Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2p16
         (736 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0035 - 9896289-9896390,9897394-9897503,9897587-9897715,989...    31   0.72 
12_01_0101 - 779047-779298,779459-779711,779857-780005,780033-78...    31   1.3  
11_01_0101 - 738305-738556,738723-738977,739306-739554,739649-73...    31   1.3  
06_03_1036 + 27053480-27053729,27054616-27054704,27054881-270549...    30   2.2  
06_01_0393 + 2831676-2831876,2831986-2832101,2832340-2832421,283...    28   6.7  
03_02_0917 + 12372122-12372422,12372487-12372524,12373103-123731...    28   8.8  

>10_06_0035 -
           9896289-9896390,9897394-9897503,9897587-9897715,
           9898734-9898800,9898888-9898970,9899878-9899959,
           9900049-9900125,9900206-9900289,9900368-9900437,
           9900580-9900668,9900921-9901613,9902833-9903142
          Length = 631

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 500 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 607
           Q CV + +++  +PW  W D+ T    RC ++D KY
Sbjct: 288 QLCVFQVAKESKKPWIWW-DYVTDFHIRCPMKDKKY 322


>12_01_0101 -
           779047-779298,779459-779711,779857-780005,780033-780281,
           780377-780571,780681-780788,780935-781156,781669-781986,
           781988-782615,783059-783135,783161-783267,783491-783619,
           783763-783820,783902-783984,784458-784539,784617-784693,
           784827-784910,784999-785068,785146-785234,785319-786008,
           786485-786797
          Length = 1410

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 500 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 607
           Q CV K +++  +PW  W D+ T    RC +++ KY
Sbjct: 288 QVCVYKVAKEHGKPWL-WWDYVTDFAIRCPMKEKKY 322


>11_01_0101 -
           738305-738556,738723-738977,739306-739554,739649-739843,
           739953-740060,740184-740405,740806-741390,741495-741863,
           742423-742529,742755-742883,743027-743084,743166-743248,
           744115-744196,744274-744350,744477-744560,744649-744718,
           744796-744884,744965-745654,746127-746439
          Length = 1338

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 500 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 607
           Q CV K +++  +PW  W D+ T    RC +++ KY
Sbjct: 288 QVCVYKVAKEHGKPWL-WWDYVTDFAIRCPMKEKKY 322


>06_03_1036 +
           27053480-27053729,27054616-27054704,27054881-27054950,
           27055145-27055228,27055332-27055408,27055519-27055583,
           27055723-27055765,27055889-27055952,27056126-27056254,
           27056522-27056625,27056724-27056828
          Length = 359

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +2

Query: 500 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 607
           Q CV + + +  +PW  W D+   ++ RC +++ KY
Sbjct: 31  QLCVHRVANETGRPWAWW-DYVMDYKIRCSMKEKKY 65


>06_01_0393 +
           2831676-2831876,2831986-2832101,2832340-2832421,
           2832515-2832671,2832755-2832848,2833942-2834008,
           2834464-2835009
          Length = 420

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +2

Query: 461 LVLPALSAEDVSYQACVDKYSRKGYQPWQEWSDHYTCHRYRCEI 592
           + +PA +A   S  AC      +  Q + E S   TCH  RC+I
Sbjct: 266 MTIPAEAASSSSAFACAVAALAEQQQMYGEASSTATCHTSRCDI 309


>03_02_0917 +
           12372122-12372422,12372487-12372524,12373103-12373186,
           12373796-12374504,12374641-12374729,12374834-12374903,
           12374977-12375060,12375097-12375239,12375337-12375418,
           12375605-12375687,12375769-12375835,12376287-12376376,
           12377631-12377737,12377862-12377969
          Length = 684

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +2

Query: 497 YQACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 607
           +Q CV K + +  +PW  W D+      RC +++ KY
Sbjct: 330 HQICVFKAANESGKPWL-WWDYVHDFSIRCPMKEKKY 365


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,074,270
Number of Sequences: 37544
Number of extensions: 319015
Number of successful extensions: 673
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)