Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2p21
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           23   2.5  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   4.4  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   5.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.8  

>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 4   VISRMSENNL*LKFSKSIMDTTPSTENNKREQSTVS 111
           VIS  +EN L  +   ++MD     E  +  +ST+S
Sbjct: 222 VISLKNENELPQQHKTNVMDVMQWWEQQQTPRSTIS 257


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = -3

Query: 139 TVLNLI-LDSVILYFVLAYYS 80
           T L L  +D+ +L+ VLAYYS
Sbjct: 294 TALRLFTIDNKLLFGVLAYYS 314


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +1

Query: 484 ANFLHSPIPTDHNISIEVSHRNYNGSVRSKSPEQKSPKSL 603
           A F   P+   +N  +       + S  S SPE +SP+SL
Sbjct: 262 APFFRQPLDL-YNFRVPQHQVLQSPSSTSSSPEPRSPESL 300


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -2

Query: 428 LITCKEGCLDECLDVDIACAVGTC 357
           +++CK+  L + + +   C  GTC
Sbjct: 138 MVSCKDAALRKVVPLKKLCNNGTC 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.306    0.121    0.316 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,594
Number of Sequences: 336
Number of extensions: 3386
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)