Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2p16
         (736 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    27   0.18 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          25   0.74 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      25   0.74 
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    24   1.7  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    23   2.3  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   3.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.9  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 18/64 (28%), Positives = 36/64 (56%)
 Frame = +1

Query: 256 AGFYPATSWLLDKATYFIFLSIQIFEIVAT**GFLMKSIIIILFFFKDGWRPENTTREAV 435
           +G Y A S +    T  I+    ++E+ +T   FL+  +II++ + + G +  N+T++ +
Sbjct: 191 SGNYSADSAMCAMLT--IYADFPLYEL-STIIFFLIPMLIILVVYTRMGLKIRNSTKDTL 247

Query: 436 GSVV 447
            SVV
Sbjct: 248 NSVV 251


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 0.74
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 303 FYIFIHTNF*NRCYLMRVSYEI 368
           FY F+H    NR YL R+S ++
Sbjct: 257 FYFFLHKQVLNRYYLERLSNDM 278


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 0.74
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 303 FYIFIHTNF*NRCYLMRVSYEI 368
           FY F+H    NR YL R+S ++
Sbjct: 257 FYFFLHKQVLNRYYLERLSNDM 278


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -1

Query: 700 PDFVHPTKQ*EKLAVQHPQHDPTISPDSSYEVFPVSDL 587
           P+   PT        + P+H PT    S  EV  +SDL
Sbjct: 363 PNVTLPTSTYSGSPTELPKHLPTSLTKSKMEVMELSDL 400


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 655 QHPQHDPTISPDSSYEVFPVS 593
           +HP  + T+S D   EV P+S
Sbjct: 351 EHPSRNFTMSEDGMIEVIPLS 371


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 97  HFFCFYLNATVQGFNHN 147
           HF C Y NA+V  +N N
Sbjct: 433 HFQCRYPNASVTPYNKN 449


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 656 DRQFLLLFSRVNEVRSTQTLTTKMLPL 736
           DRQ  L+ SR+N   +    T+K LP+
Sbjct: 285 DRQNGLVLSRMNLTLAKMEKTSKPLPM 311


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,133
Number of Sequences: 438
Number of extensions: 3758
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)