQKVVKGNQKFSSTADY 433
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 254 bits (621), Expect = 1e-68
Identities = 122/217 (56%), Positives = 159/217 (73%), Gaps = 1/217 (0%)
Frame = +2
Query: 2 FVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREM 181
F +GI PKG LLYGPPGTGKTLLARAVA D F++V S +V KYIGE +R++RE+
Sbjct: 171 FESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVREL 230
Query: 182 FNYARDHQPCIIFMDEIDAIGGRRF-SEGTSADREIQRTLMELLNQMDGFDSLGQVKIIM 358
F AR+H P IIFMDEID+IG R S G S D E+QRT++ELLNQ+DGF++ +K+IM
Sbjct: 231 FVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIM 290
Query: 359 ATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEAVVKLSDT 538
ATNR D LDPALLRPGR+DRKIE P P+ +AR EIL+IH+ + +D +++ + +
Sbjct: 291 ATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNG 350
Query: 539 FNGADLRNVCTEAGLFAIRAEREYIIQEDLMKAVRKV 649
+GA+L+ VCTEAG+FA+R R ++ QED AV KV
Sbjct: 351 ASGAELKGVCTEAGMFALRERRVHVTQEDFELAVAKV 387
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 250 bits (611), Expect = 2e-67
Identities = 115/220 (52%), Positives = 162/220 (73%)
Frame = +2
Query: 2 FVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREM 181
F ++G+ PPKGCL++GPPGTGKTLLARA A+Q +A FLK+ + +V +IG+ A+L+R+
Sbjct: 211 FRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDA 270
Query: 182 FNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKIIMA 361
F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLNQ+DGF S +VK+I A
Sbjct: 271 FALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAA 330
Query: 362 TNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEAVVKLSDTF 541
TNR DTLDPALLR GRLDRK+E PLPNE+AR+ IL+IH+ +A ++++E + + +D +
Sbjct: 331 TNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEY 390
Query: 542 NGADLRNVCTEAGLFAIRAEREYIIQEDLMKAVRKVADNK 661
NGA L++VC EAG+ A+R I E M + +V K
Sbjct: 391 NGAMLKSVCVEAGMIALRQGDTKINHEHFMDGILEVQMRK 430
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 233 bits (571), Expect = 1e-62
Identities = 108/221 (48%), Positives = 156/221 (70%), Gaps = 1/221 (0%)
Frame = +2
Query: 2 FVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREM 181
+ +GI PPKG +LYG PGTGKTLLA+AVA+Q A FL+VV S ++ KY+G+ RL+R++
Sbjct: 217 YEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQL 276
Query: 182 FNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD-SLGQVKIIM 358
FN A +H P I+F+DEIDAIG +R+ + A+REIQRT++ELLNQ+DGFD S +K+IM
Sbjct: 277 FNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIM 336
Query: 359 ATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEAVVKLSDT 538
ATNR LDPAL+RPGR+DRKI P+E + +I IH S + +++ E +++ D
Sbjct: 337 ATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDD 396
Query: 539 FNGADLRNVCTEAGLFAIRAEREYIIQEDLMKAVRKVADNK 661
+GA+++ + +EAGL A+R R ++ +D +A KV K
Sbjct: 397 LSGAEIKAIVSEAGLLALRERRMRVVMDDFRQAREKVLKTK 437
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 228 bits (558), Expect = 5e-61
Identities = 115/229 (50%), Positives = 149/229 (65%), Gaps = 2/229 (0%)
Frame = +2
Query: 8 RVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFN 187
++GI PP+G LLYGPPGTGKT+L +AVA+ ANF++VV S V KY+GE R++R++F
Sbjct: 162 QIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFR 221
Query: 188 YARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKIIMATN 367
AR++ P IIF+DEIDAI +RF T ADRE+QR L+ELL QMDGFD VK+IMATN
Sbjct: 222 MARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGFDQGANVKVIMATN 281
Query: 368 RPDTLDPALLRPGRLDRKIEIP--LPNEQARLEILKIHASPIAKHGEMDYEAVVKLSDTF 541
R DTLDPALLRPGRLDRKIE P Q RL I A + E+D + + D
Sbjct: 282 RADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLS-PEVDLDTFIMRPDAS 340
Query: 542 NGADLRNVCTEAGLFAIRAEREYIIQEDLMKAVRKVADNKKLESKLDYK 688
+GA + + +AGL A+R R I+Q D+ +A + +E YK
Sbjct: 341 SGAQIAAIMQDAGLLAVRKSRGVILQSDIEEAYARAVKPTDMEQFAFYK 389
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 181 bits (440), Expect = 1e-46
Identities = 87/202 (43%), Positives = 132/202 (65%)
Frame = +2
Query: 2 FVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREM 181
F R+G+ PPKG LLYGPPG KT+ A+A+A++ NF+ V + DK++GES R +R++
Sbjct: 574 FSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQV 633
Query: 182 FNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKIIMA 361
F AR P +IF DEIDA+ R E S+D R + LLN++DG ++L V ++ A
Sbjct: 634 FQKARQASPSVIFFDEIDALTANR-GEDNSSD----RVVAALLNELDGIEALRNVLVLAA 688
Query: 362 TNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEAVVKLSDTF 541
TNRPD +DPAL+RPGRLDR + + PN +AR +I+KI A + ++D + + + ++
Sbjct: 689 TNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAEKTEGC 748
Query: 542 NGADLRNVCTEAGLFAIRAERE 607
+GA++ +C EAGL A+ + E
Sbjct: 749 SGAEVVALCQEAGLIAMHEDLE 770
Score = 167 bits (406), Expect = 1e-42
Identities = 88/204 (43%), Positives = 132/204 (64%), Gaps = 1/204 (0%)
Frame = +2
Query: 17 ITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYAR 196
I PP+G LLYGPPGTGKT++ RAVA++ +A + ++V KY+GE+ +R++F AR
Sbjct: 310 IMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDAR 369
Query: 197 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKIIMATNRPD 376
HQP IIF+DEIDA+ +R + + A+ TL+ LL DG + G+V +I ATNRP+
Sbjct: 370 AHQPSIIFIDEIDALAPKRTEDVSEAESRAVATLLTLL---DGMANAGKVVVIAATNRPN 426
Query: 377 TLDPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKH-GEMDYEAVVKLSDTFNGAD 553
++D AL RPGRL+++IEI +P++ ARL+I+K+ S + + E + + + GAD
Sbjct: 427 SIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLASRTHAYVGAD 486
Query: 554 LRNVCTEAGLFAIRAEREYIIQED 625
L V EA L AI+ R +Q+D
Sbjct: 487 LAAVVREAALRAIK--RTISLQKD 508
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 180 bits (437), Expect = 2e-46
Identities = 94/211 (44%), Positives = 138/211 (65%), Gaps = 3/211 (1%)
Frame = +2
Query: 2 FVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREM 181
F+R G+TP KG L +GPPGTGKTLLA+A+A++ ANF+ V ++ + GES +R++
Sbjct: 523 FLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDI 582
Query: 182 FNYARDHQPCIIFMDEIDAIG-GRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKIIM 358
F+ AR PC++F+DE+D+I R S G S + R + +LL +MDG +S V +I
Sbjct: 583 FDKARAAAPCVVFLDELDSIAKARGASAGDSGGGD--RVVNQLLTEMDGVNSKKNVFVIG 640
Query: 359 ATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEIL--KIHASPIAKHGEMDYEAVVKLS 532
ATNRPD +DPAL+RPGRLD+ I +PLP+E+AR IL ++ +P+A+ ++D AV K +
Sbjct: 641 ATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAE--DVDLRAVAKAT 698
Query: 533 DTFNGADLRNVCTEAGLFAIRAEREYIIQED 625
F+GADL V A AI+ E I+ +
Sbjct: 699 HGFSGADLEFVVQRAVKLAIKDSIEEDIKRE 729
Score = 170 bits (413), Expect = 2e-43
Identities = 88/213 (41%), Positives = 135/213 (63%), Gaps = 1/213 (0%)
Frame = +2
Query: 2 FVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREM 181
F +GI PP+G L+YGPPGTGKTL+ARAVA++ A F + I+ K GES +R+
Sbjct: 250 FKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKA 309
Query: 182 FNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKIIMA 361
F A + P IIF+DEID+I +R E T+ + E +R + +LL MDG + V ++ A
Sbjct: 310 FEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEVE-RRVVSQLLTLMDGMKARSNVVVMAA 366
Query: 362 TNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEAVVKLSDTF 541
TNRP+++DPAL R GR DR++++ +P+ RLEIL+IH + ++D E + + +
Sbjct: 367 TNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGY 426
Query: 542 NGADLRNVCTEAGLFAIRAEREYI-IQEDLMKA 637
G+DL ++C+EA + IR + + I + ED + A
Sbjct: 427 VGSDLASLCSEAAMQQIREKMDMIDLDEDEIDA 459
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 175 bits (426), Expect = 5e-45
Identities = 93/229 (40%), Positives = 133/229 (58%), Gaps = 3/229 (1%)
Frame = +2
Query: 2 FVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREM 181
+ R+G P+G +L GPPGTGKTLLA+A A + + FL V S ++ ++G +R++
Sbjct: 321 YERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDL 380
Query: 182 FNYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQMDGFDSLGQVKIIM 358
F AR + PCIIF+DEIDAIG R G ++ E + TL +LL +MDGF S + +
Sbjct: 381 FATARKNAPCIIFIDEIDAIGKARGRGGQFGSNDERESTLNQLLVEMDGFTSSEHIVVFA 440
Query: 359 ATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEA--VVKLS 532
TNRPD LDPALLRPGR DR+I I P+ R +I K+H I +D A + L+
Sbjct: 441 GTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNIDLIAKRLAVLT 500
Query: 533 DTFNGADLRNVCTEAGLFAIRAEREYIIQEDLMKAVRKVADNKKLESKL 679
F GAD+ NVC E L A R+ + +A+ +V + +S++
Sbjct: 501 SGFTGADIMNVCNEGALIAARSNSNEVQMVHFEQAIERVTAGLEKKSRV 549
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 779
Score = 167 bits (405), Expect = 2e-42
Identities = 85/198 (42%), Positives = 124/198 (62%), Gaps = 2/198 (1%)
Frame = +2
Query: 11 VGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNY 190
VGI+ P G LL+GPPG GKTLLA+AVA++ ANF+ + +++KY+GES R +R++F
Sbjct: 521 VGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLR 580
Query: 191 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKIIMATNR 370
AR PC+IF DE+DA+ RR + A + T LL ++DG V +I ATNR
Sbjct: 581 ARASSPCVIFFDELDAMVPRRDDSLSEASSRVVNT---LLTELDGLSDRSGVYVIAATNR 637
Query: 371 PDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEAVVK--LSDTFN 544
PD +DPA+LRPGRLD+ + + LP+ R+EILK H E++ + + + F+
Sbjct: 638 PDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLGRDERCSNFS 697
Query: 545 GADLRNVCTEAGLFAIRA 598
GADL + EA + A+R+
Sbjct: 698 GADLAALVREAAVTALRS 715
Score = 153 bits (370), Expect = 3e-38
Identities = 77/195 (39%), Positives = 123/195 (63%), Gaps = 1/195 (0%)
Frame = +2
Query: 14 GITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYA 193
GI PP+G LL+GPPG GKT+LA A+A++L F+ + + +IV GES + +RE+F A
Sbjct: 204 GIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEA 263
Query: 194 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQ-VKIIMATNR 370
+ PC++F+DEIDA+ +R S +R I + ++++ + G+ V +I ATNR
Sbjct: 264 KSLAPCLMFIDEIDAVTPKRESAQREMERRIVAQFLTCMDELSFEKTDGKPVLVIGATNR 323
Query: 371 PDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEAVVKLSDTFNGA 550
PD+LD AL R GR DR+I + +P++ AR +IL+ A + G+ D+ + K + + GA
Sbjct: 324 PDSLDSALRRAGRFDREICLTVPSQDAREKILRTMAKGLKLSGDFDFRQLAKQTPGYVGA 383
Query: 551 DLRNVCTEAGLFAIR 595
DL+ + AG+ AI+
Sbjct: 384 DLKALTAAAGIIAIK 398
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 163 bits (397), Expect = 2e-41
Identities = 94/206 (45%), Positives = 126/206 (61%), Gaps = 8/206 (3%)
Frame = +2
Query: 2 FVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV-----SSAIVDKYIGESAR 166
F+ + ITPP+G L +GPPGTGKTL+AR +A+ K+ S + K++GE+ R
Sbjct: 398 FLHLHITPPRGVLFHGPPGTGKTLMARVLAANCSTKNQKISFFLRKGSDCLSKWVGEAER 457
Query: 167 LIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQV 346
+R +F AR QP IIF DEID + R S+ I TL+ L MDG D+ GQV
Sbjct: 458 QLRLLFEEARRVQPSIIFFDEIDGLAPIRSSKQEQTHSSIVSTLLAL---MDGLDTRGQV 514
Query: 347 KIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKI---HASPIAKHGEMDYEA 517
+I ATNRP+ LDPAL RPGR DR+ PLPN+QAR++IL+I H SP K E
Sbjct: 515 VVIGATNRPNDLDPALRRPGRFDREFYFPLPNKQARMKILEINSLHFSP--KIPESYLLH 572
Query: 518 VVKLSDTFNGADLRNVCTEAGLFAIR 595
+ + + + GADL+ +CTEA L A+R
Sbjct: 573 LAESTSGYGGADLKALCTEAALNAVR 598
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 157 bits (382), Expect = 1e-39
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 4/213 (1%)
Frame = +2
Query: 2 FVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREM 181
F R+G P+G LL GPPGTGKT+LARAVA + + F + S + Y+G A+ +RE+
Sbjct: 292 FTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDEMYVGVGAKRVREL 351
Query: 182 FNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF----DSLGQVK 349
F AR P IIF+DE+DAIG +R + + +++TL +LL +DGF D V
Sbjct: 352 FAAARKQAPSIIFIDELDAIGQKRNARDAA---HMRQTLNQLLVDLDGFSKNEDLAHPVV 408
Query: 350 IIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEAVVKL 529
I ATN P++LDPAL RPGR DR I +PLP+ + RL IL H + ++D + +
Sbjct: 409 FIGATNFPESLDPALTRPGRFDRHIHVPLPDVRGRLAILLQHTRHVPLGKDVDLSIIARG 468
Query: 530 SDTFNGADLRNVCTEAGLFAIRAEREYIIQEDL 628
+ F GADL N+ +A ++A + + DL
Sbjct: 469 TSGFAGADLANLINQAAVYASKNLSTAVSMRDL 501
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 154 bits (373), Expect = 1e-38
Identities = 89/204 (43%), Positives = 121/204 (59%), Gaps = 6/204 (2%)
Frame = +2
Query: 2 FVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV-----SSAIVDKYIGESAR 166
F R + PP+G L +GPPGTGKTL+ARA+A+ + KV + + K++GE+ R
Sbjct: 292 FQRFNMQPPRGVLFHGPPGTGKTLMARALAAACSSENKKVSFYMRKGADCLSKWVGEAER 351
Query: 167 LIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQV 346
+R +F A+ QP IIF DEID + R S+ I TL+ L MDG +S GQV
Sbjct: 352 QLRLLFEEAKSTQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLAL---MDGMESRGQV 408
Query: 347 KIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA-SPIAKHGEMDYEAVV 523
II ATNRPD +DPAL RPGR DR+ PLP+ AR +I++IH + E +
Sbjct: 409 IIIGATNRPDAVDPALRRPGRFDREFYFPLPDRDARKKIIEIHTRNWDPPVPEWLCSMLA 468
Query: 524 KLSDTFNGADLRNVCTEAGLFAIR 595
+ S + GADLR +CTEA L +I+
Sbjct: 469 EKSKGYGGADLRALCTEAALNSIK 492
Score = 27.9 bits (59), Expect = 1.6
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 38 LLYGPPGTGKTLLARAVASQLDANFLKVVS-SAIVDKYIGESARLIREMFNYARDHQPCI 214
L+ G G G+T L A+ Q + ++ S ++ I +F R H P I
Sbjct: 606 LICGRKGLGQTALGPAILQQYEGVHVQSFDMSTLLQDSTQSIETSIIHLFLEVRRHTPSI 665
Query: 215 IFMDEID 235
I++ +ID
Sbjct: 666 IYIPDID 672
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 151 bits (367), Expect = 8e-38
Identities = 77/189 (40%), Positives = 116/189 (61%)
Frame = +2
Query: 26 PKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQ 205
P G LL+G PG GKT LA A++S F+ + ++DKYIG+S + +R++F+ A+ +
Sbjct: 640 PTGILLFGYPGCGKTYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAK 699
Query: 206 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKIIMATNRPDTLD 385
PC++F DE D++ RR + T R + ++L QMDG +SL V I+ AT RPD +D
Sbjct: 700 PCVLFFDEFDSVAPRRGQDSTGV---TDRVVNQILTQMDGAESLDGVYIVAATTRPDMID 756
Query: 386 PALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEAVVKLSDTFNGADLRNV 565
PALLRPGRLD+ I LPNE+ RLE+L+ A+ + + L+D + ADL ++
Sbjct: 757 PALLRPGRLDKLIFCDLPNEEERLEVLQKLANRFHIENAAMLKKLSTLTDGYTYADLSSL 816
Query: 566 CTEAGLFAI 592
+A L A+
Sbjct: 817 LYDAHLIAV 825
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 146 bits (355), Expect = 2e-36
Identities = 87/207 (42%), Positives = 126/207 (60%), Gaps = 13/207 (6%)
Frame = +2
Query: 8 RVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSA-IVDKYIGESARLIREMF 184
++GI KG LLYGPPGTGKTL+AR + L+A K+V+ I++KY+G+S +R++F
Sbjct: 298 KLGINHVKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNKYVGQSEENVRKLF 357
Query: 185 NYA-RDHQPC-------IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLG 340
A R+++ II DE+DAI +R S G Q + +LL +MDG D L
Sbjct: 358 ADAEREYRDRGEESGLHIIIFDELDAICKKRGSSGGDTGVGDQ-VVNQLLAKMDGVDQLN 416
Query: 341 QVKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHG----EMD 508
+ +I TNR D +D ALLRPGRL+ +EI LP+E RL+ILKIH S +A +G ++D
Sbjct: 417 NILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVD 476
Query: 509 YEAVVKLSDTFNGADLRNVCTEAGLFA 589
E + L+ F+GA++ + A FA
Sbjct: 477 MEELASLTKNFSGAEIAGLIKSASSFA 503
Score = 35.1 bits (77), Expect = 0.010
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 3/179 (1%)
Frame = +2
Query: 38 LLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARL--IREMFNYARDHQPC 211
LL GP +GKT LA +A + F+K+VS+ + + E+AR+ + +F +
Sbjct: 589 LLSGPIASGKTALAATIALGSEFPFVKLVSAESM-VGMNENARVAHVNRVFEDSYKSPLS 647
Query: 212 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKIIMATNRPDTLDPA 391
+I +DEI+ I G + +TLM L + G +I+AT T+
Sbjct: 648 VIVVDEIERIID-WVPIGPRFSNTLLQTLMVLFKKQ---PPKGHRLLILATTSERTMLSR 703
Query: 392 LLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEA-VVKLSDTFNGADLRNV 565
+ D EI +PN E+ +I S I + + A ++ F G D NV
Sbjct: 704 MDMTQSFD--AEIAVPNVSNVTELDRIIQS-IDSFADSNVRADTLQRLQNFTGTDAVNV 759
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 146 bits (353), Expect = 4e-36
Identities = 77/204 (37%), Positives = 121/204 (59%), Gaps = 4/204 (1%)
Frame = +2
Query: 14 GITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYA 193
G+ P G LLYGPPGTGKTLLA+AVA++L F+ + +++ Y+GES +R +F A
Sbjct: 684 GLKPRSGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKA 743
Query: 194 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF--DSLGQVKIIMATN 367
R+ PC+IF DE+D+I R + S + + R + +LL ++D D+ V +I ATN
Sbjct: 744 RNSSPCVIFFDELDSIAPHRGNSSDSGN-VMDRVVSQLLAELDSISKDNNKYVFVIGATN 802
Query: 368 RPDTLDPALLRPGRLDRKIEIPL-PNEQARLEILKIHASPIAKHGEMDYEAVVK-LSDTF 541
RPD LDP+LLRPGR D+ + + + +E+++ +L+ +D + K F
Sbjct: 803 RPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCHPNF 862
Query: 542 NGADLRNVCTEAGLFAIRAEREYI 613
GAD+ +C++A L AI+ + I
Sbjct: 863 TGADMYALCSDAVLSAIKRKTNEI 886
Score = 32.7 bits (71), Expect = 0.056
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Frame = +2
Query: 38 LLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPC-I 214
LL+G P TGKT VAS A + S D + +MF PC I
Sbjct: 426 LLHGNPFTGKTKAVEEVASLFSAPVFTISSYEFADA-TADHLEAKLDMFVQNVVKSPCAI 484
Query: 215 IFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDS-LGQVKIIMATNRPDTLDPA 391
IF+ ++D + EG +++ LL+++D S G+ +I + + +
Sbjct: 485 IFVKDLDVL-SISSDEGNIVPG--SKSIQILLSKIDLVKSPQGRYIVIGTCHSIEKIPYE 541
Query: 392 LLRPGRLDRKIEIPLPNEQARLEILKIHASPI 487
+L + K +E RLE+LKI+A+ +
Sbjct: 542 ILSESFFELKFSELEMDE--RLELLKIYANNV 571
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 141 bits (342), Expect = 8e-35
Identities = 82/197 (41%), Positives = 125/197 (63%), Gaps = 3/197 (1%)
Frame = +2
Query: 14 GITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYA 193
G P G LLYGPPGTGK+ LA+AVA++ + F + SS +V K++GES RL+R++F A
Sbjct: 158 GRKPWSGILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMA 217
Query: 194 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF--DSLGQVKIIMATN 367
R+ +P IIF+DEID++ G R SEG S +R E L QM+G D G V ++ ATN
Sbjct: 218 REQKPSIIFIDEIDSLCGSR-SEGES--ESSRRIKTEFLVQMNGVGKDESG-VLVLGATN 273
Query: 368 RPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHASPI-AKHGEMDYEAVVKLSDTFN 544
P TLD A+ R R +++I IPLPN AR + +++ I ++ D++ + K++D ++
Sbjct: 274 IPWTLDSAIRR--RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYS 331
Query: 545 GADLRNVCTEAGLFAIR 595
G+D+ V +A + +R
Sbjct: 332 GSDISIVVRDAIMEPVR 348
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 127 bits (306), Expect = 2e-30
Identities = 71/186 (38%), Positives = 107/186 (57%), Gaps = 2/186 (1%)
Frame = +2
Query: 26 PKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQ 205
PKG LLYGPPG GKT+LA+A+A Q A F+ V + DK+ GES +L+ +F AR +
Sbjct: 125 PKGLLLYGPPGCGKTMLAKALAKQSQATFINVSVGLLTDKWFGESNKLVDALFTLARKLE 184
Query: 206 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKIIM--ATNRPDT 379
P IIF+DEID +R A +I+ E ++ DG S GQ ++++ ATNRP
Sbjct: 185 PTIIFIDEIDTFLRQRQRTDHEAMAQIK---AEFMSMWDGLLS-GQSRVLVLGATNRPAD 240
Query: 380 LDPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEAVVKLSDTFNGADLR 559
+D A+ R R+ + IPLPN + R +IL+++ + D+ VV + +G+ ++
Sbjct: 241 IDEAIRR--RMPKVFSIPLPNAEQRRKILELYLKKVPLEANFDWNGVVNATAGLSGSYIK 298
Query: 560 NVCTEA 577
VC A
Sbjct: 299 EVCRSA 304
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 116 bits (278), Expect = 5e-27
Identities = 74/223 (33%), Positives = 125/223 (56%), Gaps = 14/223 (6%)
Frame = +2
Query: 23 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDH 202
P +G LL+GPPGTGKT+LARAVA++ + F + +S++ K++GES +L+R +F A+
Sbjct: 491 PARGMLLFGPPGTGKTMLARAVATESRSVFFSISASSLTSKFLGESEKLVRALFTLAKKL 550
Query: 203 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLG---------QVKII 355
P IIF+DEID++ R S+G + +R E L Q +V ++
Sbjct: 551 SPSIIFVDEIDSLLSARSSDGNEHETS-RRIKTEFLIQWSSLARAAASRQTADHPRVLVL 609
Query: 356 MATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGE-----MDYEAV 520
ATN P +D A R R R+ IPLP+E R ++H + + K+ + D EA+
Sbjct: 610 AATNLPWCIDDAARR--RFVRRTYIPLPDETTR----RLHLNNLLKYQKHSLSLEDIEAI 663
Query: 521 VKLSDTFNGADLRNVCTEAGLFAIRAEREYIIQEDLMKAVRKV 649
VK ++ ++G+DL + +A + +R+ E ++ M+++R +
Sbjct: 664 VKATEYYSGSDLTALAKDAAMGPLRSLGESLLFTK-MESIRPI 705
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 108 bits (259), Expect = 9e-25
Identities = 66/201 (32%), Positives = 110/201 (54%), Gaps = 10/201 (4%)
Frame = +2
Query: 23 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDH 202
P +G LL+GPPGTGKT+LARAVA++ A F + +S++ KY+G+S +L+R +F A+
Sbjct: 411 PVQGMLLFGPPGTGKTMLARAVATEAKATFFSISASSLTSKYLGDSEKLVRALFEVAKRQ 470
Query: 203 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLG---------QVKII 355
+IF+DEID+I R G + +R E L Q + +V ++
Sbjct: 471 TCSVIFVDEIDSILSARNDSGNEHESS-RRLKTEFLIQWSSLTNAAPDKQTGHSPRVLVL 529
Query: 356 MATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK-IHASPIAKHGEMDYEAVVKLS 532
ATN P +D A R R ++ IPLP ++ R + L + + + E D E +V L+
Sbjct: 530 AATNLPWCIDEAARR--RFVKRTYIPLPEKETRYKHLSHLLHNQVHCLTEEDLEELVNLT 587
Query: 533 DTFNGADLRNVCTEAGLFAIR 595
+ ++G+D+ + +A + +R
Sbjct: 588 EGYSGSDITALAKDAAMGPLR 608
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 71.3 bits (167), Expect = 1e-13
Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 1/137 (0%)
Frame = +2
Query: 14 GITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYA 193
GI +G LLYGPPG+GKT A+A +LD + + + +K + + RL + N
Sbjct: 238 GIPYRRGYLLYGPPGSGKTSFLYALAGELDYDICVL---NLAEKGLTDD-RLNHLLSNVP 293
Query: 194 RDHQPCIIFMDEID-AIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKIIMATNR 370
++ ++++D A GR S + T LLN +DG S + I M TN
Sbjct: 294 ---PKAVVLLEDVDSAFQGRERSGEVGFHANV--TFSGLLNALDGVTSSDERIIFMTTNH 348
Query: 371 PDTLDPALLRPGRLDRK 421
P+ LDPAL+RPGR+D K
Sbjct: 349 PEKLDPALVRPGRVDVK 365
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 50.8 bits (116), Expect = 2e-07
Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 12/224 (5%)
Frame = +2
Query: 41 LYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD---------KYIGESARLIREMFNYA 193
L GPPG GKT + +++AS L+ F + + D YIG I +
Sbjct: 576 LVGPPGVGKTSVGKSIASALNREFFRFSVGGLTDVAEIKGHRRTYIGAMPGKIVQALKKV 635
Query: 194 RDHQPCIIFMDEIDAIGGRRFSEGTSADREI---QRTLMELLNQMDGFDSLGQVKIIMAT 364
+ P +I +DEID +G + SA E+ ++ L MD + V +
Sbjct: 636 QTENP-LILIDEIDKVGKSHQGDPASALLELLDSEQNSAFLDYYMDIPLDVSSVLFVCTA 694
Query: 365 NRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEAVVKLSDTFN 544
N DT+ P LL R++ IE+ ++ I K + P AK +A V +SD
Sbjct: 695 NTIDTIPPPLL--DRME-VIELSGYVSAEKVNIAKGYLIPQAKAACGLKDANVNISDDAI 751
Query: 545 GADLRNVCTEAGLFAIRAEREYIIQEDLMKAVRKVADNKKLESK 676
+ E+G+ ++ E I ++ V+++ D + K
Sbjct: 752 KGLISYYAHESGVRNLKKSIEKIFRKTSFSIVKEIDDELNSKEK 795
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 36.7 bits (81), Expect = 0.003
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +2
Query: 38 LLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNY-ARDHQPCI 214
+L+G GTGKT LAR +A + F+++ +++ + + ++ + NY + I
Sbjct: 124 ILWGSAGTGKTTLARLIAVTTKSRFIEISATSTT---VADCRKIFEDSQNYLTLTGRKTI 180
Query: 215 IFMDEI 232
IF+DE+
Sbjct: 181 IFLDEV 186
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 31.5 bits (68), Expect = 0.13
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
Frame = +2
Query: 23 PPKGCLLYGPPGTGKTLLARAVASQL--DAN-FLKVVSSAIVDKYIGESARLIREMFNYA 193
P L GP GTGKTLL +A+AS + D N +++ S ++K+ +RLI Y
Sbjct: 613 PIASFLFCGPSGTGKTLLTKALASFMFDDENAMIRIDMSEYMEKH--SVSRLIGAPPGYV 670
Query: 194 RDHQPCIIFMDEI--DAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKIIMATN 367
H+ +++ F E A E+ L+++L+ DG + GQ +++ A N
Sbjct: 671 -GHEAGGQLTEQLRRRPYSVILFDEIEKAAPEVLTVLLQVLD--DGRITSGQGQVVDAKN 727
Score = 28.3 bits (60), Expect = 1.2
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Frame = +2
Query: 38 LLYGPPGTGKTLLARAVASQL-----DANF-------LKVVSSAIVDKYIGESARLIREM 181
+L G PG GKT +A +A ++ AN L V S K+ GE I+ +
Sbjct: 206 VLIGEPGVGKTSIAEGLARRIIDDDVPANLSNCKLLSLDVGSLVAGSKFRGEFEERIKSV 265
Query: 182 FNYARDHQ-PCIIFMDEIDAIGG 247
+ + P I+F+DE+ + G
Sbjct: 266 LKEVEESETPIILFVDEMHLLMG 288
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 31.1 bits (67), Expect = 0.17
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 5 VRVGITPPKGCLLYGPPGTGKTLLARAVASQL--DANFLKVVSSAIVDKYIGESARLIRE 178
++ G + L+ GPP TGKT +A +A L D F+ + +S + + ++ L++
Sbjct: 58 IQEGRIAGRAILMAGPPSTGKTAIAMGMAQSLGSDTPFVTLSASEVYSLEMSKTEALLQA 117
Query: 179 M 181
+
Sbjct: 118 L 118
>SPAC1556.08c ||SPAC1F12.01c|protein kinase activator Snf4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 334
Score = 29.1 bits (62), Expect = 0.68
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -3
Query: 349 LHLSQGVETIHLVQQLHQGTLDLSIGARAFGKTSPTDGI 233
L++ + V+ +HL+Q LDLS+G + + DG+
Sbjct: 229 LNVYESVDVMHLIQDGDYSNLDLSVGEALLKRPANFDGV 267
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 28.7 bits (61), Expect = 0.90
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 5 VRVGITPPKGCLLYGPPGTGKTLLARAVASQL 100
VR ++ P L+ GPPGTGKT+ + +V L
Sbjct: 401 VRAVLSKPLS-LIQGPPGTGKTVTSASVVYHL 431
>SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subunit
Taf7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 28.7 bits (61), Expect = 0.90
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +2
Query: 176 EMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKII 355
E+ + A+ + I + E + G GTS DR+ Q ++ + MD D GQ++
Sbjct: 227 ELIDQAQLARDSSIALSEDTSFDGMAGLRGTSIDRDDQSVQTDMFDGMDEDDLAGQIEQG 286
Query: 356 MATNRPDT 379
M DT
Sbjct: 287 MLELSQDT 294
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 28.7 bits (61), Expect = 0.90
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 38 LLYGPPGTGKTLLARAVASQL 100
L YGPPGTGKT A A ++
Sbjct: 60 LFYGPPGTGKTSTILACARKI 80
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 28.3 bits (60), Expect = 1.2
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +2
Query: 38 LLYGPPGTGKTLLARAVASQLDANFLK 118
++ GP G+GKT +A+AV+ +L +++
Sbjct: 18 VVIGPAGSGKTTMAKAVSEKLGFEYIE 44
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +2
Query: 29 KGCLLYGPPGTGKTLLARAVA 91
K LL GPPG GKT A VA
Sbjct: 410 KAVLLSGPPGIGKTTAAHLVA 430
>SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 660
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 5 VRVGITPPKGCLLYGPPGTGKTLLARAVASQL 100
V+ I + L++GPPGTGKT + QL
Sbjct: 218 VKFSIAVKELSLIHGPPGTGKTHTLVEIIQQL 249
>SPAC630.09c |mug58||glycerate kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 277
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 47 GPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 151
GP G+GK+ LA A+ ++L VV ++ D Y+
Sbjct: 32 GPQGSGKSTLASALDTELTRKNESVVKFSLDDFYL 66
>SPAC926.09c |fas1||fatty acid synthase beta subunit
Fas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2073
Score = 26.6 bits (56), Expect = 3.6
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 74 LARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCII 217
+ A S++ A+F IVD +IG+ L+ E+ NY ++Q ++
Sbjct: 1874 MVAANPSRVSASFTDAALRFIVD-HIGQQTNLLLEIVNYNVENQQYVV 1920
>SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 2 FVRVGITPPKGCLLY--GPPGTGKTLLARAVASQLDANFLKV 121
F R + G LY G PGTGKT+L V + +++ KV
Sbjct: 182 FFRQHLDANAGGALYVSGAPGTGKTVLLHNVLDHVVSDYPKV 223
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 26.6 bits (56), Expect = 3.6
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 23 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 136
PP + GPPGTGK+ L +++ + + ++ I
Sbjct: 73 PPVIVAVMGPPGTGKSTLIKSLVRRYSKYTISQITGPI 110
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 26.6 bits (56), Expect = 3.6
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Frame = +2
Query: 2 FVRVGITPPKGCLLYGPPGTGK------TLLARAVASQLDANFLKVVSSAIVDKYIGESA 163
F+ +T + + GPPG+GK TL +R + NF SS V ++ +S
Sbjct: 2505 FLNFSLTKNRCVIFCGPPGSGKSMLMLGTLRSRQDVEVIALNFSISTSSKSVVSFLEQST 2564
Query: 164 RLIRE---MFNYARDHQP-CIIFMDEID 235
R ++H+ ++F DEI+
Sbjct: 2565 VYYRSTGMTIMCPKNHEKVLVLFCDEIN 2592
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 47 GPPGTGKTLLARAVASQLDAN 109
GP GTGKT +AV++ L N
Sbjct: 1890 GPAGTGKTETVKAVSAYLGKN 1910
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 26.2 bits (55), Expect = 4.8
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 38 LLYGPPGTGKTLLARAVA 91
++ G PGTGKT LA VA
Sbjct: 12 IICGTPGTGKTTLAEQVA 29
>SPAC6G10.07 |||nuclear cap-binding complex large subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 780
Score = 26.2 bits (55), Expect = 4.8
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 366 LVAMMIFTCPKESKPSIWFNNSIRV 292
L +++ KE+KPS+W +N +R+
Sbjct: 155 LFSLLADAISKETKPSVWGDNFLRI 179
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3
Query: 358 HDDLHLSQGVETIHLVQQLHQGTLDLSIGARAFGKTSPTDGI 233
HD L L + + +H +Q LDL +G + GK+S D I
Sbjct: 593 HDSLQLQEKCDVLHTT--FNQ--LDLYVGTTSVGKSSVLDNI 630
>SPAC23D3.02 |rfc2||DNA replication factor C complex subunit
Rfc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 26.2 bits (55), Expect = 4.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 38 LLYGPPGTGKTLLARAVASQL 100
L YG PGTGKT A++ +L
Sbjct: 56 LFYGSPGTGKTSTILALSREL 76
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.8 bits (54), Expect = 6.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 29 KGCLLYGPPGTGKTLLARAVASQLDANFLKV 121
K LL G PG GKT L A+A + +++
Sbjct: 1560 KPILLEGSPGVGKTSLITALARETGHQLVRI 1590
>SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 454
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 26 PKGCLLYGPPGTGKTLL 76
PKG LYG G GKT L
Sbjct: 118 PKGIYLYGDVGCGKTAL 134
>SPAC20G8.08c |fft1||fun thirty related protein
Fft1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 25.8 bits (54), Expect = 6.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 236 AIGGRRFSEGTSADREIQRTLMELLNQMDGFDSL 337
A G R+ S+G + R++ + E+L D DSL
Sbjct: 325 ATGKRKKSDGRNVGRKLVNSTYEVLQGFDAVDSL 358
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 38 LLYGPPGTGKTLLARAVASQL 100
L+ GPPGTGKT + S L
Sbjct: 1149 LIQGPPGTGKTKTIIGIISAL 1169
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 25.4 bits (53), Expect = 8.4
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 349 DHHGHQQTRHAGPRSAEARKIGQEN 423
DHH + + H R + +RKI Q +
Sbjct: 430 DHHNNDKRAHVSRRHSTSRKIAQSH 454
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.4 bits (53), Expect = 8.4
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 23 PPKGCLLYGPPGTGKTLLARAVASQL 100
P L GP G GKT L +A+A L
Sbjct: 531 PLASFLFLGPTGVGKTALTKALAEFL 556
>SPAC3A12.05c |taf2||TATA-binding protein associated factor
Taf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1174
Score = 25.4 bits (53), Expect = 8.4
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 506 DYEAVVKLSDTFNGADLRNVCTEAGLFAIRAEREYIIQEDLMKAVRKVAD 655
D VV+ S ++ D G + A + I++ED+ KAV K D
Sbjct: 991 DLSPVVRRSLLYSVQDGLGALARGGTKSDVASEDLIVEEDITKAVEKRID 1040
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,121,876
Number of Sequences: 5004
Number of extensions: 65969
Number of successful extensions: 305
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 345237368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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