Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2p17
(742 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071217-1|AAL48839.1| 438|Drosophila melanogaster RE26079p pro... 239 3e-63
AE014296-1426|AAF50439.1| 438|Drosophila melanogaster CG7108-PA... 239 3e-63
X79801-1|CAA56196.1| 438|Drosophila melanogaster DNA polymerase... 236 2e-62
AE014297-4250|AAF56803.1| 2119|Drosophila melanogaster CG10011-P... 31 1.6
AY069771-1|AAL39916.1| 2119|Drosophila melanogaster SD01389p pro... 29 6.6
>AY071217-1|AAL48839.1| 438|Drosophila melanogaster RE26079p
protein.
Length = 438
Score = 239 bits (585), Expect = 3e-63
Identities = 113/233 (48%), Positives = 155/233 (66%), Gaps = 7/233 (3%)
Frame = +1
Query: 64 HNENILSDMLPTYYARQFPQNIFCRWLACGSSPQPL-CNRELSFTLADDVYLRYLSISHQ 240
+N +L DMLP YY R FP F RWL+ GSS + NRE+SFTL DD+Y+RYL Q
Sbjct: 23 YNPEVLQDMLPVYYRRLFPHLPFYRWLSYGSSEDAIFSNREISFTLQDDIYIRYLCFDTQ 82
Query: 241 KDLQTLLQKKCPHKLDVGAVYNTKPSVGRH---DAVVISRELVFDIDLTDYDEIRTCCQE 411
+L+ + + P K+D+G V ++KP R + RELVFDID+TDYDE+RTCC
Sbjct: 83 AELEKEICSRNPIKIDIGPVMHSKPKNHRSIPGGLTPVQRELVFDIDMTDYDEVRTCCSG 142
Query: 412 ARVCEKCWKFMVIACEIIDKALKDDFGFQSILWVFSGRRGIHCWVSDYEARTLDSPGRGA 591
A VC KCWKFMV+A ++D AL++DFGF+ I+W+FSGRRGIHCWV DY+AR LD GR A
Sbjct: 143 AGVCLKCWKFMVLAARVLDVALREDFGFEHIIWIFSGRRGIHCWVCDYQARHLDGRGRYA 202
Query: 592 IADYLCLIVGGE---NQSKKVHLGNENLHSSIRRALNIIDKYFEQLLXDQEFL 741
+A+YL +I S + +G + H S++RAL I++ FE+++ + + L
Sbjct: 203 VAEYLNIITYASFAGGNSPRCSMG-DRPHHSLKRALKIVEPMFEEIVLEDQNL 254
>AE014296-1426|AAF50439.1| 438|Drosophila melanogaster CG7108-PA
protein.
Length = 438
Score = 239 bits (585), Expect = 3e-63
Identities = 113/233 (48%), Positives = 155/233 (66%), Gaps = 7/233 (3%)
Frame = +1
Query: 64 HNENILSDMLPTYYARQFPQNIFCRWLACGSSPQPL-CNRELSFTLADDVYLRYLSISHQ 240
+N +L DMLP YY R FP F RWL+ GSS + NRE+SFTL DD+Y+RYL Q
Sbjct: 23 YNPEVLQDMLPVYYRRLFPHLPFYRWLSYGSSEDAIFSNREISFTLQDDIYIRYLCFDTQ 82
Query: 241 KDLQTLLQKKCPHKLDVGAVYNTKPSVGRH---DAVVISRELVFDIDLTDYDEIRTCCQE 411
+L+ + + P K+D+G V ++KP R + RELVFDID+TDYDE+RTCC
Sbjct: 83 AELEKEICSRNPIKIDIGPVMHSKPKNHRSIPGGLTPVQRELVFDIDMTDYDEVRTCCSG 142
Query: 412 ARVCEKCWKFMVIACEIIDKALKDDFGFQSILWVFSGRRGIHCWVSDYEARTLDSPGRGA 591
A VC KCWKFMV+A ++D AL++DFGF+ I+W+FSGRRGIHCWV DY+AR LD GR A
Sbjct: 143 AGVCLKCWKFMVLAARVLDVALREDFGFEHIIWIFSGRRGIHCWVCDYQARHLDGRGRYA 202
Query: 592 IADYLCLIVGGE---NQSKKVHLGNENLHSSIRRALNIIDKYFEQLLXDQEFL 741
+A+YL +I S + +G + H S++RAL I++ FE+++ + + L
Sbjct: 203 VAEYLNIITYASFAGGNSPRCSMG-DRPHHSLKRALKIVEPMFEEIVLEDQNL 254
>X79801-1|CAA56196.1| 438|Drosophila melanogaster DNA polymerase
subunit A protein.
Length = 438
Score = 236 bits (578), Expect = 2e-62
Identities = 114/233 (48%), Positives = 153/233 (65%), Gaps = 7/233 (3%)
Frame = +1
Query: 64 HNENILSDMLPTYYARQFPQNIFCRWLACGSSPQPL-CNRELSFTLADDVYLRYLSISHQ 240
+N +L DMLP YY R FP F RWL+ GSS + NRE+SFTL DD+Y+RYL Q
Sbjct: 23 YNPEVLQDMLPVYYRRLFPHLPFYRWLSYGSSEDAIFSNREISFTLQDDIYIRYLCFDTQ 82
Query: 241 KDLQTLLQKKCPHKLDVGAVYNTKPSVGRH---DAVVISRELVFDIDLTDYDEIRTCCQE 411
+L+ + + P K+D+G V ++KP R + RELVFDID+TDYDE+RTCC
Sbjct: 83 AELEKEICSRNPIKIDIGPVMHSKPKNHRSIPGGLTPVQRELVFDIDMTDYDEVRTCCSG 142
Query: 412 ARVCEKCWKFMVIACEIIDKALKDDFGFQSILWVFSGRRGIHCWVSDYEARTLDSPGRGA 591
A VC KCWKFMV+A ++D AL +DFGF+ I+W+FSGRRGIHCWV DY+AR LD GR A
Sbjct: 143 AGVCLKCWKFMVLAARVLDVALAEDFGFEHIIWIFSGRRGIHCWVCDYQARHLDGRGRYA 202
Query: 592 IADYLCLIVGGE---NQSKKVHLGNENLHSSIRRALNIIDKYFEQLLXDQEFL 741
A+YL +I S + +G + H SI+RAL I++ FE+++ + + L
Sbjct: 203 EAEYLNIITYASFAGGNSPRCSMG-DRPHHSIKRALKIVEPMFEEIVLEDQNL 254
>AE014297-4250|AAF56803.1| 2119|Drosophila melanogaster CG10011-PA
protein.
Length = 2119
Score = 31.1 bits (67), Expect = 1.6
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +1
Query: 487 FGFQSILWVFSGRRGIHCWVSDYEARTLDSPGRGAIA-DYLCLIVGGENQSKKVHLGNEN 663
F F+ + S R G V+D +A D+ G G +VGG S + G N
Sbjct: 107 FNFRDSNRLASARNGNPVQVTDLDADEDDAQGDGVDGCGSTSALVGGSKYSSQPSAGTAN 166
Query: 664 LHSSIRRALNII 699
H RR LN +
Sbjct: 167 QHLEDRRILNFL 178
>AY069771-1|AAL39916.1| 2119|Drosophila melanogaster SD01389p
protein.
Length = 2119
Score = 29.1 bits (62), Expect = 6.6
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +1
Query: 517 SGRRGIHCWVSDYEARTLDSPGRGAIA-DYLCLIVGGENQSKKVHLGNENLHSSIRRALN 693
S R G V+D +A D+ G G +VGG S + G N H RR LN
Sbjct: 117 SARNGNPVQVTDLDADEDDAQGDGVDGCASTSALVGGSKYSSQPSAGTANQHLEDRRILN 176
Query: 694 II 699
+
Sbjct: 177 FL 178
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,590,184
Number of Sequences: 53049
Number of extensions: 720558
Number of successful extensions: 1743
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1734
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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