Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30a10
         (732 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   2.2  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    22   5.2  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    22   5.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   6.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.0  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   9.0  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/35 (22%), Positives = 21/35 (60%)
 Frame = +1

Query: 331  LLGTGEDHHGHQQTRHAGPRSAEARKIGQENRNTP 435
            ++ +G+ H G  Q+ +A P++ + + + +  +N P
Sbjct: 923  IVASGQQHAGGWQSIYAQPQTVQDQIVSEYYQNKP 957


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 686 CSPVCSPAFCCRLLYGR 636
           C  +C+P   CRL Y R
Sbjct: 63  CIKICAPGCVCRLGYLR 79


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 686 CSPVCSPAFCCRLLYGR 636
           C  +C+P   CRL Y R
Sbjct: 63  CIKICAPGCVCRLGYLR 79


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 113 KS*HRAVKPQPSRAKSFLYQEV 48
           K  HRA++P+P  A+  + Q +
Sbjct: 629 KKKHRAIRPEPIDAQFDIIQNI 650


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 598 GPDGEESCLRADV 560
           G DG+ES  RAD+
Sbjct: 202 GNDGDESSCRADI 214


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -3

Query: 592 DGEESCLRADVAQVRAVESI*KLHDRLVVHLAVLGDRRR 476
           DGE SC R    + +      +LH+    HL     RRR
Sbjct: 248 DGERSCSRDRSREYKKDRRYDQLHNVEEKHLRERTSRRR 286


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,129
Number of Sequences: 438
Number of extensions: 4936
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)