Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30a06
         (780 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    25   3.5  
AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein ...    24   4.6  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   8.0  

>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -1

Query: 537 SKNQFGNQNETYNHHLPHNFH*VKC 463
           SK +F  QN     HLPH  H  KC
Sbjct: 351 SKRKFSQQNCCEQQHLPH-VHSEKC 374


>AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein
           protein.
          Length = 168

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 114 RGGDGDHGISTANESSSSMPDPTEGHQNIS 203
           RGGDG    ST N  ++S   P  G  + S
Sbjct: 26  RGGDGSSANSTGNSDNNSAGVPDFGFNSQS 55


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 450  LKELYTLLNENYVEDDDCMFRFDYQTDFLKWALQPP 557
            L+ELY LLN +  +D+  +  +  + D +KW   PP
Sbjct: 1505 LRELYKLLNSDTHQDE--VVGWCAERD-MKWKFTPP 1537


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 804,483
Number of Sequences: 2352
Number of extensions: 17646
Number of successful extensions: 43
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)