Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2p15
(744 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 31 0.65
U80837-8|AAB37908.1| 412|Caenorhabditis elegans Hypothetical pr... 31 1.1
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 31 1.1
U29244-13|AAC71083.1| 291|Caenorhabditis elegans Collagen prote... 31 1.1
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 31 1.1
U70856-1|AAB09165.1| 327|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL132860-25|CAB60510.1| 413|Caenorhabditis elegans Hypothetical... 29 3.5
Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical p... 28 6.1
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 28 8.0
U80023-9|AAG24041.1| 257|Caenorhabditis elegans Hypothetical pr... 28 8.0
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 31.5 bits (68), Expect = 0.65
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -2
Query: 497 PVEPETSARPDELPS*FCKCADSAAGSAR 411
PVEP A P +LPS C D A GS R
Sbjct: 235 PVEPSDPAPPSKLPSPSKSCTDLAGGSQR 263
>U80837-8|AAB37908.1| 412|Caenorhabditis elegans Hypothetical
protein F07E5.9 protein.
Length = 412
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +1
Query: 589 VATQVSKSEKGSNSCVCKDNSCKKSPSDVKGGVGSVFKFDENTLNSILKS 738
VA + EK N V K KK+PS +KG GS + + T+ S LKS
Sbjct: 334 VAELLEALEKEMNGAVTKFEHTKKNPSPIKGTCGS--QKNRTTMASDLKS 381
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 30.7 bits (66), Expect = 1.1
Identities = 30/102 (29%), Positives = 36/102 (35%), Gaps = 1/102 (0%)
Frame = +1
Query: 283 SCHCIKRNGLQHDCRRTG-CSGEPTCLALPDPLCAPSQLARARGLADPAALSAHLQNQEG 459
SC C + H C TG C P + C PS L ALS
Sbjct: 737 SCQCNRVGSFGHTCDETGQCKCRPGVAGIKCDHCLPS--FWGIHLIAQGALSCRPCGCSA 794
Query: 460 SSSGRAEVSGSTGGNRFIVCELKGIVLGTSANTSEKCCKCPN 585
S R++ +TG CE K LG +KC CPN
Sbjct: 795 FGSSRSDCEQTTG-----KCECKNGALG------DKCDLCPN 825
>U29244-13|AAC71083.1| 291|Caenorhabditis elegans Collagen protein
74 protein.
Length = 291
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 580 PNFVATQVSKSEKGSNSCVCK-DNSCKKSPSDVKGGVGS 693
P F TQ + G SC C+ DNSC P+ KG GS
Sbjct: 65 PQFNPTQGGEPNPGG-SCNCQADNSCPAGPAGPKGAQGS 102
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 30.7 bits (66), Expect = 1.1
Identities = 30/102 (29%), Positives = 36/102 (35%), Gaps = 1/102 (0%)
Frame = +1
Query: 283 SCHCIKRNGLQHDCRRTG-CSGEPTCLALPDPLCAPSQLARARGLADPAALSAHLQNQEG 459
SC C + H C TG C P + C PS L ALS
Sbjct: 670 SCQCNRVGSFGHTCDETGQCKCRPGVAGIKCDHCLPS--FWGIHLIAQGALSCRPCGCSA 727
Query: 460 SSSGRAEVSGSTGGNRFIVCELKGIVLGTSANTSEKCCKCPN 585
S R++ +TG CE K LG +KC CPN
Sbjct: 728 FGSSRSDCEQTTG-----KCECKNGALG------DKCDLCPN 758
>U70856-1|AAB09165.1| 327|Caenorhabditis elegans Hypothetical
protein F57F4.2 protein.
Length = 327
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 166 KSADGNSGAEEGGSKKKDENENQLKRTKSRELRG 267
+S DG+ G EEG S KK++ N LKR E G
Sbjct: 110 QSRDGDEGEEEG-SDKKEKKGNPLKREHGDEGEG 142
>AL132860-25|CAB60510.1| 413|Caenorhabditis elegans Hypothetical
protein Y56A3A.31 protein.
Length = 413
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 467 LVGLKSPAPLAGTGLLSAN*KASSSEP 547
L G +S APLAG+G+L++N A SS P
Sbjct: 6 LGGAESAAPLAGSGVLASN-SAGSSPP 31
>Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical
protein R107.4d protein.
Length = 817
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 160 KKKSADGNSGAEEGGSKKKDENENQLKRTKSRELRG 267
KK+ +GN G + + ENE Q KR K R+ G
Sbjct: 779 KKRRENGNEGGDNDVCRICCENERQEKREKKRKSSG 814
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/66 (27%), Positives = 25/66 (37%)
Frame = +1
Query: 544 TSANTSEKCCKCPNFVATQVSKSEKGSNSCVCKDNSCKKSPSDVKGGVGSVFKFDENTLN 723
TS N S + C C +T S + S+SC S + GG G +N
Sbjct: 7 TSTNISNRVCSCSPLPSTS-SCGCQASSSCANSCRSTCRPTCSSSGGFGCRMNCQNTCVN 65
Query: 724 SILKSF 741
+ K F
Sbjct: 66 ACNKQF 71
>U80023-9|AAG24041.1| 257|Caenorhabditis elegans Hypothetical
protein F07C4.10 protein.
Length = 257
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/56 (25%), Positives = 23/56 (41%)
Frame = +1
Query: 502 NRFIVCELKGIVLGTSANTSEKCCKCPNFVATQVSKSEKGSNSCVCKDNSCKKSPS 669
N +C + G+ + + C +CP+ AT + + S C S SPS
Sbjct: 171 NDVSICNVVGLQDFVNQYCQKTCARCPSTTATSAVAAAVAAASAPCTTYSPDSSPS 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,901,886
Number of Sequences: 27780
Number of extensions: 369366
Number of successful extensions: 1269
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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