Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2p15
(744 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0364 + 2615056-2615239,2615573-2615637,2616016-2616103,261... 33 0.24
02_01_0359 + 2578038-2578221,2578555-2578619,2583179-2583266,258... 33 0.24
02_01_0736 - 5490671-5491813 30 2.2
01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411 30 2.2
04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276 29 2.9
03_05_0145 + 21254448-21255488 29 2.9
05_04_0115 + 18103964-18104263,18105841-18105870,18106167-18106292 29 3.9
01_01_0594 + 4420381-4421898 29 3.9
11_01_0611 - 4894342-4895448 29 5.2
04_04_1548 - 34313212-34313304,34313518-34313632,34314097-343142... 28 6.8
11_06_0284 + 21909758-21913645 28 9.0
02_01_0261 + 1731654-1732793 28 9.0
>02_01_0364 +
2615056-2615239,2615573-2615637,2616016-2616103,
2616202-2616269,2616653-2616703,2617168-2617285,
2617463-2617509,2617603-2617629,2617806-2617881,
2618157-2618296,2618623-2618721
Length = 320
Score = 33.1 bits (72), Expect = 0.24
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +1
Query: 373 PLCAPSQLARARGLADPAALSAHLQNQEGSSSGRAEVSGSTGGNRFIVCELKGIVLGTSA 552
PL P ++ R++ L + S L G+ GR +S S GN+ ++ +LKG + ++
Sbjct: 141 PLIIPDKIQRSKALIECDGDSIDLSGDVGAV-GRIIISNSPNGNQELLLDLKGTIYKSTI 199
Query: 553 NTSEKCC 573
S C
Sbjct: 200 VPSRTFC 206
>02_01_0359 +
2578038-2578221,2578555-2578619,2583179-2583266,
2583365-2583432,2583816-2583866,2584331-2584448,
2584626-2584672,2584766-2584792,2584969-2585044,
2585320-2585483
Length = 295
Score = 33.1 bits (72), Expect = 0.24
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +1
Query: 373 PLCAPSQLARARGLADPAALSAHLQNQEGSSSGRAEVSGSTGGNRFIVCELKGIVLGTSA 552
PL P ++ R++ L + S L G+ GR +S S GN+ ++ +LKG + ++
Sbjct: 141 PLIIPDKIQRSKALIECDGDSIDLSGDVGAV-GRIIISNSPNGNQELLLDLKGTIYKSTI 199
Query: 553 NTSEKCC 573
S C
Sbjct: 200 VPSRTFC 206
>02_01_0736 - 5490671-5491813
Length = 380
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +1
Query: 334 GCSGEPTCLALPDPLCAPSQLARARGLADPAAL 432
GCS E ALPDP+C P L+ A LA P L
Sbjct: 180 GCSWE----ALPDPICFPCVLSPAGYLAPPLIL 208
>01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411
Length = 885
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 428 AAGSARPLARAN*LGAHKGSGNARQVGSPLQPVR 327
AAGSAR L + AH GSG R++ + P R
Sbjct: 366 AAGSARELMSGSRRAAHHGSGQRRELMGTITPQR 399
>04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276
Length = 924
Score = 29.5 bits (63), Expect = 2.9
Identities = 31/127 (24%), Positives = 47/127 (37%), Gaps = 4/127 (3%)
Frame = +1
Query: 157 HKKKSADGNSGAEEGGSKKKDENENQLKRTKSRELRGG---IMYYSCHCIKRNGLQHDCR 327
HKK+ S ++GG K+ +N N + ++ I R+ + DC
Sbjct: 186 HKKQEHTPPSFPQDGGKLKEVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDC- 244
Query: 328 RTGCSGEPTCLALPDPLCAPSQLARARG-LADPAALSAHLQNQEGSSSGRAEVSGSTGGN 504
TG S + DP CA + R G L + AL + S + S T
Sbjct: 245 FTGLSQGYGFVKYSDPRCASEAIKRMNGRLVEGTALKVRVTGFPSSEDNSQQPSKETDMA 304
Query: 505 RFIVCEL 525
+ VC L
Sbjct: 305 KLYVCNL 311
>03_05_0145 + 21254448-21255488
Length = 346
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 163 KKSADGNSGAEEGGSKKKDENENQLKRTKS 252
K+S +GN GA GG+ K+D E +R S
Sbjct: 218 KRSLNGNGGAYGGGAAKRDPGERSGRRPDS 247
>05_04_0115 + 18103964-18104263,18105841-18105870,18106167-18106292
Length = 151
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +1
Query: 421 PAALSAHLQNQEGSSSGRAEVSGS---TGGNRFIVCELKGIVLGTSANTSEKCCKCPNFV 591
PAA++A GSSS SGS GGN F+ +L+ + +S + C V
Sbjct: 55 PAAMAAADNGGHGSSSASQNASGSGQGQGGNMFLSLQLRPLGSTPWGFSSLQIC-----V 109
Query: 592 ATQVSKSEKGSNS 630
++ EKGS+S
Sbjct: 110 KIYLAAMEKGSSS 122
>01_01_0594 + 4420381-4421898
Length = 505
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/25 (52%), Positives = 19/25 (76%), Gaps = 2/25 (8%)
Frame = -2
Query: 521 SQTINLFPPV--EPETSARPDELPS 453
S+++ L+PPV E + +ARPD LPS
Sbjct: 366 SESLRLYPPVPFEHKAAARPDTLPS 390
>11_01_0611 - 4894342-4895448
Length = 368
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +1
Query: 187 GAEE--GGSKKKDENENQLKRTKSRELRGGIMYYSC 288
G EE G ++++++ +L RT+S ELR G+ + C
Sbjct: 305 GEEETKNGKQEQEDDHVELLRTRSGELREGVEMFDC 340
>04_04_1548 -
34313212-34313304,34313518-34313632,34314097-34314287,
34314391-34315379,34315989-34316136,34316349-34316424,
34316946-34317110,34317196-34317286,34318069-34318153,
34318256-34318411,34318479-34318586,34318713-34318811,
34318927-34319036,34319139-34319208
Length = 831
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +1
Query: 349 PTCLALPDPLCAPSQLARARGLADPAALSAHLQNQEGSSS 468
PT LP P PS L G +DP A S+ S +
Sbjct: 517 PTSAVLPSPTSLPSHLREKFGFSDPNANSSSFITSSSSDN 556
>11_06_0284 + 21909758-21913645
Length = 1295
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 160 KKKSADGNSGAEEGGSKKKDENENQLKRTKSRELRGG 270
++K + N G EE G ++ E E + ++ K ++ +GG
Sbjct: 433 ERKEEEKNEGEEENGEEEGKEKELKGRKDKEKKEKGG 469
>02_01_0261 + 1731654-1732793
Length = 379
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 530 PFNSQTINLFPPVEPETSARPDE 462
P Q +NL PPV PE S+RP++
Sbjct: 115 PATRQLVNL-PPVSPEPSSRPND 136
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,270,896
Number of Sequences: 37544
Number of extensions: 447849
Number of successful extensions: 1536
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1533
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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